GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:57:26

Sequence gi568815582r:69020428_69221173 : 200746 bp : 46.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13385  13537  153  1  0   81   -9   189 0.722   8.48
 1.02 Term +  13568  14161  594  1  0   -3   44   360 0.369  17.03
 1.03 PlyA +  14952  14957    6                               1.05

 2.00 Prom +  16789  16828   40                              -8.96
 2.01 Init +  19024  19026    3  0  0   93   53     0 0.839  -3.00
 2.02 Intr +  19881  19994  114  2  0  115   78    97 0.981  12.04
 2.03 Intr +  32207  32323  117  1  0   44   36    95 0.033   0.56
 2.04 Intr +  49349  49463  115  1  1   87   32    88 0.026   3.12
 2.05 Term +  62945  63234  290  0  2   58   41   367 0.028  24.54
 2.06 PlyA +  63765  63770    6                               1.05

 3.00 Prom +  68500  68539   40                              -7.06
 3.01 Init +  69083  69272  190  1  1   80  100    96 0.459   7.18
 3.02 Intr +  85238  85360  123  0  0   68   96    61 0.051   5.46
 3.03 Intr +  86943  87139  197  1  2   69   56   118 0.062   5.83
 3.04 Intr +  88969  89604  636  0  0  126  110  1142 0.129 112.49
 3.05 Intr +  93014  93115  102  1  0   92  110   129 0.998  15.87
 3.06 Term +  93916  94839  924  0  0   71   44  1287 0.985 114.78
 3.07 PlyA +  97207  97212    6                               1.05

 4.05 PlyA -  97278  97273    6                               1.05
 4.04 Term - 100222  99998  225  1  0   59   48   237 0.946  13.58
 4.03 Intr - 100743 100626  118  2  1   60   78    87 0.885   5.37
 4.02 Intr - 101066 101009   58  0  1  126  111   -19 0.795   2.14
 4.01 Init - 101718 101682   37  0  1   35   98    20 0.503  -2.13
 4.00 Prom - 104865 104826   40                              -5.86

 5.00 Prom + 106958 106997   40                              -7.66
 5.01 Init + 110446 110493   48  0  0   86   86     3 0.916   0.85
 5.02 Intr + 112028 112262  235  1  1   93  105   107 0.996  10.16
 5.03 Intr + 113031 113191  161  1  2  123  106   138 0.998  18.81
 5.04 Intr + 116269 116460  192  0  0   42   45   145 0.848   5.29
 5.05 Intr + 117374 117458   85  1  1   82   80    89 0.893   6.89
 5.06 Intr + 122751 122962  212  1  2   65   86   196 0.980  15.73
 5.07 Intr + 130110 130281  172  2  1   55   90   145 0.986  10.92
 5.08 Intr + 130386 130477   92  1  2  100  113   103 0.998  13.71
 5.09 Intr + 135444 135566  123  2  0   45  110    26 0.685   1.28
 5.10 Intr + 136696 136813  118  0  1   94   75    30 0.836   2.34
 5.11 Intr + 139929 140035  107  1  2   66  105    64 0.930   5.83
 5.12 Intr + 142656 142751   96  2  0   70  110   118 0.989  12.41
 5.13 Intr + 144914 145099  186  1  0  111   97   113 0.999  14.39
 5.14 Intr + 146648 146758  111  1  0   84   93    34 0.892   4.08
 5.15 Term + 148394 148510  117  1  0   43   41   127 0.931   2.04
 5.16 PlyA + 148574 148579    6                               1.05

 6.00 Prom + 163545 163584   40                              -4.26
 6.01 Init + 166740 167319  580  2  1   47   84  1126 0.785 101.42
 6.02 Term + 180645 180727   83  1  2   94   44    29 0.054  -3.04
 6.03 PlyA + 180731 180736    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:69020428_69221173|GENSCAN_predicted_peptide_1|248_aa
MTEDKEWIPITKLVPLVKDMKIKSLETYLFSLPIEECDIISFFQGASLMGETHTGHRTRF
KAFVTVRDYDGHISLSVKCSKEVTTAIQGTITLAKLSIVPMRRGYWGNKIGKSYTTPCMV
TGCCSSGLVHLIPAPRNNGIISTPVPKMLLLMAGIDNCYTSARGCTATLDNFTKATFNAI
SRTYSCLTPSLWKETIHQASLWNALTITSRPTPEPPCRGPRLQLWLQHKLSYKNNSELHL
LKIISRRK

