GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:30:20

Sequence gi568815597r:201384716_201596303 : 211588 bp : 49.43% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    843    838    6                              -3.64
 1.06 Term -   1090    911  180  1  0  116   49   184 0.751  14.91
 1.05 Intr -   2463   1620  844  2  1   83   52   551 0.537  42.38
 1.04 Intr -   4588   4445  144  0  0  126   92   207 0.996  24.30
 1.03 Intr -  12641  12513  129  1  0   61   68    84 0.796   3.51
 1.02 Intr -  13429  13310  120  0  0   54  121    22 0.279   1.71
 1.01 Init -  14591  14554   38  2  2   86   99    46 0.446   5.30
 1.00 Prom -  17915  17876   40                              -4.16

 2.13 PlyA -  19802  19797    6                               1.05
 2.12 Term -  25720  25613  108  1  0   81   44   150 0.996   8.41
 2.11 Intr -  26818  26642  177  1  0   80  100   269 0.999  27.42
 2.10 Intr -  28406  28317   90  2  0   91  105   179 0.999  20.09
 2.09 Intr -  29934  29803  132  0  0   41   71   264 0.994  20.84
 2.08 Intr -  30539  30498   42  2  0  128  100    22 0.980   5.84
 2.07 Intr -  37011  36958   54  0  0   82  121    46 0.941   6.48
 2.06 Intr -  46385  46236  150  2  0   78   86    76 0.697   6.76
 2.05 Intr -  57567  57542   26  1  2   73   77     5 0.006  -4.36
 2.04 Intr -  63532  63381  152  0  2   61   71    86 0.465   4.01
 2.03 Intr -  64166  63982  185  2  2   72   25    98 0.430   0.49
 2.02 Intr -  70709  70638   72  2  0   86   85    40 0.671   3.10
 2.01 Init -  74727  74674   54  0  0   89  100    42 0.884   6.78
 2.00 Prom -  79695  79656   40                              -7.86

 3.11 PlyA -  79812  79807    6                               1.05
 3.10 Term -  84102  83688  415  2  1   16   40   869 0.683  69.63
 3.09 Intr -  85281  85109  173  0  2   78   47   109 0.090   4.54
 3.08 Intr -  95655  95607   49  2  1   78   81    53 0.155   2.28
 3.07 Intr - 100074 100002   73  1  1  117   33    64 0.324   2.26
 3.06 Intr - 100661 100568   94  2  1   75   98   107 0.998   9.94
 3.05 Intr - 104269 104140  130  0  1  106  116   154 0.993  20.70
 3.04 Intr - 105629 105461  169  0  1  103   64   364 0.667  34.50
 3.03 Intr - 111589 111477  113  0  2  117   73    82 0.615   9.62
 3.02 Intr - 122186 121909  278  2  2  -12   64   233 0.424   7.21
 3.01 Init - 122516 122355  162  2  0   87  109   124 0.636  14.07
 3.00 Prom - 124855 124816   40                              -4.46

 4.00 Prom + 126446 126485   40                              -5.46
 4.01 Init + 135401 135544  144  1  0   89   42   229 0.157  18.52
 4.02 Term + 148029 148196  168  2  0  117   47    60 0.227   2.68
 4.03 PlyA + 148861 148866    6                               1.05

 5.08 PlyA - 152277 152272    6                               1.05
 5.07 Term - 153708 153653   56  1  2  112   55    26 0.132  -0.58
 5.06 Intr - 154711 154553  159  2  0   89   49   138 0.150   9.96
 5.05 Intr - 174868 174636  233  0  2   68   49   108 0.379   2.32
 5.04 Intr - 175294 175001  294  0  0   80  -25   206 0.593   4.62
 5.03 Intr - 178240 178156   85  2  1   76   57    74 0.808   1.98
 5.02 Intr - 182684 182528  157  2  1   14   35   140 0.353   0.88
 5.01 Init - 193563 193171  393  0  0   14   44   205 0.687   5.44
 5.00 Prom - 193779 193740   40                              -3.06

