GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:49:52

Sequence gi568815589f:123912349_124132704 : 220356 bp : 48.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1755   1860  106  2  1   71   22   132 0.471   5.28
 1.02 Intr +  57775  57893  119  2  2  104   81    12 0.012   2.28
 1.03 Term +  64329  64439  111  2  0  118   55    49 0.065   3.16
 1.04 PlyA +  64718  64723    6                               1.05

 2.00 Prom +  67439  67478   40                              -4.26
 2.01 Init +  77970  78027   58  2  1   15   84    49 0.079  -1.33
 2.02 Intr +  85764  85970  207  1  0   83   82    66 0.450   4.55
 2.03 Intr +  87817  87901   85  2  1   97  116    15 0.087   4.08
 2.04 Intr + 100015 100120  106  1  1   61   78   254 0.089  21.92
 2.05 Intr + 101613 101815  203  2  2  117   68   422 0.999  41.18
 2.06 Intr + 102774 103177  404  0  2   98  105   558 0.970  52.57
 2.07 Intr + 108751 108956  206  2  2   97   76   377 0.815  36.32
 2.08 Term + 120072 120359  288  2  0  143   39   198 0.999  15.78
 2.09 PlyA + 120931 120936    6                               1.05

 3.13 PlyA - 124496 124491    6                               1.05
 3.12 Term - 126110 126028   83  0  2   64   44    75 0.538  -1.44
 3.11 Intr - 126732 126561  172  0  1   88   70    84 0.872   6.12
 3.10 Intr - 130235 130120  116  0  2   82   94    99 0.856  10.07
 3.09 Intr - 140284 140170  115  1  1   55   90    13 0.005  -1.78
 3.08 Intr - 148885 148754  132  1  0   91   94     6 0.071   2.34
 3.07 Intr - 149540 149436  105  2  0  114   78   -19 0.049   0.11
 3.06 Intr - 166435 166349   87  1  0  114   92    11 0.328   4.27
 3.05 Intr - 167485 167437   49  0  1  118   54    28 0.304   1.08
 3.04 Intr - 171950 171878   73  0  1   87  111    13 0.040   1.96
 3.03 Intr - 180064 180022   43  1  1   90   81    42 0.260   1.51
 3.02 Intr - 181460 181291  170  0  2   65   65    82 0.064   3.27
 3.01 Init - 193694 193664   31  2  1   68   71    48 0.149   1.00
 3.00 Prom - 198634 198595   40                              -5.36

 4.00 Prom + 211218 211257   40                              -3.26
 4.01 Init + 213181 213361  181  0  1   84   60   181 0.866  12.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100120  120  1  0   93   78   235 0.910  23.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:123912349_124132704|GENSCAN_predicted_peptide_1|111_aa
MHFAKKHKKGQKTQANKMKTIKAFVKLKVLKGTCVDLSKLSSPVNLLTPPEPSPTLSHMQ
STAMPITFLPYVVQLSSGSGRSSSTRTPGEAACDPNLSQSVHSTAVATVIG

>gi568815589f:123912349_124132704|GENSCAN_predicted_CDS_1|336_bp
atgcactttgccaagaaacacaagaagggtcaaaagacacaggccaataaaatgaagacc
atcaaggcctttgtcaagctcaaggtcttgaagggcacctgtgttgatctgagtaaatta
tcttcccctgtgaatttgctgacaccccctgagcccagccccactctttctcatatgcaa
agcactgcgatgcccatcacctttcttccttatgttgtgcagctgtccagtggttctggt
agaagcagttccaccaggactccaggggaagcggcatgtgacccaaacctaagccaatcc
gtgcattccactgctgtggccacagtgattggctga

>gi568815589f:123912349_124132704|GENSCAN_predicted_peptide_2|518_aa
MGEDWKNMSHIVNSCYFGGASSRSPPHTGHSGFRAGLAPSCQERSPSTTSFSTPCPLPTN
CNPGAPIDFRSQLRCHHTLGKAFLSPRPARHPRPPPPGPGPGPPAEPATPAAEDSPSLSG
PEVHGVIDEMDRRAKSEAPAISSAIDRGDTETTMPSISSDRAALCAGCGGKISDRYYLLA
VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV
MRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPAHFNHADVAA
AAAAAAAAKSAGLGAAGANPLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNE
NDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR
VLQVWFQNARAKFRRNLLRQENTGVDKSTDAALQTGTPSGPASELSNASLSPSSTPTTLT
DLTSPTLPTVTSVLTSVPGNLEGHEPHSPSQTTLTNLF