>gi568815582r:69020428_69221173|GENSCAN_predicted_CDS_1|747_bp
atgactgaggacaaggagtggatacccatcaccaagctggtccctctggtcaaggatatg
aagatcaagtccctggagacctatctcttctccctgcccatcgaggagtgtgatatcatt
agcttttttcaaggggcatctctcatgggtgagacccacactggccaccgcaccagattc
aaggcatttgttactgttagggactatgatggccacatcagtttaagtgttaagtgctcc
aaggaggttactactgccatccaagggaccatcaccctggccaagctttccattgtccct
atgcggagaggttactgggggaacaagatcggcaagtcctacaccaccccctgtatggtt
acaggctgctgtagctctgggctagtacaccttatccctgcccccaggaacaatggcatc
atctcgactcctgtgcccaagatgctgctgctgatggccggtattgacaactgctacacc
tcagccaggggctgcactgccaccctggacaacttcaccaaggccaccttcaatgccatc
tccaggacctatagctgcctgacccccagcctctggaaagagactattcaccaagcctcc
ctgtggaatgcactgaccatcacatcaagacccacaccagagcctccatgcagaggaccc
aggctccagctgtggttacagcataagctttcatacaagaataatagtgaattacacctg
ttaaaaataataagcagaagaaaatga

>gi568815582r:69020428_69221173|GENSCAN_predicted_peptide_2|212_aa
MVTACLIAVAKTDGEVQVRRAAIHVVVLLLRGLSQKATEVEKLAYVGGMKKQSSGFGFKY
GLWSWMSKLKSQLCNLLANIEFLNTTVTRKGVSIPDPKKGILDLAQERIQGESTLQRSLW
MSSQISSGRRRGQFSRTEKCRHSRQAVMAVSLMQVLSAVLKDLYHLLKHVVCLEPDDVAK
LHAQLALEELDDIMKNFLFPPQKLEKKIMVLP

>gi568815582r:69020428_69221173|GENSCAN_predicted_CDS_2|639_bp
atggtaacagcttgcctgattgctgtggccaaaacagatggtgaagttcaagtacgcaga
gctgccatacatgtggttgtgctgctgcttcggggactcagccagaaagctactgaggtg
gaaaaactggcctatgtgggaggtatgaagaaacagtccagtggctttggcttcaagtat
ggactctggagctggatgtccaagctgaaatcccagctttgcaacttgctggcaaatatt
gaatttctaaatacaactgttacaaggaaaggggtctccattccagaccccaagaaaggg
atcttggatctcgcgcaagaaagaattcagggcgagtccacattgcaaagaagtctgtgg
atgtcctcacagatctcctcaggcaggaggagagggcagttcagtcgtactgagaaatgc
cggcacagtagacaggcggtcatggctgtctctctcatgcaggtgctgagcgccgtcctc
aaggatctctaccacctgctgaagcacgtagtgtgtctggagcccgatgacgtggccaag
ctccatgcccagttggccctagaagagctggatgacatcatgaaaaacttcctgttccct
ccacagaagctggagaagaagatcatggtcctgccgtag