 6.04 PlyA - 194656 194651    6                               1.05
 6.03 Term - 196249 196152   98  2  2  102   48    28 0.275  -1.67
 6.02 Intr - 196445 196420   26  1  2  101   98    33 0.146   3.27
 6.01 Init - 211141 211092   50  1  2   80  113    18 0.676   3.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 154570 154627   58  0  1   44  117   114 0.824   9.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:201384716_201596303|GENSCAN_predicted_peptide_1|484_aa
MAVSRKDWSALSRLSLSIAAHRLGLGGHLPRPSRPHSALKHCGQPMGSREGKSPHRALWA
DAAAANSHPDEAPGTEDRSRSAPWVNKPQRAGRKGLLARQRTLEDEEEQERERRRRHRNL
SSTTDDEAPRLSQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQ
RRQVVEAAQAPIQERLEAEEGRNSLSPVQATQKPLVSKKELEIPPRRRLSREQRGPWALE
EESLVGREPEERKKGVPEKSPVLEKSSMPKKTAPEKSLVSDKTSISEKVLASEKTSLSEK
IAVSEKRNSSEKKSVLEKTSVSEKSLAPGMALGSGRRLVSEKASIFEKALASEKSPTADA
KPAPKRATASEQPLAQEPPASGGSPATTKEQRGRALPGKNLPSLAKQGASDPPTVASRLP
PVTLQVKIPSKEEEADMSSPTQRTYSSSLKRSSPRTISFRVRALGTLVCEPLEGKWRKPA
SITT

>gi568815597r:201384716_201596303|GENSCAN_predicted_CDS_1|1455_bp
atggctgtcagcaggaaggactggtccgcgctgtccaggcttagcctctccatagcagct
catcgcctgggactggggggccacctccccagaccctcaagacctcacagtgctctgaag
cactgtgggcagcccatgggctctagagaggggaaaagccctcatagagccctgtgggca
gacgcagctgctgccaacagtcaccctgatgaggcacctggaacagaggaccgctcccgc
tccgctccctgggtgaacaagcctcagcgggcaggcaggaaagggctccttgcccggcag
aggactctggaggatgaggaggaacaggagcgcgagcgcaggcggcggcaccgcaacctg
agctccaccacggacgatgaggctcccaggctcagccagaatggagaccggcaggcctct
gcttctgagagactaccgagcgtggaagaagcagaggtgcccaagccactgcccccagcc
tccaaagatgaggacgaggacatccagagcatcctcagaacacggcaggagcggaggcag
aggcggcaggtggtggaggctgcacaggcccccatccaggagaggctggaggcagaggag
gggaggaacagcttgagccctgtgcaggccacacagaaacccctagtctccaagaaggaa
ctggaaatcccacctcgccggagactgagtcgggaacagcggggcccctgggccctggag
gaggagagcttggtgggcagggagccagaagagaggaagaaaggggttccagaaaagtcc
ccagtcttggagaagtcctccatgccaaagaagacggcacctgaaaagagcctggtctcc
gataaaacctccatctctgagaaggtgctggcctcagagaagacatctctatcagagaag
atagcagtgtcagagaaaagaaacagctcagagaagaagtctgttctagaaaaaaccagt
gtctctgagaagtcgctggccccagggatggcactgggctcaggaaggaggctggtgtct
gagaaagcttccatctttgagaaggcactggcctcagagaagagcccaactgcagatgct
aagccggccccaaagagggccacagcctcagagcagcccctggcgcaggagccgccagcc
tctgggggaagcccagccaccaccaaggagcagagaggaagggccctccctgggaagaac
ctgccctctttggcaaagcagggggcttcagaccctccgactgtggcctcccgcctccca
cccgtcacactccaggtgaaaatccccagcaaggaggaagaggcagatatgtcctcaccc
acacagcgaacctacagcagctccctcaaacgctccagccccaggaccatctcctttcgg
gtgagagccctgggcaccctggtctgcgagccactggagggcaagtggaggaagcccgca
tccattacaacatag

