GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:39:09

Sequence gi568815596r:210193723_210415042 : 221320 bp : 37.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 PlyA -    174    169    6                               1.05
 1.14 Term -   1616   1467  150  2  0   47   40    82 0.144  -3.77
 1.13 Intr -   9722   9609  114  2  0   88  115    93 0.999  11.72
 1.12 Intr -  10960  10859  102  1  0   59   71   111 0.984   5.95
 1.11 Intr -  12074  11910  165  2  0   74  109   118 0.999  11.74
 1.10 Intr -  16540  16474   67  0  1   90   93    55 0.995   4.19
 1.09 Intr -  21431  21363   69  1  0   16   84   131 0.879   2.88
 1.08 Intr -  22789  22625  165  0  0   72  115   131 0.999  12.35
 1.07 Intr -  24380  24243  138  1  0   68   92   113 0.997   8.36
 1.06 Intr -  27080  26925  156  1  0   31   89   185 0.999  11.10
 1.05 Intr -  31327  31113  215  1  2   23   20   181 0.223   1.39
 1.04 Intr -  31885  31465  421  0  1   51  101   295 0.292  20.12
 1.03 Intr -  39843  39802   42  2  0  119   90    50 0.306   4.74
 1.02 Intr -  56995  56929   67  2  1   89  115    37 0.064   3.54
 1.01 Init -  78442  78433   10  1  1   91   93     4 0.095   1.95
 1.00 Prom -  81004  80965   40                              -4.05

 2.02 PlyA -  81484  81479    6                               1.05
 2.01 Sngl -  88422  88045  378  0  0   84   31   218 0.980  11.61
 2.00 Prom -  89021  88982   40                              -8.35

 3.07 PlyA -  89374  89369    6                               1.05
 3.06 Term -  90943  90822  122  2  2   50   49    79 0.082  -2.14
 3.05 Intr - 100078 100001   78  2  0   29   70   138 0.791   4.70
 3.04 Intr - 100696 100523  174  2  0   57   82   194 0.919  14.69
 3.03 Intr - 104841 104698  144  1  0   72   86    75 0.950   5.03
 3.02 Intr - 109070 109046   25  2  1   78  119    44 0.527   3.18
 3.01 Init - 121320 121189  132  0  0   61   88   127 0.663  10.48
 3.00 Prom - 124910 124871   40                               0.25

 4.00 Prom + 129728 129767   40                              -5.25
 4.01 Init + 130874 131112  239  1  2   53   95   113 0.250   6.03
 4.02 Term + 143742 143868  127  0  1   60   48   120 0.054   1.97
 4.03 PlyA + 146144 146149    6                               1.05

 5.00 Prom + 146168 146207   40                              -6.55
 5.01 Sngl + 157929 158258  330  2  0   88   37   314 0.998  22.07
 5.02 PlyA + 158342 158347    6                               1.05

 6.00 Prom + 159338 159377   40                              -6.15
 6.01 Sngl + 159431 160654 1224  1  0   49   41   497 0.253  36.65
 6.02 PlyA + 160741 160746    6                               1.05

 7.05 PlyA - 162593 162588    6                               1.05
 7.04 Term - 166709 166521  189  2  0   11   41   169 0.297   0.97
 7.03 Intr - 171620 171559   62  0  2   90  100    48 0.062   3.73
 7.02 Intr - 176793 176578  216  1  0   89   82    74 0.003   4.45
 7.01 Init - 184450 184339  112  1  1   82   53   121 0.062   8.43
 7.00 Prom - 185512 185473   40                              -7.85

 8.00 Prom + 186018 186057   40                              -6.25
 8.01 Init + 187676 187811  136  1  1   53   88   106 0.815   7.45
 8.02 Intr + 188184 188575  392  1  2   75   50   180 0.156   6.42
 8.03 Intr + 195566 195629   64  1  1   69   96    36 0.214  -0.13
 8.04 Intr + 196517 196651  135  0  0   95   98    75 0.237   8.82
 8.05 Term + 202776 202855   80  1  2   79   43    45 0.215  -3.95
 8.06 PlyA + 203020 203025    6                               1.05

