GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:53:18

Sequence gi568815596r:68080966_68317132 : 236167 bp : 38.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    309    350   42  2  0   75   84    66 0.785   3.37
 1.02 Intr +   2303   2360   58  1  1  108  101    13 0.234   2.14
 1.03 Intr +  11543  11756  214  0  1  120   43    59 0.376   1.45
 1.04 Intr +  11934  12104  171  0  0   82   76    40 0.308   0.34
 1.05 Intr +  13818  14004  187  0  1   47   98   124 0.588   8.07
 1.06 Term +  14087  14167   81  1  0   95   48    64 0.592  -0.19
 1.07 PlyA +  14853  14858    6                               1.05

 2.20 PlyA -  15148  15143    6                               1.05
 2.19 Term -  22847  22698  150  2  0    1   49   135 0.199  -2.17
 2.18 Intr -  29465  29362  104  0  2   58  100    97 0.354   6.87
 2.17 Intr -  30522  30451   72  1  0  107   73    66 0.537   5.46
 2.16 Intr -  31732  31588  145  1  1   28   60   144 0.540   4.53
 2.15 Intr -  33430  33342   89  2  2   45   52    97 0.297   0.57
 2.14 Intr -  35464  35364  101  0  2   70   69    55 0.433   0.63
 2.13 Intr -  35978  35847  132  1  0    5   56   152 0.302   2.54
 2.12 Intr -  38727  38621  107  0  2   86   50    84 0.105   2.49
 2.11 Intr -  50480  50312  169  1  1   91   93   152 0.314  15.03
 2.10 Intr -  53834  53737   98  2  2   89   86    52 0.966   2.99
 2.09 Intr -  56468  56334  135  2  0  104   94    55 0.991   7.54
 2.08 Intr -  57892  57777  116  2  2   62   55    88 0.988   2.15
 2.07 Intr -  60830  60729  102  0  0   57   27   116 0.731   1.63
 2.06 Intr -  63750  63620  131  2  2   41  101   137 0.944   9.72
 2.05 Intr -  66602  66502  101  2  2   48   95    81 0.547   2.79
 2.04 Intr -  76536  76296  241  2  1   44   90   336 0.019  26.03
 2.03 Intr -  76729  76545  185  1  2   36  -33   221 0.034   2.46
 2.02 Intr -  77192  76831  362  0  2   94   56   245 0.029  15.91
 2.01 Init -  85917  85788  130  0  1   62    4   192 0.121   8.56
 2.00 Prom -  97788  97749   40                              -3.65

 3.12 PlyA -  97911  97906    6                               1.05
 3.11 Term - 100045  99998   48  1  0  119   41    38 0.437  -1.47
 3.10 Intr - 105687 105503  185  1  2   85   87   193 0.932  17.49
 3.09 Intr - 106349 106290   60  0  0   58   78    77 0.737   1.49
 3.08 Intr - 107725 107549  177  2  0   89  116   205 0.998  22.37
 3.07 Intr - 136166 136127   40  2  1  137   93    -4 0.003   1.88
 3.06 Intr - 147036 146941   96  0  0   65   60   116 0.742   5.79
 3.05 Intr - 163909 163821   89  2  2   86   73   112 0.798   8.27
 3.04 Intr - 171261 171160  102  1  0   -4   81   146 0.241   3.93
 3.03 Intr - 171721 171532  190  1  1   42   73    82 0.055   0.34
 3.02 Intr - 172172 172023  150  2  0   81    4   116 0.031   1.94
 3.01 Init - 180265 180224   42  1  0   42  111    31 0.517   1.27
 3.00 Prom - 209580 209541   40                              -2.45

