GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:59:46

Sequence gi568815578f:2002873_2217375 : 214503 bp : 44.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  12972  13124  153  2  0   39   41   175 0.610   5.82
 1.02 PlyA +  13178  13183    6                               1.05

 2.05 PlyA -  17032  17027    6                               1.05
 2.04 Term -  17988  17923   66  0  0   98   42    60 0.325   0.34
 2.03 Intr -  19423  19327   97  0  1   90  110     5 0.189   2.91
 2.02 Intr -  24408  24338   71  0  2  104   70    55 0.012   3.28
 2.01 Init -  34811  34665  147  2  0   62   87   102 0.866   7.59
 2.00 Prom -  42632  42593   40                              -5.66

 3.00 Prom +  43492  43531   40                              -7.46
 3.01 Init +  43878  43929   52  2  1   82   74    38 0.735   3.12
 3.02 Intr +  49472  49697  226  0  1   80   15    96 0.005  -1.46
 3.03 Intr +  56368  56437   70  1  1   81  115    27 0.399   3.88
 3.04 Intr +  65110  65130   21  0  0   95  113    11 0.541   2.04
 3.05 Term +  71166  71453  288  2  0  -13   35   471 0.975  27.08
 3.06 PlyA +  71672  71677    6                               1.05

 4.00 Prom +  80318  80357   40                              -3.36
 4.01 Init +  82928  83051  124  1  1   50   89    53 0.400   1.93
 4.02 Intr +  92273  92473  201  0  0  116  103    -9 0.109   2.66
 4.03 Intr +  99999 100493  495  1  0   87   97   717 0.245  65.47
 4.04 Term + 113794 114506  713  2  2   77   38   629 0.954  50.46
 4.05 PlyA + 115178 115183    6                               1.05

 5.19 PlyA - 115472 115467    6                               1.05
 5.18 Term - 116215 116103  113  2  2   25   54    58 0.011  -5.18
 5.17 Intr - 123145 123006  140  0  2   53   80    74 0.447   3.21
 5.16 Intr - 124878 124792   87  2  0  108   71    57 0.660   5.09
 5.15 Intr - 125717 125558  160  0  1   98   82    12 0.501   0.65
 5.14 Intr - 133352 133216  137  1  2   80   52   103 0.050   6.11
 5.13 Intr - 134763 134600  164  0  2   79   36    74 0.395   0.07
 5.12 Intr - 138715 138578  138  1  0   63   50    91 0.034   3.46
 5.11 Intr - 142105 142055   51  1  0   92   98    -1 0.011   0.40
 5.10 Intr - 149753 149735   19  1  1  107   64    24 0.022  -1.49
 5.09 Intr - 152500 152369  132  0  0   66   95    33 0.031   1.56
 5.08 Intr - 159070 158909  162  0  0   89   80    26 0.026   0.99
 5.07 Intr - 159579 159492   88  1  1   52   75    40 0.005  -1.87
 5.06 Intr - 166777 166658  120  2  0   59   21   103 0.012   1.17
 5.05 Intr - 171295 171270   26  0  2  112   98     9 0.631   1.97
 5.04 Intr - 171544 171477   68  1  2   78   95    66 0.491   4.00
 5.03 Intr - 176000 175827  174  2  0  108  109    25 0.532   6.74
 5.02 Intr - 186669 186644   26  1  2   81   94    26 0.056   0.24
 5.01 Init - 198128 198026  103  2  1   51   64   117 0.258   6.00
 5.00 Prom - 199081 199042   40                              -5.86

 6.00 Prom + 201661 201700   40                              -7.86
 6.01 Sngl + 204273 204833  561  2  0  104   44   295 0.964  22.84
 6.02 PlyA + 205444 205449    6                               1.05

 7.03 PlyA - 206000 205995    6                               1.05
 7.02 Term - 208642 208582   61  0  1   97   44    66 0.579   0.38
 7.01 Intr - 209984 209651  334  0  1   70   32   170 0.453   4.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  49472  49734  263  0  2   80   41   156 0.880   5.79
S.002 Init - 135872 135828   45  2  0   89  106    18 0.832   4.38


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_1|50_aa
PQANLSGSIIEEGTVIVGDDSSTRVIAPEHLPLQQDAEVEDSDTDDRDHV

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_1|153_bp
cctcaggcaaatctttcaggaagtattatagaagaaggcactgttatcgtaggagatgac
agctccacacgtgttattgcccctgaacacctcccgctgcaacaagatgcggaagtggaa
gacagtgacactgatgatcgtgaccatgtgtag

