GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:53:53

Sequence gi568815589r:122141887_122361492 : 219606 bp : 45.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    217    212    6                               1.05
 1.04 Term -   2492   2355  138  2  0  110   43    50 0.702   0.66
 1.03 Intr -   6391   6226  166  0  1   68   93   111 0.900   9.56
 1.02 Intr -  10522  10359  164  1  2  112   66   137 0.991  12.67
 1.01 Init -  17791  17741   51  1  0  103   78    73 0.962   8.96
 1.00 Prom -  18368  18329   40                              -8.16

 2.00 Prom +  21473  21512   40                              -4.36
 2.01 Init +  22696  22761   66  0  0   64  116    41 0.614   5.57
 2.02 Intr +  23832  23932  101  2  2   68   51    19 0.477  -4.89
 2.03 Intr +  24882  25029  148  0  1  114   53   102 0.714   9.54
 2.04 Intr +  27759  27870  112  2  1  126   80   197 0.995  22.65
 2.05 Intr +  32610  32741  132  1  0   80   96   115 0.990  12.12
 2.06 Intr +  46582  46714  133  2  1   64   20   113 0.080   1.80
 2.07 Term +  50170  50329  160  1  1  105   45    67 0.100   1.51
 2.08 PlyA +  52228  52233    6                               1.05

 3.20 PlyA -  52743  52738    6                               1.05
 3.19 Term -  62894  62815   80  0  2  143   50    64 0.915   6.03
 3.18 Intr -  63244  63187   58  1  1   79   56    28 0.555  -2.84
 3.17 Intr -  67831  67728  104  2  2  103   94    98 0.729  11.79
 3.16 Intr -  71894  71720  175  2  1   44   89   185 0.983  13.71
 3.15 Intr -  72183  72088   96  0  0  129   75   197 0.998  22.71
 3.14 Intr -  72550  72397  154  0  1  105   86   125 0.526  14.07
 3.13 Intr -  72883  72832   52  2  1   82   44    30 0.457  -4.03
 3.12 Intr -  75402  75182  221  2  2   78   32   511 0.930  42.45
 3.11 Intr -  78060  77919  142  1  1   46   18   148 0.580   3.01
 3.10 Intr -  78673  78528  146  0  2   23   68    71 0.287  -1.47
 3.09 Intr -  84611  84490  122  2  2  116   96   176 0.987  20.49
 3.08 Intr -  85144  84962  183  1  0  121  100   162 0.977  20.68
 3.07 Intr -  85594  85523   72  1  0  110  101    18 0.958   4.90
 3.06 Intr -  86939  86771  169  1  1  102   99   202 0.551  22.65
 3.05 Intr - 104935 104718  218  1  2   54   89   105 0.673   4.50
 3.04 Intr - 105718 105632   87  1  0  112  102    83 0.979  12.27
 3.03 Intr - 106894 106796   99  1  0   87    7    82 0.388   0.31
 3.02 Intr - 110087 109961  127  1  1  118   91    83 0.982  12.28
 3.01 Init - 119606 119494  113  2  2   32   91    93 0.431   3.78
 3.00 Prom - 119833 119794   40                              -6.16

 4.00 Prom + 119989 120028   40                              -5.96
 4.01 Init + 122630 122769  140  1  2   81   58    89 0.208   4.90
 4.02 Intr + 128978 129189  212  2  2   64   75    78 0.044   2.66
 4.03 Intr + 138557 138712  156  0  0   59   92    74 0.634   4.88
 4.04 Intr + 143283 143401  119  1  2   87   94   111 0.989  11.78
 4.05 Intr + 149863 149954   92  0  2   87  100    75 0.632   7.39
 4.06 Intr + 171341 171500  160  2  1   77   79   199 0.643  17.89
 4.07 Term + 180654 180731   78  2  0  108   48    73 0.884   3.06
 4.08 PlyA + 181155 181160    6                               1.05

 5.05 PlyA - 181715 181710    6                               1.05
 5.04 Term - 200115 200021   95  1  2   15   49   119 0.408  -1.31
 5.03 Intr - 200623 200570   54  2  0   56   80    56 0.405   0.55
 5.02 Intr - 201358 201273   86  0  2   25   89    67 0.571  -0.04
 5.01 Init - 205196 204829  368  2  2   67   43   291 0.557  17.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  53825  53768   58  2  1   48  111    40 0.818   3.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:122141887_122361492|GENSCAN_predicted_peptide_1|172_aa
MPGIVELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEG
KLVNKCALDFFRQIKRHCAEPFTEYWTCIDYTGQQLFRHCRKQQAKFDECVLDKLGWVRP
DLGELSKVTKVKTDRPLPENPYHSRPRPDPSPEIEGDLQPATHGSRFYFWTK