 9.05 PlyA - 203147 203142    6                               1.05
 9.04 Term - 203981 203905   77  0  2   56   35   107 0.133  -0.78
 9.03 Intr - 206363 206230  134  1  2   86   45    64 0.070   1.27
 9.02 Intr - 207863 207675  189  1  0   35   78   103 0.088   1.78
 9.01 Init - 212359 212244  116  1  2   58   50   131 0.133   6.03
 9.00 Prom - 219545 219506   40                              -1.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 176905 176495  411  1  0   66   49   220 0.914  11.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_1|626_aa
MQNSGIKEVVNYGAGFSLQAHRLLRRHFFIRFSIYLVNPGYLRVFGGSIAFIRYSKRFRT
LKRLRAASINKKECCKQRQQFRCKILLLTAKTGVFPRDQPVAWLGLRKGARERFFGRTPQ
VDASADRPPSRGPCPESPSSRRVASVAPPPLCFGHGRTPSPRVPTRPGRPPCAAPAARRA
SWPPFLDPADWVQPASGRRKKGCQPCRPENRPPSPRRGKPKDFSRSSFRSPNPTRLVQRP
AVGPGSLRFGRRCSHSGGEERLETPSAKKLTDIGIRRIFSPEHDIFRKSVRKFFQEEVIP
HHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGPGF
SIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGRQQQLVGQQKANSAKK
ELKDAKEVDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGIS
LFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQE
RLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFVDNC
LQLHEAKRLDSATACMAKYWYACYSN

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_1|1881_bp
atgcagaactctggtataaaagaagttgtcaattatggtgctggtttttctctacaagct
cacagacttctgagaagacacttttttattcgatttagcatctacctggttaatccaggg
tatttgcgcgtatttgggggctccatagctttcatccgttactcaaagcgcttcaggacg
ctaaaaaggctcagagctgcttcgataaacaagaaagaatgctgcaagcaaaggcagcag
tttcgctgtaaaatcctattgctgacagccaagacgggcgtattccctcgcgaccagcct
gtggcgtggttggggctccggaagggcgcgcgcgagcgcttttttgggaggacaccacag
gtggacgcctcagctgatcgtcctccctcccggggaccctgccccgagtcgccgagtagc
cgcagagtcgcctccgtcgccccgccgcccctgtgtttcggacatggccgcacgccttct
ccgagggtccctacgcgtcctgggcggccaccgtgcgccgcgccagctgcccgccgcgcg
agctggcctcctttcctggatcccgcggactgggtgcaaccagcatctgggcggaggaaa
aaggggtgtcagccgtgccgccccgagaacagaccgccgagcccacgtcggggaaagccg
aaagatttctccagaagttcattccggagccccaatccaacccgtctagttcagcggcct
gcagtgggacccgggagcctgcgttttgggaggagatgttctcattccggaggggaagaa
cgtctagaaactccttctgctaaaaaattaacagatataggaattcgaagaatcttttct
ccagagcatgacattttccggaaaagtgtaaggaagtttttccaagaagaagtgattcct
catcactcagaatgggagaaagctggagaagtaagtagggaggtttgggaaaaagctgga
aaacaaggactgcttggtgtcaatattgcagagcatcttggtggaattggaggggatctg
tactccgcagctattgtctgggaggagcaagcttattcaaattgttcaggcccaggtttt
agtattcattcaggtattgtcatgtcctatattacaaaccatggctcagaagaacagatt
aagcactttattccccagatgactgcaggcaaatgtattggtgcaatagcaatgacagag
cctggagctggaagacagcagcaacttgtgggtcaacagaaagcaaatagtgcaaagaaa
gaacttaaagatgccaaagaagttgacttacagggaataaaaacaaatgctaaaaaggat
ggaagtgactggattctcaatggaagcaaggtgttcatcagtaatgggtcattaagtgat
gttgtgattgtagttgcggtcacaaatcatgaagctccctcccctgcccatggtattagc
ctttttctggtggaaaatggaatgaaaggatttatcaagggacgaaagctacataaaatg
ggattaaaagcccaggataccgcagaactattctttgaagatatacggttgccagctagt
gccctacttggagaagagaataaaggcttctattacatcatgaaagagcttccacaggaa
aggctgttaattgctgatgtggcaatttcagctagtgaattcatgtttgaagaaaccagg
aactatgttaaacaaagaaaagcttttggcaaaacagttgctcacctacagacagtgcaa
cataaattagcagaattaaaaacacatatatgtgtaacccgagcatttgtggacaactgt
ctccagctgcatgaagcgaaacgtttggactccgccactgcttgcatggcgaaatattgg
tatgcatgctacagtaattag