>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_2|126_aa
MNPNPCGMDKVQADIGQYSLVVKSMEYGVRETWAHVVALPLTSCVTFSKAQKCLLPLPGL
FLLLVPTPILEQRRGYFHISPQSPAAAYPSQIWSLLATFPAVWAQSTYYMLGAVLGAGEI
PVTEID

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_2|381_bp
atgaatccaaacccttgtggaatggataaagttcaagctgacatagggcagtacagcttg
gtggttaagagcatggagtatggagtcagagagacctgggctcatgtcgtggctttgcca
cttactagctgtgtgacattcagcaaggctcagaagtgcctgctcccactgcctggcctc
ttcctgctcctggtgcccactccaattttggagcaaaggagaggatatttccacatcagc
ccacaatctcctgctgctgcatacccaagtcagatctggagtctcttggccactttccca
gcagtgtgggcccagagcacctactatatgttgggtgctgttctgggcgctggtgaaatt
ccagtgaccgaaatagattaa

>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_3|218_aa
MSWAEGYEKTCDRATWQAETEFNVQDTYLKRPLDQHLMAESDQNRIGQKKKSSYNAGLIT
ALAKPMDSSEARMGLQSCPKLGHDDQALMLLYQCNKHCGNITFQRLDVYSQRFTLKELYG
VLTKNKKEKERKRKKKKEKEEEEQEEEEEKRRGRKKKKKKKKKRKKKKKRRREEKRKKRK
KKKKKKGEEEEEYEEEREEKIIAILNNLSENRSRETIS

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_3|657_bp
atgtcgtgggcggagggctatgagaagacctgtgacagggccacgtggcaagctgagaca
gagtttaatgtgcaggacacttacttaaaaaggcccttggatcaacacttgatggcagag
agtgaccaaaatagaattgggcagaagaagaagtcaagctacaatgcaggtctaataaca
gcactggccaaacccatggacagctctgaagctagaatgggccttcaatcttgtcccaaa
ttgggccatgatgaccaggcccttatgctcctatatcagtgtaacaagcactgtggcaac
attacttttcaaagacttgatgtctattctcaaaggttcacactgaaggagctctatggg
gttctcacgaagaataagaaggagaaggagaggaagaggaagaagaagaaggagaaggag
gaggaggagcaggaggaggaggaggagaaaagaaggggaaggaagaagaagaaaaagaag
aagaagaagaggaagaagaagaagaagagaagaagagaagaaaagaggaaaaagaggaaa
aagaagaagaagaagaaaggagaggaggaggaggaatacgaagaagaaagagaagaaaaa
attatagcaattctcaacaatctctcagaaaatagaagcagagagactatttcctaa

>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_4|510_aa
MPRCYYENSFNLMDALKGLRVPQVTPIAFGDDLSMRALALTRRSSLLSHGTTPRAGCPSG
VLSPLKYRDGSPASALLFCLLTWDGSYLSELQHSRVKGGPMGSSHITDPMETGKDGARRG
TQSPERKRRSPVPRAPSTKLRPAAAARAMDPVAAEAPGEAFLARRRPEGGGGSARPRYSL
LAEIGRGSYGVVYEAVAGRSGARVAVKKIRCDAPENVELALAEFWALTSLKRRHQNVVQF
EECVLQRNGLAQRMSHGNKSSQLYLRLVETSLKGERILGYAEEPCYLWFVMEFCEGGDLN
QYVLSRRPDPATNKSFMLQLTSAIAFLHKNHIVHRDLKPDNILITERSGTPILKVADFGL
SKVCAGLAPRGKEGNQDNKNVNVNKYWLSSACGSDFYMAPEVWEGHYTAKADIFALGIII
WAMIERITFIDSETKKELLGTYIKQGTEIVPVGEALLENPKMELHIPQKRRTSMSEGIKQ
LLKDMLAANPQDRPDAFELETRMDQVTCAA