 4.05 PlyA - 209795 209790    6                               1.05
 4.04 Term - 213061 212897  165  1  0   73   48   104 0.292   1.83
 4.03 Intr - 219336 219256   81  0  0   46   85    61 0.222   0.52
 4.02 Intr - 225979 225843  137  2  2   -8  110    73 0.166  -0.73
 4.01 Init - 230639 230549   91  2  1   82   80    47 0.402   2.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  77415  77564  150  2  0   97   86    80 0.916   8.14
S.002 Intr +  80718  80801   84  2  0   80  105    84 0.919   8.40
S.003 Intr +  81300  81360   61  2  1   67  101    37 0.883   0.29
S.004 Term +  81581  81702  122  0  2   77   42    70 0.842  -1.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:68080966_68317132|GENSCAN_predicted_peptide_1|250_aa
MTSFLPLSCLFLCLMGPSSYRKTISGLSLILRYGKNNVCESLIFKIMSLDIIPVRVVYRK
QQKITLADLSREKHVLLCCSIAQGISTVLEPGLEKEARQGKLGSSSQFKGNSRYIHLVKP
GSHTCILAAREAKKCVEFSAPKVGVKQLKKERRFPLRCDKRSCQEPRASSLVSSSRNLRE
SRRDPGHWHWQNVAGVAACSTEVAWRVRPIRKSCGWKEFVHKGQQANAHEASDYEVGQIE
LTQFFSSLQA

>gi568815596r:68080966_68317132|GENSCAN_predicted_CDS_1|753_bp
atgacctcttttctgcctctctcgtgtctttttctgtgcctgatgggaccatctagttac
aggaaaacaatctcagggctctcactgattctacgttatggtaagaataatgtatgtgag
agtcttatattcaagataatgagtttggatattataccagtcagagttgtttaccgcaag
caacagaaaataactctagctgatttaagcagagaaaagcatgtgttgctgtgttgttca
atagctcaaggcatttcaacagtgttggaaccaggcttagaaaaggaggccagacaaggg
aagctaggcagcagctcccagttcaaaggcaatagcaggtacatccatttagtcaagcct
gggtcacatacctgcatcctagctgcaagggaggctaaaaaatgtgtggagttttcagct
cctaaagtgggagtcaagcagctaaaaaaagagagacggtttccactgagatgcgacaaa
cggagctgccaagagcccagggcctcaagccttgtgagcagctccaggaatctcagggaa
tcgagaagagacccaggacactggcattggcaaaatgttgctggtgtggccgcgtgtagc
actgaagtggcctggagggtgcggcccattcggaagagctgtggctggaaagagtttgta
cataagggacagcaagcaaatgcacatgaagccagtgactatgaagtcggtcagattgaa
ttgactcagtttttctcaagtcttcaagcgtga

>gi568815596r:68080966_68317132|GENSCAN_predicted_peptide_2|889_aa
MPEELTEDDLMEVSASEAVPGDEEDDVEAAVSENKVTLDNLAEGSQPHTRSPSPQRGGKT
GLFAGLASSVSMRPASPPSPAADSCSACRFFARRPPLRVTWVKPSSALALCVSISDSIPG
NLKALPAETRAQLHHAEASLSQPPLQLRPFPKTSQAGDLQDLGPYVCVRKAVGKGDKQIR
AVVKEHSVRSQERIWHYPGITTANMPGHLGQNTESGRDKLPMFGVWLPFLGALGVAVAVA
EIGCTMSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD
LKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN
AIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA
YNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK
FHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR
SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTEPILITAHNK
DCISQSPYQQGVDTVEHEDGPVVQRGSECCNLEVPRDTAFQEAAVTGISTRDFLPGFDLT
YPWELLTQSLSFYMAHPNWKHTGKRILGNVIQPRQVGIYKANSDLWTSHSTFAGLYLQPE
KRAVESLPVKRDKGGVSEVKTEASGNPEGQALTHEACFTPNRQSPSKEAVQIHMPVVPPT
SGKAGFGVELGTYLSGTIYNTHHQQDDFMVHDDCKDLAIKPLRRFEEGIKIEGWKVAHLP
GSNQDSQLDEIKSANIPSRKIWMLMGSEWVVKIPPLELGFPIINERIVG