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_2|125_aa
MESIIKSLPSKKSPGPNHFHAEFYQKFKDELSPILRKFYQKTEEERILPNSFYDVGIALI
PKPDKDTRKENYRSISLMNMDPKILKMLANQIHQHIKKIIHHDQVEQIHLKIYTISIDAE
KKHLI

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_2|378_bp
atggaatctataataaaaagtcttccatcaaagaaaagcccaggacctaatcacttccat
gctgaattctatcaaaaatttaaagacgaactaagtccaattcttcgcaaattctaccaa
aaaactgaagaggagagaattcttccaaactcattctatgatgtcggcattgccctgata
ccaaaaccagacaaggacacaagaaaagaaaactatagatcaatatccctgatgaacatg
gatccaaaaattctcaaaatgctagcaaaccaaattcaccaacacattaaaaagattatt
caccatgatcaagtggaacagatccacttgaaaatatataccatttcaatagatgcagaa
aaaaagcatttgatctaa

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_3|224_aa
MAPKKDVKKPVAAAAAAPAPAPAPAPAPAPAKPKEEKIDLSAIKSFSADQIAEFKEAFLL
FDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAIS
NNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDSNGC
INYEATLKTSIWNLVSLQLPVGCVRPDTKMGLLSYVSPLWRKLE

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_3|675_bp
atggcaccaaagaaagacgtgaagaaacctgtggctgcggctgcggctgccccagccccg
gcaccggcacctgcacctgcccctgccccagccaaacccaaagaagaaaaaattgacctc
tctgccattaagtccttcagtgctgaccagattgctgaattcaaggaggcatttctcctg
tttgacagaacaggtgattccaagatcaccttaagccaggtcggtgatgtccttcgagct
ctgggcacaaatcccaccaatgcagaggtcaggaaagttctgggaaaccccagcaatgaa
gagctgaatgccaagaaaattgagtttgaacaatttctgcctatgatgcaagccatttcc
aacaacaaggaccaggccacctatgaagactttgttgagggtctgcgtgtctttgacaag
gaaggcaatggcacagtcatgggtgctgaactccgccatgttctagccaccctgggtgaa
aagatgaaagaggaagaagtggaagccctgatggcaggtcaagaagactccaatggctgc
atcaactacgaagccactctgaaaaccagtatctggaacctggtgtcactacaactgcct
gtaggctgtgtcagacctgacaccaagatgggtctcctcagttatgtctccccactgtgg
agaaaattagaatag

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_4|121_aa
MADSAFASTCPGQGFLIRAQESIHVSRRPPYGTLGILERLAASVLVFGAVLLEEETAQRA
LLCCCKPVPGFLKCETPVTLGEAAGEAGEAGEVASFIPSPLGPNRRSPATFTAVHGERSK
G