>gi568815589f:123912349_124132704|GENSCAN_predicted_CDS_2|1557_bp
atgggagaagactggaagaatatgtctcatattgtcaacagctgctattttgggggagcc
tcatcccgctccccaccccacaccggccactccggctttcgcgctggccttgctccctcg
tgccaggaacgctctccctccaccacctcttttagcaccccctgcccacttcctaccaac
tgcaatcctggtgccccaattgacttcaggtctcagcttcgatgtcatcacactttggga
aaggccttcctgagccccagaccagcccggcacccccgccccccgccccccggccctggc
ccggggccgcccgcagagccggccacacccgctgcggaggactcaccaagtctgtcgggc
cccgaggtgcacggggtcatcgacgagatggaccgcagggccaagagcgaggctcccgcc
atcagctccgccatcgaccgcggcgacaccgagacgaccatgccgtccatcagcagtgac
cgcgccgcgctgtgcgccggctgcgggggcaagatctcggaccgctactacctgctggcg
gtggacaagcagtggcacatgcgctgcctcaagtgctgcgagtgcaagctcaacctggag
tcggagctcacctgtttcagcaaggacggtagcatctactgcaaggaagactactacagg
cgcttctctgtgcagcgctgcgcccgctgccacctgggcatctcggcctcggagatggtg
atgcgcgctcgggacttggtttatcacctcaactgcttcacgtgcaccacgtgtaacaag
atgctgaccacgggcgaccacttcggcatgaaggacagcctggtctactgccgcttgcac
ttcgaggcgctgctgcagggcgagtaccccgcacacttcaaccatgccgacgtggcagcg
gcggccgctgcagccgcggcggccaagagcgcggggctgggcgcagcaggggccaaccct
ctgggtcttccctactacaatggcgtgggcactgtgcagaaggggcggccgaggaaacgt
aagagcccgggccccggtgcggatctggcggcctacaacgctgcgctaagctgcaacgaa
aacgacgcagagcacctggaccgtgaccagccatacccgagcagccagaagaccaagcgc
atgcgcacgtccttcaagcaccaccagcttcggaccatgaagtcttactttgccattaac
cacaaccccgacgccaaggacttgaagcagctcgcgcaaaagacgggcctcaccaagcgg
gtcctccaggtctggttccagaacgcccgagccaagttcaggcgcaacctcttacggcag
gaaaacacgggcgtggacaagtcgacagacgcggcgctgcagacagggacgccatcgggc
ccggcctcggagctctccaacgcctcgctcagcccctccagcacgcccaccaccctgaca
gacttgactagccccaccctgccaactgtgacgtccgtcttaacttctgtgcctggcaac
ctggagggccatgagcctcacagcccctcacaaacgactcttaccaaccttttctaa

>gi568815589f:123912349_124132704|GENSCAN_predicted_peptide_3|391_aa
MAPEKAMQQRATLAMKGFRWTPNVKGWPSPGVIPMTIQSDDSKKMNGPHTTKTTDGIHMD
SFRSLMLAGKSKLNVTVNFVPDEKTEDERDRMTCSRTHSREVASPRCLCICEHVVYVCAV
MVIQEHHVPALYSCSGGFPHAGIGFYSTRKYARCHRLSVCFASRVSFSLTAAWEGKEEPH
PHLPDEETQELHQEEVGRKQAFGTPSSCTPHPRSPGADPTRLLPPRPGQHESSRACAGGS
AELKVHSGSWEMDQVGFPAWKWHHSIDGEQGKLERFESWRQDPKMQPELCFLITPNPSQP
MERRGGQVPTCKPLPLFELTLIIPKMKDVPVRIPEGLLKNAQVIVINHHHQVGTREWVEY
RGYKRSGGEPVGECGNAAGVVLTSSSGQRLF

>gi568815589f:123912349_124132704|GENSCAN_predicted_CDS_3|1176_bp
atggctccagagaaggccatgcagcagagagccaccctggcaatgaagggattcaggtgg
actccaaatgtgaaaggttggccttctccaggggtcattcccatgaccatacagagtgat
gactccaaaaaaatgaatgggccccacaccaccaagaccacagatggaattcacatggac
tccttccgatctctcatgctggctgggaagtccaaactcaatgtgacagtcaatttcgtt
cctgatgagaaaacggaagatgagagagatcgaatgacttgttcaaggacacacagtcgg
gaagtagcatctcccaggtgtctgtgtatctgtgagcatgtggtgtatgtgtgcgctgtc
atggtgatccaggagcaccatgtgcctgccctatacagctgctctgggggcttcccccat
gctggaattggtttctactccaccaggaagtatgctcggtgtcatcggctgagtgtgtgt
tttgcatctcgtgtctcctttagtctaacagcagcgtgggaaggcaaagaggagcctcat
ccccatcttccagatgaggaaactcaagagctgcaccaggaagaggtaggaagaaagcag
gcctttggtacaccatctagctgcactcctcacccacggtctccgggtgcagacccaaca
aggctgctcccacctcgcccggggcagcacgagagttccagggcctgtgccgggggctct
gctgagcttaaagtccactccgggtcctgggagatggaccaggtgggttttcctgcctgg
aagtggcatcactcaattgatggagagcagggcaagctggagcgctttgagagctggcgc
caggatcctaaaatgcagccagagctttgtttcctcatcacacccaacccgagccagccc
atggaacggcgcggggggcaggtgcccacatgtaagccccttcccctctttgagcttacc
ctgatcatccctaagatgaaggatgtgcctgtccgaatccctgagggacttttaaaaaat
gcacaggtcattgtcatcaatcatcatcatcaagttggaaccagggagtgggtggagtat
agaggttacaagagaagtggtggcgagccagtaggggaatgtggaaacgccgctggagtg
gttctgacgagcagctccggccagaggctcttctag

>gi568815589f:123912349_124132704|GENSCAN_predicted_peptide_4|61_aa
MCPPVSLGWGCPGQRPGPAFALKLALQEQLGFHLSPKDDTGAGGLLLLEAEPTQRKAFVL
X

>gi568815589f:123912349_124132704|GENSCAN_predicted_CDS_4|183_bp
atgtgcccgccggtcagcctgggctggggctgccctggtcagaggcctgggcctgccttt
gccctcaagctggctcttcaggagcagcttgggttccacttgagccccaaggatgatact
ggagccgggggcctgctgctgctggaagcagagccaacgcaaagaaaagcctttgttctt
gnn