>gi568815597r:201384716_201596303|GENSCAN_predicted_peptide_2|413_aa
MAFQVEEITCAKVPGPEKVDVSWAPGSSWDTSDEWSREEIRQGINAKDDYPYFTDEKTGS
KRRKALPEATQGVRGSASIHSSSGSGDGVCVVNLFERPEGRLKACLPELLKEQSDSIPQD
DSSDPSSPLPKLFPGSLGGGGEKDYERRDGTTQAEVGPHYDAQAGHRVEGVVIVQGDLPG
PKFNNNKGPVPSCCFYVCPSTLLEGEQFITYVKSAVYGEAQASPAPRGLNKRKPKITASR
KLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKVE
VVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSADAMLRALLGSKHKV
SMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTSQ

>gi568815597r:201384716_201596303|GENSCAN_predicted_CDS_2|1242_bp
atggcgttccaggtggaagaaatcacatgtgcaaaggtgccaggaccagagaaggtggat
gtgagctgggctcctgggagctcctgggacacttcagatgagtggagccgggaagaaatc
cggcagggtataaatgcaaaagatgattacccctattttacagatgagaaaacaggttca
aagagaaggaaggctttacctgaggccacccagggagtaagaggaagtgccagcattcac
agcagctctgggagtggggatggagtatgtgtggtgaatttattcgagaggcccgaaggc
cgtctgaaagcatgtctgcctgagctgcttaaggagcagtcagattccatcccacaggat
gactcgtctgaccccagctccccactccctaaactgttcccagggtccctgggtgggggc
ggagagaaagattatgagaggcgagatggcacaacacaggcagaggtgggacctcactat
gatgcccaggctgggcacagggtggagggggtggtcatagttcagggtgacctcccaggg
cctaagtttaacaacaacaaaggcccagtgcccagctgttgtttctatgtgtgtccgagc
acattgttggagggcgagcagttcatcacctatgtcaagtctgcagtctacggcgaggca
caggccagcccagctccacgaggactgaacaagagaaaacccaagatcactgcctcccgc
aaactcttgctgaagagcctgatgctggccaaggccaaggaatgctgggagcaggagcac
gaggagcgcgaggctgagaaggtgcgctacctggcagagcgcatccccacgctgcagacc
cgtggcctgtccctcagtgccctgcaggacctgtgccgggagctgcacgccaaggtggag
gtggtggatgaggagcgatacgacattgaggccaaatgcctccacaacaccagggagatt
aaggacctgaagctgaaggtgatggacctccgtgggaagttcaagcgcccgcccctgcgt
cgagtccgtgtctcggctgacgccatgctccgggccctgctgggctccaagcacaaggtg
tccatggatctgcgggccaacctcaagtctgtgaagaaggaagacacagagaaggagcgg
cctgtggaggtgggtgactggaggaagaacgtggaggccatgtctggcatggaaggccgg
aagaagatgtttgatgccgccaagtctccgacctcacaatag

>gi568815597r:201384716_201596303|GENSCAN_predicted_peptide_3|551_aa
MTSALEWCSVQSPLVGVARDTPSAERNKTARRPGAPSRHFRERLPPLRRRASCQALGPSP
SRAFLGFLDTVDFRVCVTQGDPAPRNRLQVGQNNRRFCAPLTLIVWQRDEGIRATPSLTL
LLGRKCPRAGWGKHLGLTLDICVPERRMPNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKS
CFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHE
EAPGHRPTTNPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGL
ESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGAGALVHSEDPLAFQRFLMEAPGSPLCMR
EKSILGEGRGRTESAERKEQGWSCAYTWDWLCHRSSVGACKCAVERTADSGIPSLELSAN
LGAPMTAAATATVLKEGVLEKRSGGLLQLWKRKRCVLTERGLQLFEAKGTGGRPKELSFA
RIKAVECVESTGRHIYFTLVTEGGGEIDFRCPLEDPGWNAQITLGLVKFKNQQAIQTVRA
RQSLGTGTLVS