>gi568815589r:122141887_122361492|GENSCAN_predicted_CDS_1|519_bp
atgccggggatagtggagctgcccactctagaggagctgaaagtagatgaggtgaaaatt
agttctgctgtgcttaaagctgcggcccatcactatggagctcaatgtgataagcccaac
aaggagtttatgctctgccgctgggaagagaaagatccgaggcggtgtttagaggaaggc
aaactggtcaacaagtgtgctttggacttctttaggcagataaaacgtcactgtgcagag
ccttttacagaatattggacttgcattgattatactggccagcagttatttcgtcactgt
cgcaaacagcaggcaaagtttgacgagtgtgtgctggacaaactgggctgggtgcggcct
gacctgggagaactgtcaaaggtcaccaaagtgaaaacagatcgacctttaccggagaat
ccctatcactcaagaccaagaccggatcccagccctgagatcgagggagatctgcagcct
gccacacatggcagccgcttttatttctggaccaagtaa

>gi568815589r:122141887_122361492|GENSCAN_predicted_peptide_2|283_aa
MSSVLGELEMSVRGLNSDVQFKTVSPPRTGTASALITVESVLYSASWTISIVPDKMMEGK
AKYILPTETIYVGEMKDGMFHGEGTLYFPSGSQYDAIWENGLAIKGTYTFSDGLHYDEKN
WHYCDGYDRRFYTEILNGLKPAGMAQLTNMDPPRKIPKGYYDCGDGFYNPVTRVVKDYRN
RFLRNAVLIQPSTFANWTTGSRLPGPLRSIVHLQPGIRGQKKQRVNAEAVGKSGETCYKD
EEGGSEMGVTCPKSPSESVAQHRIQACSAPELLLVFAVLPHEP

>gi568815589r:122141887_122361492|GENSCAN_predicted_CDS_2|852_bp
atgagttctgttttaggcgagttggagatgtctgtgagaggtctgaacagtgatgtccag
ttcaagactgtgagccccccgaggacagggaccgcatctgccttgatcactgttgaatct
gtgttgtattcagcaagttggaccatcagcatagtccctgacaaaatgatggagggcaaa
gccaagtacatcctccctaccgaaacaatatatgttggggaaatgaaggatggcatgttt
cacggcgagggaaccctgtacttccccagcggaagccaatacgacgccatttgggaaaac
ggattggccataaagggcacatatacgttctcagatgggctgcactatgatgagaaaaac
tggcattactgcgacggctatgatcggaggttttacacagagatcctcaatggcttgaag
cctgcaggtatggctcaactcaccaatatggacccacctagaaaaatccccaagggctat
tacgattgtggagacggcttctataacccagtcacgagggtagtcaaggactataggaac
cgctttctaagaaacgcagtcttaattcagccttcaacatttgccaactggacaacaggc
tcccgcctgccggggccccttcggtccatcgtccacttgcagccagggattaggggccaa
aagaagcagagggtcaacgcagaggctgtgggaaagtctggtgaaacctgctacaaagac
gaggagggtggctcagagatgggagtgacgtgtccaaaatcacccagcgagtcggtggct
cagcatcggatccaggcttgttcggctccagaactccttctagtctttgctgtgttgcca
catgagccctga

>gi568815589r:122141887_122361492|GENSCAN_predicted_peptide_3|805_aa
MEAETKTLPLENASILSEGSLQEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHK
SGALEGQPRGYCFVNFETKQGFFTLTKHGLHLAECLMDANGAKKVWQDGKYSQEAEQAIQ
CLNGKLALSKKLVVRWAHAQVKWGLEKPACTKICDSFELELKSLALSMVFDQRLSTPLPN
KLPSKESQRLNKTFKLNVQAEKLSSDTLDPSEYFSSLCSHCGCGPPRRSSPRCAPAEPEV
PRPMYWKHENAAPALPEGCRLPAEGGPATDQVMAQPGSGCKATTRCLEGTAPPAMAQSDA
EALAGALDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNL
IWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSFVVSAADFAVSGIQWLRPRSPPG
KESVVLSEPGSISLLAPFVLLTPVLGAWALGPALEIPESAARREDAALPDQPRFLFIHAG
FQLSSSPVQLLRSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEF
GLVEEKVLCRIHYDTMIENLKRAAENAFGVPQFRQQGAQFGTLGLPLEEMGTRGQLLLSP
PGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG
LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSALSDDIHYTPFSSPERARMVTL
HGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKNVGTPSRGYGAASVKSGTEG
HPFSVLTLPALPHLPVGAPQLPLSR