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_4|1533_bp
atgcctcggtgttattatgagaatagttttaacctcatggatgctttaaagggtctcagg
gtcccccaggtaaccccgatcgcatttggtgatgatttgtccatgcgtgctctggccctt
acaagacgaagctccctgctttcccatggcaccacccccagggctggctgcccctcgggt
gtcctcagccccctgaagtacagagatggatcaccagcctcagccttactattctgcctt
ctcacttgggacggttcttacctatccgagcttcagcactctcgtgtgaaaggagggcca
atggggtccagccacatcaccgaccccatggaaacggggaaggacggcgcccgcagaggt
acacaaagcccggagcggaaaaggcgaagcccagtgccgcgggcgcccagcacgaagctg
aggccggcggcggcggcccgggccatggatccggtggcggccgaggccccgggcgaggcc
ttcctggcgcggcgacggcctgagggcggtggcgggtccgcgcggccgcgttacagcctg
ttggcggagatcgggcgcggcagctacggcgtggtttatgaggcagtggccgggcgcagc
ggggcccgggtggcggtcaagaagatccgctgcgacgcccccgagaacgtggagctggcg
ctggctgaattctgggccctcaccagcctcaagcggcgccaccagaacgtcgtgcagttt
gaggagtgcgtcctgcagcgcaatgggttagcccagcgcatgagtcacggcaacaagagc
tcgcagctttacctgcgcctggtggagacctcgctgaaaggagaaaggatcctgggttat
gctgaggagccctgctatctctggtttgtcatggagttctgtgaaggtggagacctgaat
cagtatgtcctgtcccggaggccagacccagccaccaacaaaagtttcatgctacagctg
acgagcgccattgccttcctgcacaaaaaccatattgtgcacagggacctgaagccagac
aacatcctcatcacagagcggtctggcacccccatcctcaaagtggccgactttggacta
agcaaggtctgtgctgggctggcaccccgaggcaaagagggcaatcaagacaacaaaaat
gtgaatgtgaataagtactggctgtcctcagcctgcggttcggacttctacatggctcct
gaagtctgggagggacactacacagccaaggcggacatctttgccctgggcattatcatc
tgggcaatgatagaaagaatcacttttattgactctgagaccaagaaggagctcctgggg
acctacattaaacaggggactgagatcgtccctgttggtgaggcgctgctagaaaaccca
aagatggagttgcacatcccccaaaaacgcaggacttccatgtctgaggggatcaagcag
ctcttgaaagatatgttagctgctaacccacaggaccggcctgatgcctttgaacttgaa
accagaatggaccaggtcacatgtgctgcttaa

>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_5|635_aa
MRSELSSWDYRKVEEERACGDIRHKDSGADNPIPAQHDEALPQLLTAAPLTLPEDFLQLQ
ELLSLHGPAQKCPGAEGPGSSPWPLKNKRCWIDTTIPLAPQRTVRSLLDPALPVRMESWK
CLESCSWKYFTHSSSHCKELGALKTSPLGPPPPLRSHPGPLDLQSSYEEDSGDAGDMAAN
TVDKNDAPGMWGERQTRSMTRSLPIYYFSIFAPSSATHLCFHSELWAGGGDLLLPVVQVR
QDGQHHGCWEKEDAARSGFAACPELCNTDVHTLPLTNTAGTRPTSLSPLDPSCLEQKFSR
SRMCQMVRCFPIGYVYTEGRHLTFLIGKIGYFNEQEKLAAPIERSRCGVLSGLFHAQWTK
ESFHTAKREGRRNGSTDKWDNTVFSLRVYRTGKMLGKRGARGQRLYNIYNRSFAVLHDNP
EDHRRPSFKGKKTANFGKYICFTWRGSLKSKCGYLEQARPQNVSPESKLGVRGHRASPYP
EDKCTESLSGSQLSQGPRTTSTMELGTRQDRRNGGKGKQWSFRTPEQQEGAMCSLKAFPA
IPVGTLAPKMLRMGFCQGTRTTDTYDAFGSYWSPFLAAGARRWPNDSIPSVLGAFPAADA
EFMKMEKVSDLAYHVTPEPSTYSYGSLNNGLLNDF