>gi568815582r:69020428_69221173|GENSCAN_predicted_peptide_3|723_aa
MLQSHAAATLQCAAPLPAMLHSVGTESPLGGWEPVLLLTIPGAASFLQAELRAVLSALCT
GWQAPLSCQQEGFAALAFGSPLDSELPLRVQKSGKSALSSPSLQGTLCQGSWGTRKSRAW
SDWDPLGFPFLPGWVVGKRHVGVAGAAFAKRRGSSGDEKRGECVRGCFDLMPVQLTTALR
VVGTSLFALAVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLLIQSLFAFLEHRRM
RRAGQALKLPSPRRGSVALCIAAYQEDPDYLRKCLRSAQRISFPDLKVVMVVDGNRQEDA
YMLDIFHEVLGGTEQAGFFVWRSNFHEAGEGETEASLQEGMDRVRDVVRASTFSCIMQKW
GGKREVMYTAFKALGDSVDYIQVCDSDTVLDPACTIEMLRVLEEDPQVGGVGGDVQILNK
YDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNSLLQQFLEDWYHQKFLGS
KCSFGDDRHLTNRVLSLGYRTKYTARSKCLTETPTKYLRWLNQQTRWSKSYFREWLYNSL
WFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRIWNILLFLLTVQLVGIIKATYACFL
RGNAEMIFMSLYSLLYMSSLLPAKIFAIATINKSGWGTSGRKTIVVNFIGLIPVSIWVAV
LLGGLAYTAYCQDLFSETELAFLVSGAILYGCYWVALLMLYLAIIARRCGKKPEQYSLAF
AEV

>gi568815582r:69020428_69221173|GENSCAN_predicted_CDS_3|2172_bp
atgctgcagtcacatgcagcagccacactgcagtgcgcggcacctctgcctgccatgctc
cactctgttggaactgaatcaccgcttgggggttgggaacctgtgttgctccttacaata
cccggtgctgcctctttcctgcaggcagagctcagggctgtgctcagcgccctctgcaca
ggctggcaagcgcctctttcctgccagcaggaaggttttgctgccttggctttcgggagc
cccctagacagcgaactgccccttcgcgtgcagaagtcggggaagagtgctctcagctcg
ccttccttgcagggcacactttgccaaggtagctggggtaccaggaagagcagggcctgg
tccgactgggatcccttgggttttccgttccttcccggttgggtcgtgggaaagcggcac
gtgggtgtggccggcgccgcctttgccaagaggcgaggctcgagcggggatgagaagcgt
ggcgagtgcgttcgcggctgctttgacctgatgccggtgcagctgacgacagccctgcgt
gtggtgggcaccagcctgtttgccctggcagtgctgggtggcatcctggcagcctatgtg
acgggctaccagttcatccacacggaaaagcactacctgtccttcggcctgtacggcgcc
atcctgggcctgcacctgctcattcagagcctttttgccttcctggagcaccggcgcatg
cgacgtgccggccaggccctgaagctgccctccccgcggcggggctcggtggcactgtgc
attgccgcataccaggaggaccctgactacttgcgcaagtgcctgcgctcggcccagcgc
atctccttccctgacctcaaggtggtcatggtggtggatggcaaccgccaggaggacgcc
tacatgctggacatcttccacgaggtgctgggcggcaccgagcaggccggcttctttgtg
tggcgcagcaacttccatgaggcaggcgagggtgagacggaggccagcctgcaggagggc
atggaccgtgtgcgggatgtggtgcgggccagcaccttctcgtgcatcatgcagaagtgg
ggaggcaagcgcgaggtcatgtacacggccttcaaggccctcggcgattcggtggactac
atccaggtgtgcgactctgacactgtgctggatccagcctgcaccatcgagatgcttcga
gtcctggaggaggatccccaagtagggggagtcgggggagatgtccagatcctcaacaag
tacgactcatggatttccttcctgagcagcgtgcggtactggatggccttcaacgtggag
cgggcctgccagtcctactttggctgtgtgcagtgtattagtgggcccttgggcatgtac
cgcaacagcctcctccagcagttcctggaggactggtaccatcagaagttcctaggcagc
aagtgcagcttcggggatgaccggcacctcaccaaccgagtcctgagccttggctaccga
actaagtataccgcgcgctccaagtgcctcacagagacccccactaagtacctccggtgg
ctcaaccagcaaacccgctggagcaagtcttacttccgggagtggctctacaactctctg
tggttccataagcaccacctctggatgacctacgagtcagtggtcacgggtttcttcccc
ttcttcctcattgccacggttatacagcttttctaccggggccgcatctggaacattctc
ctcttcctgctgacggtgcagctggtgggcattatcaaggccacctacgcctgcttcctt
cggggcaatgcagagatgatcttcatgtccctctactccctcctctatatgtccagcctt
ctgccggccaagatctttgccattgctaccatcaacaaatctggctggggcacctctggc
cgaaaaaccattgtggtgaacttcattggcctcattcctgtgtccatctgggtggcagtt
ctcctgggagggctggcctacacagcttattgccaggacctgttcagtgagacagagcta
gccttccttgtctctggggctatactgtatggctgctactgggtggccctcctcatgcta
tatctggccatcatcgcccggcgatgtgggaagaagccggagcagtacagcttggctttt
gctgaggtgtga