>gi568815589r:122141887_122361492|GENSCAN_predicted_CDS_3|2418_bp
atggaagcagaaaccaaaactcttcccctggagaatgcatccatcctttcagagggctct
ctgcaggaaggacaccgattatggattggcaacctggaccccaaaattaccgaataccac
ctcctcaagctcctccagaagtttggcaaggtaaagcagtttgacttcctcttccacaag
tcaggtgctttggagggacagcctcgaggctactgttttgttaactttgaaactaagcag
ggcttcttcaccctcactaaacatgggttacacttggctgaatgcctcatggatgcaaat
ggggcaaagaaggtttggcaggatggaaagtacagccaggaagcagagcaagccatccag
tgtctcaatggcaagttggccctgtccaagaagctggtggtgcgatgggcacatgctcaa
gtaaagtggggacttgaaaaacctgcctgcacaaagatttgtgacagttttgagttggag
ctgaaatctttagctctaagcatggtttttgatcagaggctctctaccccactccccaac
aaacttcccagtaaagagtcacagagactaaacaagacatttaagctcaatgtccaagct
gaaaaactaagttcagatactttagatccttctgagtatttcagcagcctctgctcccac
tgcggctgtggtccccctcggcgcagctctccgcgctgcgcgcccgctgagcccgaggtt
ccccggcccatgtactggaagcatgagaacgccgccccggcgttgcccgagggctgccgg
ctgccggccgagggcggccccgccaccgaccaggtgatggcccagccagggtccggctgc
aaagcgaccacccgctgtcttgaagggaccgcgccgcccgccatggctcagtctgacgcc
gaggccctggcaggagctctggacaaggacgagggtcaggcctccccatgtacgcccagc
acgccatctgtctgctcaccgccctctgccgcctcctccgtgccgtctgcaggcaagaac
atctgctccagctgcggcctcgagatcctggaccgatatctgctcaaggtcaacaacctc
atctggcacgtgcggtgcctcgagtgctccgtgtgtcgcacgtcgctgaggcagcagaac
agctgctacatcaagaacaaggagatcttctgcaagatggactacttcagtttcgttgtc
tccgccgccgatttcgctgtgtctggaatccagtggctccggcctcgcagcccgcctggg
aaggagtctgtcgttctgtcggagcctggatcgataagcctcctcgcgcccttcgtgctg
ctgactcctgtcctgggagcgtgggcccttggccccgcgctggagattccagaatcagcg
gcccggagagaggacgcggcgctgccagaccagccccgcttcctgttcatccatgcggga
ttccagctttcctcgtcgccagtccagttgctccgcagccgattcgggaccaagtgtgcc
cggtgcggccgacagatctacgccagcgactgggtgcggagagctcgcggcaacgcctac
cacctggcctgcttcgcctgcttctcgtgcaagcgccagctgtccactggtgaggagttc
ggcctggtcgaggagaaggtgctctgccgcatccactacgacaccatgattgagaacctc
aagagggccgccgagaacgcctttggtgtcccccagtttcgccagcagggagcccagttt
gggacattagggctgccactagaagagatggggacgcgtggtcagctgcttctatcgccc
ccagggaacggcctcacgttggagggggcagtgccctcggaacaggacagtcaacccaag
ccggccaagcgcgcgcggacgtccttcaccgcggaacagctgcaggttatgcaggcgcag
ttcgcgcaggacaacaaccccgacgctcagacgctgcagaagctggcggacatgacgggc
ctcagccggagagtcatccaggtgtggtttcaaaactgccgggcgcgtcataaaaagcac
acgccgcaacacccagtgccgccctcgggggcgcccccgtcccgccttccctccgccctg
tccgacgacatccactacaccccgttcagcagccccgagcgggcgcgcatggtcaccctg
cacggctacattgagagtcaggtacagtgcgggcaggtgcactgccggctgccttacacc
gcaccccccgtccacctcaaagccgatatggatgggccgctctccaaccggggtgagaag
aacgttggaactccctcacggggctatggtgcggcttccgtgaaatcaggcacagaaggt
catcctttttcagtactaacgctgccggcacttccgcatctgcccgtgggcgccccacag
ctgcccctcagccgctga