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_4|366_bp
atggctgacagtgcatttgcttctacttgtcctggtcaaggttttctaattcgggcccaa
gagagtattcatgtctccaggaggccaccctatggcacgttaggcattcttgagagactg
gcggcctcagtccttgtgtttggagcagttctgctagaggaggaaacagcacaaagggca
ctcttatgctgctgtaaaccagtgccaggatttttaaaatgtgagacacctgttacccta
ggtgaagctgctggagaagctggagaagctggagaagtggcctctttcatcccatcacct
ctaggacccaataggaggagccctgccacattcacagcagtacatggggagaggagcaag
ggttga

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_5|109_aa
MGKKQSRKTGNSKNQSATPPPKEHSSSPATEQSWTENDFDKLREEGFRRSNYSELKEEVR
THGKEVKNLEKKLDEWLTRITNAEKSLKYLMELKTKAQELHDKCTSFSS

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_5|330_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaatcagagtgccactcctcct
ccaaaggaacacagctcctcaccagcaacagaacaaagctggacagagaatgactttgac
aagttgagagaagaaggcttcagacgatcaaactactctgagctaaaggaggaagttcga
acccatggcaaagaagttaaaaaccttgaaaaaaaattagacgaatggctaactagaata
accaatgcagagaagtccttaaagtacctgatggagctgaaaaccaaggcacaagaacta
catgacaaatgcacaagcttcagtagctga

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_6|407_aa
MGGFNTPLSTLDISMRQKVNKDIQEVNSALDQVDLIDIYRTLHPKSTEHTFFSAPHHTYS
KIHHIVGSKVLLSKRKRTEIITNCFSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNTHKRKQERSKIDTLTSQLK
ELEKQEQTRSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFEKVNKIDRLIARLIK
KKTEKNQIDAIKNDKGDITTNPTEIQTTIREYYKHLYGNKLENLEEMDKFLNTYTLPRLN
QEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEVLVPFLLKLFQSIEKE
GLLPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILSKILAN

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_6|1224_bp
atgggaggttttaacaccccactgtcaacattagacatatcaatgagacagaaagttaac
aaggatatccaggaagtaaactcagctctcgaccaagtggacctaatagacatctacaga
actctccaccccaaatcaacagaacatacattcttctcagcaccacaccacacctattcc
aaaattcaccacatagttggaagtaaagtactgctcagcaaacgtaaaagaacagaaatt
ataacaaactgtttctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcacta
aatacccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacgttcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgagtcc
aggagctggttttttgaaaaggtcaacaaaattgatagactgatagcaagactaataaag
aagaaaacagagaagaatcaaatagatgcaataaaaaatgacaaaggggatatcaccacc
aatcccacagaaatacaaactaccatcagagaatactataaacacctctatggaaataaa
ctagaaaatctagaagaaatggataaattcctcaacacatacaccctcccaagactaaac
caggaagaagttgaatctctgaataggccaataacaggctctgaaattgaggcaataatt
aatagcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggtgctggtacctttccttctgaaactattccaatcaatagaaaaagag
ggactcctccctaactcattttatgaagccagcatcatcctgataccaaagcctggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacatcgatgcaaaaatc
ctcagtaaaatactggcaaactga

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_7|192_aa
MGPAVAGMVLLEAPGRCDQSGTGVSEAHVAEGYLSLRAGTYLHMPSMGMETGLPSPFQPP
LTTHIALGIQSGIIMCAMPATAIMHAMPANQWTENTPTCPDHCSYYCHPTPRNKRNKHSF
LTQEGGFQVKKATSIGKGGKYYIKGTPRETKECEQQPSVLDLPSDRGYTNEKEPENQLWY
KVGLYQKQNKAL