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_5|1908_bp
atgaggtcagaactttcaagctgggactaccggaaggtggaggaggagcgagcgtgtggg
gacatcaggcacaaggacagcggtgcagacaaccccatcccagctcagcacgatgaagct
ctgccacagctgctcacggcagcaccactgactctgcctgaggacttcctccagctgcag
gagctgctcagcctgcacgggccagcccagaagtgcccaggagctgagggccctgggagc
agcccttggccactaaagaacaaaaggtgctggatagataccaccattcccctcgctccg
cagaggacagttcgtagcctgctcgacccagctttgcctgtacgtatggagagctggaag
tgcctggaaagctgttcctggaaatacttcacacacagctcatcccactgcaaggagctc
ggggccttgaaaacgtcacccctgggaccaccaccaccattgcggtcacaccctggaccc
ctggacttgcagtcctcatatgaggaggactcaggggatgctggggatatggcagcgaac
acagtggataaaaatgatgcccctggcatgtggggggagagacagacaagaagcatgaca
cgcagcctgcccatctattacttctccatatttgctccctcctctgcaactcacctatgc
tttcattctgagctatgggcaggaggaggtgacctcctgctcccagtggtccaggtccgg
caggatggacagcaccatggctgctgggagaaggaagatgctgccaggtcaggctttgct
gcctgtccagaattatgcaacacagatgtccacacgctacctctcaccaacacagctggg
accagacccacctctcttagccccttagatccctcttgcctggaacaaaagttctcaagg
tcacggatgtgccagatggtccgctgttttcccattggatacgtctatactgagggcagg
cacctaacatttttaataggaaaaatagggtactttaatgaacaagaaaagctggcagct
ccaatagaaaggtccagatgtggggtcttgtctggactcttccatgcccagtggacaaag
gagagcttccacactgccaaacgggagggtcgaaggaatgggagtactgacaaatgggat
aacactgttttcagtcttcgggtatacagaacgggcaaaatgttaggaaaaagaggagca
agagggcagagattatacaacatatacaacaggagcttcgcagtgctccatgacaaccca
gaagaccacaggaggccttctttcaaggggaagaagacggccaactttggcaaatacatc
tgtttcacgtggaggggttccttgaaatccaagtgtggctatttggagcaggcccggcct
cagaatgtgtcccctgagtctaagttaggagtaagaggccacagggcttcaccctatcct
gaagacaaatgcactgagagcctgagcgggagtcagttgtcccagggtcccagaaccaca
tccaccatggaactaggaacacgccaggacagaaggaacgggggaaagggaaaacagtgg
tccttcaggactccagagcagcaggaaggagctatgtgctctctgaaggcttttcctgct
atacctgttggtaccctggcccctaagatgctcagaatgggcttctgccagggcaccagg
accacagacacgtatgatgcctttggctcttattggagccctttccttgcagctggtgcc
agacgctggcctaatgacagcattccctcagtgctgggtgctttcccagctgccgatgca
gaattcatgaagatggagaaagtctctgatttggcttatcatgtcaccccagagcctagc
acatacagttatgggtcgcttaacaatgggctgcttaacgatttctga

>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_6|186_aa
MATAGSQHRRRENEDRSRVTALAFEQPRESLCVLQPPLPFMSEVLSPQRSPQRAFPDAYE
TGSAWAQVEEGPAWPPPRSPWGPCPFRRFSRVLHHGNSGVGSVGCEPSGWGSRRALSASP
REVTQVTGGRRDLRAERGIQKVPGGGFRFLCGVSGWSWLGAAGARWPCASAPGKLSLQGP
GGGRGQ

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_6|561_bp
atggcaactgcaggcagccagcaccgacggcgggaaaacgaggaccggagccgcgttaca
gccttggccttcgagcagcccagggagagtctctgcgtcctccagcccccgcttcccttc
atgtcggaggtcctaagcccgcagcgaagtccgcaaagagctttccccgacgcctacgag
accggaagtgcctgggcccaggtggaggaaggacccgcgtggccgcctccgcgctctccc
tggggtccgtgccccttccggcgtttctcccgcgtccttcaccatggcaactcgggcgtc
gggagcgtgggctgcgagccgagtgggtgggggagccgccgggctctatccgccagccca
cgagaagtgacgcaggtgacgggaggccgcagggacctgagggcggagaggggaattcag
aaagtgccgggcggcggcttccgcttcctctgcggggtctctgggtggtcgtggctggga
gctgccggggcccggtggccgtgcgcctctgctccgggcaagctctccctgcaaggcccg
ggcggcggcagggggcagtag

>gi568815578f:2002873_2217375|GENSCAN_predicted_peptide_7|131_aa
XWNHQDIKIHQLPESEAQPNRNEIFVDANRHYAALAPGIICSSSRSNLCDCGQVTVMRKP
QLKHPPGLRASDITLEQFLLHREKQLNWQTVTVTNVSVNSALHPGAQAQALSCYTSLEVA
TEGQKKESDAL

>gi568815578f:2002873_2217375|GENSCAN_predicted_CDS_7|396_bp
ncatggaaccaccaagacatcaaaatacaccagctgcctgaatctgaagcgcagccaaac
agaaatgagatttttgtggatgctaataggcactatgcagccttagcaccagggatcatt
tgctctagttctagatccaacttgtgtgactgtgggcaagtgactgttatgagaaagcct
cagctaaaacaccctcctggtctcagagcttctgacatcaccctagagcagttcctcctc
catcgtgaaaagcagttgaattggcaaactgtgactgtgacaaatgtctcagtaaacagc
gcccttcatccaggtgcacaggcccaagccttgagctgctacacttctctggaagtggcc
acagagggacaaaagaaggaatctgatgccctgtga