>gi568815582r:69020428_69221173|GENSCAN_predicted_peptide_4|145_aa
MCLKDLEKYLAHTCFHLLFKDRKLMVQIVISSARAGGLAEWVLMELQGEIEARYSTGLAG
NLLGDLHYTTEGIPVLIVGHHILYGKIIHLEKPFAVLVKHTPGDQDCDELGRETGTRYLV
TALIKDKILFKTRPKPIITSVPKKV

>gi568815582r:69020428_69221173|GENSCAN_predicted_CDS_4|438_bp
atgtgtctaaaggacttagaaaagtacctagcacacacttgttttcacttgctttttaaa
gacagaaagctcatggtgcaaattgttatttccagtgcgagggctggaggcctggcagaa
tgggtgctgatggagctacagggggagatcgaggctcgctacagcactggattagctgga
aacctcctgggagacctacattacaccactgagggaatccctgtgctgatcgtggggcat
catatcctgtatgggaaaatcatccacctggagaaaccttttgcagtccttgtcaaacac
actcctggggatcaggactgtgatgagcttggccgcgagactggcacccggtacctggtg
acagcactcatcaaagacaagatccttttcaaaacccgccccaagcccattatcaccagc
gtccccaagaaagtatga

>gi568815582r:69020428_69221173|GENSCAN_predicted_peptide_5|684_aa
MAVVVHQTASGIKFWKPPVPPARGLTCNGGRRARRRAANGRQPNLPPPSPPPRALPAHFR
LCARSTSGAEPESARARGAGAERGEHREGERGAAGMGEFKVHRVRFFNYVPSGIRCVAYN
NQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHESRATEALCWAEGQRLFSAGLNGEIME
YDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVGCEDGSVKLFQITPDKIQFERNFDRQK
SSAVHKMIVDRQYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTLVKSHLIA
NADVQSIAVADQEDSFVVGTAEGTVFHFQLVPVTSNSSEKQWVRTKPFQHHTHDVRTVAH
SPTALISGGTDTHLVFRPLMEKVEVKNYDAALRKITFPHGPENIICSCISPCGSWIAYST
VSRFFLYRLNYEHDNISLKRILFSEDSTKLFVASNQGALHIVQLSGGSFKHLHAFQPQSG
TVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCTVPAYNFPVTAMAIAPNTNNLV
IAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAY
MFCIIDKSLPLPNDKTLLYNPFPPTNESDVIRRRTAHAFKISKIYKPLLFMDLLDERTLV
AVERPLDDIIAQLPPPIKKKKFGT