>gi568815596r:68080966_68317132|GENSCAN_predicted_CDS_2|2670_bp
atgccagaggaattaacagaagacgacttgatggaggtgagtgcttctgaagcagtgccg
ggtgatgaggaagatgatgtagaagcagcagtgtcagaaaacaaggtgacattagacaat
ttggcagaagggtcccagccacataccaggagcccgtccccacagaggggtgggaagacg
ggcctcttcgccggcctggcctcctctgtgtccatgcggcccgcatccccgccctctcct
gctgcggacagctgttcagcctgtcgtttcttcgcccgtcggccacccttgcgggtgacc
tgggtaaagccctcctctgccctggcgctctgcgtttccatttcggattccatccccgga
aatcttaaagcgctgccggctgaaacacgtgcgcagctgcaccacgcagaagccagcctc
agccaaccacccctgcagctccgcccctttcctaaaacgtcacaggccggggacctgcag
gatttggggccgtatgtatgtgtgcgaaaggcagtgggtaaaggcgataaacaaattcgt
gctgttgtgaaggaacattctgtgcgatcgcaggagcgcatctggcattatccggggata
actacagccaacatgccagggcatctggggcagaatacggaaagcgggagggacaaattg
ccaatgtttggagtctggttgccgtttttgggggctctgggtgtggcggttgccgtagct
gaaattggctgcaccatgtcggccttcgagaagcctcagatcatcgcccatatccagaag
ggcttcaactacacggtgtttgactgtaagtgggtgccctgcagcgccaaatttgtgacc
atgggcaacttcgcacggggcaccggcgtcattcagctgtacgagatccagcacggggac
ctgaagctgcttcgggagattgaaaaggccaaacctattaaatgtggaacatttggtgca
acatctttacagcagagatatttagctactggagattttggtggaaaccttcatatatgg
aatttagaagctccagagatgccagtatattctgtaaagggccataaagaaattataaat
gccatagatggcataggtggactaggaattggagaaggagcacctgaaattgtgactggc
agccgagatggaactgtgaaggtgtgggacccaaggcaaaaagatgatcctgttgctaat
atggaacctgtacaaggagaaaacaagagagactgttggactgtggcatttggcaatgct
tataatcaagaagaacgtgttgtttgtgctggctatgacaatggggatatcaaactattt
gatctcagaaatatggcattacggtgggagacaaacatcaaaaatggggtgtgtagcttg
gagtttgacagaaaagacataagtatgaataagttagtagccacatctctggaaggaaag
ttccatgtttttgacatgagaacacagcatccaaccaaaggttttgcctctgtttcagaa
aaggctcataaatctactgtgtggcaggtccgacacctgccgcagaacagggagctcttt
ctgacagctggaggcgccggcggccttcacctctggaagtatgaataccctattcagcgg
tcaaagaaagattctgagggaatagaaatgggagtcgcaggttctgtaagccttctgcag
aatgttacgttgtccacccagcccatttcaagtttggattggagtccagataaaaggggt
ctctgcgtctgtagttcatttgaccaaacggagcccattttaatcacagcacataataaa
gactgtatctcccagtctccctatcagcaaggtgtggacactgtggagcatgaggatggg
cctgtcgtccagaggggctctgaatgctgcaatttagaggttccacgtgacactgccttc
caggaagcagccgtaacaggaatcagcactagggatttcttaccaggatttgatcttacc
tacccatgggagctgctgacacagtctctgagcttctacatggcccaccctaactggaaa
catacaggaaagcgaattctgggaaatgtaattcagcctcgccaggttggcatttataaa
gccaactcagatctttggacaagtcattccacctttgcaggcctctacctgcaacccgaa
aaacgggcggtggagagtctgccagtcaaacgggataagggaggagtctctgaagtcaag
acggaagccagtggaaacccagagggtcaggcactgactcacgaggcctgcttcacaccc
aataggcaaagcccctcaaaagaagccgttcagatccacatgcccgtggtgccccccacc
tcaggaaaagcgggatttggtgtggaactcggaacttacttgtcaggcactatctacaac
acccatcaccagcaggatgatttcatggttcatgatgactgcaaggaccttgccatcaaa
ccactgagaaggtttgaagaaggaataaagatagaagggtggaaagtggcacatcttcca
ggctccaaccaggatagtcaattggatgaaataaaatcagcaaatatcccctctaggaag
atttggatgctgatgggatctgaatgggttgtgaaaatccctcctttggagcttggattc
ccaataattaatgaacgtatagttggctag