>gi568815597r:201384716_201596303|GENSCAN_predicted_CDS_3|1656_bp
atgacatcagccctggagtggtgcagtgtgcaaagcccactggttggcgtggcccgggac
acgccttccgcggagcggaacaaaacggcgcgcaggccgggcgcacccagccgccacttc
cgagagcgcctgccgcccctgcgccgccgagccagctgccaggcactaggtccgtcccca
tcccgggccttcctgggcttcctggacacagttgacttccgcgtgtgcgtgacccagggc
gacccggctccccgcaaccgcctgcaagtcgggcagaacaatcggcgattctgcgcgcca
ctgacgctcattgtatggcagagagatgagggcatccgtgccaccccctccctcaccctc
ctgctggggagaaaatgcccgcgggcggggtggggcaaacatctgggcctgaccttggac
atctgtgtccctgagcgcagaatgccgaactggggaggaggcaagaaatgtggggtgtgt
cagaagacggtttactttgccgaagaggttcagtgcgaaggcaacagcttccataaatcc
tgcttcctgtgcatggtctgcaagaagaatctggacagtaccactgtggccgtgcatggt
gaggagatttactgcaagtcctgctacggcaagaagtatgggcccaaaggctatggctac
gggcagggcgcaggcaccctcagcactgacaagggggagtcgctgggtatcaagcacgag
gaagcccctggccacaggcccaccaccaaccccaatgcatccaaatttgcccagaagatt
ggtggctccgagcgctgcccccgatgcagccaggcagtctatgctgcggagaaggtgatt
ggtgctgggaagtcctggcataaggcctgctttcgatgtgccaagtgtggcaaaggcctt
gagtcaaccaccctggcagacaaggatggcgagatttactgcaaaggatgttatgctaaa
aacttcgggcccaagggctttggttttgggcaaggagctggggccttggtccactctgaa
gatcccctggcctttcagcgcttcctgatggaggcaccagggagcccactctgtatgcgg
gagaagtccattcttggggaaggccgagggaggacagaatctgcggagcggaaggagcaa
ggttggagctgcgcttacacctgggactggctgtgccatcggtccagcgtcggcgcctgc
aagtgtgcggtggagaggactgcagacagtggcatccccagcctggagctttccgcgaac
ctcggggcgcccatgacggcggcggcgacggctaccgtgctcaaggagggcgtgctggag
aagcgcagcggcgggctgctgcagctgtggaagcggaagcgctgcgtcctcaccgaacgc
gggctgcagctcttcgaggccaagggcacgggcggccggcccaaggagctcagcttcgcc
cgcatcaaggccgtggagtgcgtggagagcaccgggcgccacatctacttcacgctggtg
accgaagggggcggcgagatcgacttccgctgccccctggaagatcccggctggaacgcc
cagatcaccctaggcctggtcaagttcaagaaccagcaggccatccagacagtgcgggcc
cggcagagcctcgggaccgggaccctcgtgtcctaa

>gi568815597r:201384716_201596303|GENSCAN_predicted_peptide_4|103_aa
MVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKEVCLETFLLGITCLPPPHPFL
TTAGFTSTAFTSSRIWQFILFQLLSSSPTLTKVDIAASKSERS

>gi568815597r:201384716_201596303|GENSCAN_predicted_CDS_4|312_bp
atggtggccaagaaggatgtccacatgcctaagcacccggagctggcagacaagaatgcg
cccaaccttcgtgtcatgaaggccatgcagtctctcaagtcccgaggctacgtgaaggaa
gtttgcctggagacatttctactgggaatcacctgcctacctccacctcatccatttctc
accacagctggattcacctctacagcctttacctccagtcgtatttggcaattcatcctt
ttccagctcctatcatcctcccctaccctcaccaaagtggacatcgcagcctctaaatct
gaacggagctga