>gi568815589r:122141887_122361492|GENSCAN_predicted_peptide_4|318_aa
MPGTLASRFLAANSYRRRVITRIVISGPATGQSGAGPEMQSCEGGLLGCFQGLSSVMALG
LKCFRMVHPTFRNYLAASIRPVSEVTLKTVHERQHGHRQYMAYSAVPVRHFATKKAKAKG
KGQSQTRVNINAALVEDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTA
DGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQ
VTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDTVSEDTIRLIEKQISQMADD
TVAELDRHLAVKTKELLG

>gi568815589r:122141887_122361492|GENSCAN_predicted_CDS_4|957_bp
atgcctggaaccctggcttcccgatttctggctgcgaattcctacaggcgaagggtcatt
actcggattgttatttccgggccagcgacaggacaatccggggcggggcctgagatgcag
tcctgcgagggcggcctccttggatgtttccaaggattgtcttcagtcatggccttggga
ttaaagtgcttccgcatggtccaccctacctttcgcaattatcttgcagcctctatcaga
cccgtttcagaagttacactgaagacagtgcatgaaagacaacatggccataggcaatac
atggcctattcagctgtaccagtccgccattttgctaccaagaaagccaaagccaaaggg
aaaggacagtcccaaaccagagtgaatattaatgctgccttggttgaggatataatcaac
ttggaagaggtgaatgaagaaatgaagtctgtgatagaagctctcaaggataatttcaat
aagactctcaatataaggacctcaccaggatcccttgacaagattgctgtggtaactgct
gacgggaagcttgctttaaaccagattagccagatctccatgaagtcgccacagctgatt
ttggtgaatatggccagcttcccagagtgtacagctgcagctatcaaggctataagagaa
agtggaatgaatctgaacccagaagtggaagggacgctaattcgggtacccattccccaa
gtaaccagagagcacagagaaatgctggtgaaactggccaaacagaacaccaacaaggcc
aaagactctttacggaaggttcgcaccaactcaatgaacaagctgaagaaatccaaggat
acagtctcagaggacaccattaggctaatagagaaacagatcagccaaatggccgatgac
acagtggcagaactggacaggcatctggcagtgaagaccaaagaactccttggatga

>gi568815589r:122141887_122361492|GENSCAN_predicted_peptide_5|200_aa
MRASCPPGRAAARSLPALRPPGNDSSPGPPRGYTGSRPGRRTGPPTEGRRARVRGDLATG
KRQRAGGRHVFRRAHKPSAGRTPCNMRVCAMHLSLHCTLHVPHTAALPAPTSTCCFHTWW
LSGGEKVALGFTAGGQEIIVDTKPKRPLLGPEEYAHGPGIPGDHSLEEGGSSSLNHKIEI
QKASVTKKVFHRSDATSDLD

>gi568815589r:122141887_122361492|GENSCAN_predicted_CDS_5|603_bp
atgcgcgcttcctgcccgcccggccgggccgcggcccgctcactccccgccctgcggccg
ccgggaaatgacagcagcccgggaccgccgcgcgggtacacggggtcgcgccccgggaga
cggacggggccgcccaccgagggccgccgggcgagggtgcgaggtgacctagcgacgggc
aagcggcagcgggcaggcggccgtcatgtattcaggcgcgcgcacaagccttctgccggt
cgcaccccttgtaacatgcgtgtctgtgccatgcacctaagtctccactgcacgctgcac
gtgccccacacagccgcattgcctgcgccgacatccacgtgttgcttccacacgtggtgg
ctgagtgggggagagaaggtggcccttggcttcacggctggtggccaggaaattatagtc
gacaccaaaccaaagcggcctcttctagggccagaagaatatgcacatggccccggcatt
cctggagaccacagtctggaggagggaggctcatcatcccttaaccacaagattgaaatt
caaaaagcttcagtgaccaaaaaggttttccacaggtctgatgccacatctgacctggac
taa