>gi568815582r:69020428_69221173|GENSCAN_predicted_CDS_5|2055_bp
atggcagttgtggttcaccaaactgcttcagggattaagttctggaagcctcccgtgccc
cccgcccgcggcctgacctgcaatggcggccgccgagcgcggcgccgcgcggccaacggg
cgacaaccgaacctcccgccgccgtcgccgccgccgcgagcactgcctgcgcacttccga
ctatgcgccaggagcacttccggggcagagcctgagagcgcgcgcgcacgtggggccggg
gcggagagaggcgagcaccgggaaggggagcgtggggccgctggaatgggtgaatttaag
gtccatcgagtacgtttctttaattatgttccatcaggaatccgctgtgtggcttacaat
aaccagtcaaacagattggctgtttcacgaacagatggcactgtggaaatttataacttg
tcagcaaactactttcaggagaaatttttcccaggtcatgagtctcgggctacagaagct
ttgtgctgggcagaaggacagcgactctttagtgctgggctcaatggcgagattatggag
tatgatttacaggcgttaaacatcaagtatgctatggatgcctttggaggacctatttgg
agcatggctgccagccccagtggctctcaacttttggttggttgtgaagatggatctgtg
aaactatttcaaattaccccagacaaaatccagtttgaaagaaattttgatcggcagaaa
agcagcgctgttcataagatgattgtggacaggcagtatatgggcgtgtctaagcggaag
tgcatcgtgtggggtgtcgccttcttgtccgatggcactatcataagtgtggactctgct
gggaaggtgcagttctgggactcagccactgggacgcttgtgaagagccatctcatcgct
aatgctgacgtgcagtccattgctgtagctgaccaagaagacagtttcgtggtgggcaca
gccgagggaacagtcttccattttcagctggtccctgtgacatctaacagcagtgagaag
cagtgggtgcggacaaaaccgttccagcatcacactcatgacgtgcgcactgtggcccac
agcccaacagcgctgatatctggaggcactgacacccacttagtctttcgtcctctcatg
gagaaggtggaagtaaagaattacgatgccgctctccgaaaaatcacctttccccacggt
cctgagaacattatctgtagctgtatctccccatgtggaagttggatagcctattctaca
gtttctcggttttttctctatcggctgaattatgaacatgacaacataagcctcaaaagg
attttgttttctgaagattcaacaaagctctttgtagcatcaaatcaaggagctctgcat
attgttcagctgtcaggaggaagcttcaagcacctgcatgctttccagcctcagtcagga
acagtggaggccatgtgtcttttggcagtcagtccagatgggaattggctagctgcatca
ggtaccagtgctggagtccatgtctacaacgtaaaacagctaaagcttcactgcacggtg
cctgcttacaatttcccagtgactgctatggctattgcccccaataccaacaaccttgtc
atcgctcattcggaccagcaggtatttgagtacagcatcccagacaaacagtatacagat
tggagccggactgtccagaagcagggctttcaccacctttggctccaaagggatactcct
atcacacacatcagttttcatcccaagagaccgatgcacatccttctccatgatgcctac
atgttctgcatcattgacaagtcattgccccttccaaatgacaaaaccttactctacaat
ccatttcctcccacgaatgaatcagatgtcatccggaggcgcacagctcatgcttttaaa
atttctaagatatataagcctctactcttcatggatcttttggatgaaagaacactcgtg
gcagtagaacggcctctggatgacatcattgctcagctcccaccacccattaaaaagaag
aaatttggaacctaa

>gi568815582r:69020428_69221173|GENSCAN_predicted_peptide_6|220_aa
MRVAAATAAAGAGPAMAVWTRATKAGLVELLLRERWVRVVAELSGESLSLTGDAAAAELE
PALGPAAAAFNGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRGPAGEAGASPPVRRVRVVK
QEAGGLGISIKGGRENRMPILISKIFPGLAADQSRALRLGDAILSVNGTDLRQATHDQAV
QALKRAGKEVLLEGPPGAWFESRTFRKAIGKQHPGLKVTT

>gi568815582r:69020428_69221173|GENSCAN_predicted_CDS_6|663_bp
atgagggtagctgcggcgactgcggcggctggagcggggccggccatggcggtgtggacg
cgggccaccaaagcggggctggtggagctgctcctgagggagcgctgggtccgagtggtg
gccgagctgagcggggagagcctgagcctgacgggcgacgccgccgcggccgagctggag
cccgctctgggacccgcggccgccgccttcaacggcctcccaaacggcggcggcgcgggc
gactcgctgcccgggagcccaagccgcggcctggggcccccgagcccgccggcgccgcct
cggggccccgcgggtgaggcgggcgcgtcgccgcccgtgcgccgggtgcgggtggtgaag
caagaggcgggcggcctgggcatcagcatcaagggcggccgcgagaaccggatgccgatc
ctcatctccaagatcttccccgggctggctgccgaccagagccgggcgctgcggctgggc
gacgccatcctgtcggtgaacggcaccgacctgcgccaggccacccacgaccaggccgtg
caggcgctgaagcgcgcgggcaaggaggtgctgctggaggggcctccaggggcctggttt
gaaagcagaacattcaggaaagccataggaaaacagcatcctggcttaaaagttaccacc
tga