>gi568815597r:201384716_201596303|GENSCAN_predicted_peptide_5|458_aa
MGSTVELRRTIRELEDRTIEINQYEQQKENRPKQKAEQILRGLWDYNKRSNFRVIEVLVR
EKKEDGAEKVLQEKIVENFAKLARDINPQIQESEQMPNKIDLKKSQIKHLRVKDKETILK
AGRETGNLNLQWPSSYSAGSNPGNLTGQGPSGPANALVPVDSPIRKNNRGNPLNQQKPVP
HEEGCYHPYFSEKETDAQTDPVIQQHPGSGLSAGLPQPEPLTPTFFQSEKEGTRACGTCF
LSPQDAELRAACIGEEGVGIGLGSAGQLHPLVAATGRCKAMQTKAEPDSSSFPESLYTAF
IKHLLADGTGFSDQCFNGQFCCPLPTCMAPRPSSRTKLLTSIKTLLPVVTLRTLSLPQPT
RDLKAATVGRALFLVVYVRVSSVRSSKGPASQASQNGKRQTLSAATARPPRAGHSPERLP
ARAPGPRRSRAESRIPKGSAGTWEWEEGEEEERGNDRT

>gi568815597r:201384716_201596303|GENSCAN_predicted_CDS_5|1377_bp
atgggatcaacagtagaattaaggagaacaatcagagaactggaagatagaacaatagaa
attaaccaatatgaacaacagaaagaaaatagaccaaaacaaaaagcagagcagattctt
aggggcctgtgggactataacaaaagatctaactttcgtgttattgaagttctggtaaga
gaaaagaaagaggatggtgctgaaaaagtactccaagaaaaaatagttgaaaactttgca
aagttggcaagagacataaacccacagattcaagaatctgagcaaatgccaaacaagata
gacctaaagaaatcacaaattaagcatctgcgagttaaagacaaagaaacaatcttgaaa
gcaggaagagaaacaggaaaccttaatctacagtggcccagctcctacagcgcgggctcc
aaccccggtaacttgacaggacaaggcccctctggcccagccaatgccctcgtacctgtg
gacagccccatcagaaaaaacaacagaggcaaccccctgaaccaacagaagcctgttccc
catgaagagggctgttatcatccctacttttcagaaaaggaaactgatgctcagacagat
cccgtgatccaacagcatccaggatctggactgagtgcaggactgccccagcctgagcct
ctcaccccaactttcttccagtctgagaaggaggggacacgtgcctgtgggacctgcttc
cttagcccacaagatgcagagctgcgagctgcctgcataggagaggagggcgtggggatc
gggctgggttctgctgggcaactgcaccctctggtggcggcaacaggaagatgcaaggcc
atgcagacaaaggccgaaccagattcttcctccttcccagaatccctctacaccgccttt
attaagcacctattggcggatggcacgggcttcagcgatcagtgcttcaatggacaattt
tgctgccctctgcccacatgcatggcacctcgaccatcatctcggacaaagcttctcacc
tccatcaaaaccctgctcccagtcgtaactctaaggaccctcagcctcccccaacctaca
agagacttaaaagcagcaactgttggaagagcactgttcctggtggtttatgtgcgagtc
tccagtgtcagatcctccaagggacctgccagccaagcctcgcaaaacgggaagcgccag
accctcagcgccgcgaccgcgcgaccgccccgcgccggccactcaccggagcgcctgccc
gcccgggctccgggtccgcgccgcagccgcgcagagtcgcgcatccccaagggcagcgcg
gggacttgggagtgggaggagggggaagaagaggagagaggaaatgacaggacctga

>gi568815597r:201384716_201596303|GENSCAN_predicted_peptide_6|57_aa
MAWWKRQKKGTLVAGDTMTAQKAFKAAVLPGGMPFTIVSIQKSIYLSKFSSSITYLL

>gi568815597r:201384716_201596303|GENSCAN_predicted_CDS_6|174_bp
atggcttggtggaagaggcagaagaagggcaccttggttgcaggggacacgatgactgct
cagaaagcctttaaggctgctgtgttgcctggtgggatgccctttaccatcgtgtccatc
cagaaatccatttatctttcaaagtttagctcaagcataacctacctcctctaa