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_7|579_bp
atggggcctgctgtggctggcatggtgctactagaagccccaggtagatgtgatcagagt
ggcactggtgtatcagaagcccatgttgctgagggttacctgtcactgagagctggcacc
tacctgcacatgccatctatgggcatggagactggtctgcccagtccatttcagccacca
ttaacaacgcacatagcacttgggatccagagtggtatcatcatgtgcgccatgccagct
actgccatcatgcatgccatgccagctaaccagtggacggagaacacacccacctgccca
gaccactgcagttactattgtcatccaacaccgaggaacaagaggaacaagcattcgttt
ctaacacaggaagggggctttcaggtcaagaaagccacatccataggaaaagggggaaag
tactacatcaaggggacaccccgtgagacaaaagaatgtgaacaacagccttcagtccta
gaccttccctctgacagaggctacacaaatgagaaggaaccagaaaaccaactctggtac
aaagttggtttgtaccaaaaacaaaacaaggctctttaa

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_8|268_aa
MWKSLEVPRDLLNGFAQNADSNMDNKVQTEVVSGRNEEFAGNWSKGLGGKNGFMPGPGSP
CCVQSREFLVPCVPVASTVTKRDQGTTQAVTSEGASPKAWHLSRGVEPAGSQKSRIEVWE
RLPRFQRMYGNTWLSRQKFAAGAGLSWRTSARAVQKGNVGSKPPHRVPTGALPSGARTRS
AKAHLPKESLESSLSSSVLAPFPFDFLPIFFGVMARHYQSLLLQALQEPMDSKGLSPNVK
HDNYYSGSPLSYSSNLRRLVIPLGPNST

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_8|807_bp
atgtggaaaagtttggaagttcctagagacttgttgaatggctttgctcaaaatgcagac
agcaatatggacaataaggtccagactgaggtagtctcaggtagaaatgaggaatttgct
gggaactggagcaaaggcctaggagggaaaaatggtttcatgccaggcccagggtccccg
tgctgtgtgcagtctagagaatttttggtgccctgtgtcccagttgcttcaacagtgact
aaaagggaccaaggtacaactcaggccgtaacttcagagggtgcaagccccaaggcttgg
catctttcacggggtgttgagcctgcaggttcacagaagtcaagaattgaggtttgggaa
cgtctgcctagatttcagaggatgtatggaaacacctggctgtccaggcagaagtttgct
gcaggggcagggctctcatggagaacctctgctagggcagtacagaagggaaatgtaggg
tcaaagcccccacacagagtccctactggggcacttcctagtggagctcgtacaagatct
gcaaaagcccatctgcccaaagaatccttggagagttctctgagctcctcagttttagct
cctttcccattcgatttcttacctatcttctttggagtcatggcaagacactaccagtcc
ctgctgctacaggctttgcaggagcctatggattcaaagggcctgagcccaaatgtaaaa
catgacaattactattctggctcccctctttcctattcttccaacttgagaaggcttgtt
attcctctggggcccaatagtacttga

>gi568815596r:210193723_210415042|GENSCAN_predicted_peptide_9|171_aa
MELKNTARELCKAYTSINSQINQEEERISEIEDELNDIKDMDEAGNYHSQQTNTRTENQT
AHVLTHNWELNNENIWTQRGEHHRGHREGNNENIWTPGPVKRQNDPALVCSLHKDVLGTM
GTGPSTVMLTEGSLERTLAKISVYIYMEVLHLSGVMDHFKIPLKDMDPLSE

>gi568815596r:210193723_210415042|GENSCAN_predicted_CDS_9|516_bp
atggagctgaaaaacacagcacgagaactttgtaaagcatacacaagtatcaatagccaa
atcaatcaagaggaagaaaggatatcagagattgaagatgaacttaatgatataaaggac
atggatgaagctggaaactatcattctcagcaaactaacacaagaacagaaaaccaaaca
gcacatgttctcactcataattgggagctgaacaatgagaacatatggacacagagaggg
gagcatcaccggggacacagagaggggaacaatgagaacatatggacaccggggcctgtc
aagagacaaaatgatcctgctctggtttgttccctgcacaaagatgttctgggaacaatg
ggtacaggaccatccactgtgatgctgacagaaggcagcttggagagaacactcgcgaaa
atatctgtttatatatacatggaggttcttcacctttctggtgtcatggaccacttcaag
atccccttaaaagatatggatccactctcagaataa