>gi568815596r:68080966_68317132|GENSCAN_predicted_peptide_3|392_aa
MYRQISSRKVGTEQMGLRVLHRGDSSPDGPCNSVVDPSRYTDAQIPLTASRRTWIFPVFW
CGIRRSPTRARQSAAALAAQRGAQVPGCAALAEAPPPPRALQHSAFPSLSALPFFRALRL
RVSASRCRPQLGRRRRFLRASLSATLLRASEPASRRPAEQNDTWYMVDVKYYLKEYVKWN
KGKGAYRTLKARSAESSSQCSNAGKEYKGIQIGKKKNGSRLQMGNEASYPLEMCSHFDAD
EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG
VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII
NADKDGDGRISFEEFCAVVGGLDIHKKMVVDV

>gi568815596r:68080966_68317132|GENSCAN_predicted_CDS_3|1179_bp
atgtatagacaaatttcctcaagaaaagtgggcactgaacagatgggcctgcgggtgctg
caccggggtgacagcagtcctgatgggccgtgcaattctgtagtggatccaagtcggtac
acggatgcacagatacctttgactgcctctcgcaggacttggatttttcctgttttttgg
tgcggcatccggcgttccccaaccagagctcgccagagcgccgcggcactcgccgcccag
cggggcgcgcaggttcccggatgtgcggcgctcgcggaagccccgcccccgccccgcgcg
ctgcagcactccgctttcccctccctctccgccctccccttttttcgtgccttgaggttg
cgggtcagcgcgagccgctgcaggccgcagctgggccgccgccgccgtttcctgcgagcc
agcctgagcgcaacacttctccgagccagcgagccagcgagccgccgacccgccgagcaa
aatgatacttggtatatggtagatgttaagtactatttgaaggagtatgtgaagtggaat
aaaggaaaaggtgcttatcggacattgaaggcacgtagtgctgaaagttctagtcagtgc
agtaatgcaggaaaagaatataaaggcatacagattggaaagaagaaaaacggatcccgt
ttgcagatgggaaatgaggcaagttatcctttggaaatgtgctcacactttgatgcggat
gaaattaaaaggctaggaaagagatttaagaagcttgatttggacaattctggttctttg
agtgtggaagagttcatgtctctgcctgagttacaacagaatcctttagtacagcgagta
atagatatattcgacacagatgggaatggagaagtagactttaaagaattcattgagggc
gtctctcagttcagtgtcaaaggagataaggagcagaaattgaggtttgctttccgtatc
tatgacatggataaagatggctatatttccaatggggaactcttccaggtattgaagatg
atggtggggaacaatctgaaagatacacagttacagcaaattgtagacaaaaccataata
aatgcagataaggatggagatggaagaatatcctttgaagaattctgtgctgttgtaggt
ggcctagatatccacaaaaagatggtggtagatgtgtga

>gi568815596r:68080966_68317132|GENSCAN_predicted_peptide_4|157_aa
MGFCHVGQAGLELLASQDPPTLSSQRAQITAFPSVPNQKGILQVLEWPSVLFGVIVNDSI
RESDFLQKIHNAIPLRSPDWLKLKGLAMPSVGEDIEQLKFSLLFTDIGTFETVWQVKFYN
YHKRDHCQWGSPFSVIEYECKPNETRSLMWVNKESFL

>gi568815596r:68080966_68317132|GENSCAN_predicted_CDS_4|474_bp
atgggcttttgccatgttggccaggctggtctcgaactcctggcctcacaagatccgccc
accttgtcctctcaaagggctcagattacagccttcccctctgtgcccaaccaaaaagga
attctacaggtacttgaatggccttctgtcctgtttggtgtgattgtaaatgacagtatt
cgagaatctgactttcttcaaaaaatacataatgcaatacccttaaggtcaccagactgg
ctaaaattgaaaggactggcaatgccaagtgttggagaggatatagagcaattgaaattc
tcattgctgttcacagacattgggaccttcgagacagtgtggcaagtcaagttctacaat
taccacaagcgggatcactgccagtggggaagccccttctctgtcattgagtatgaatgc
aagcccaacgagacacgcagtctgatgtgggtgaacaaggagtccttcctctga