Result of FASTA (ccds) for pF1KB0918
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0918, 331 aa
  1>>>pF1KB0918 331 - 331 aa - 331 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0122+/-0.000716; mu= 13.1591+/- 0.043
 mean_var=82.7759+/-16.277, 0's: 0 Z-trim(110.6): 27  B-trim: 0 in 0/51
 Lambda= 0.140969
 statistics sampled from 11695 (11721) to 11695 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.36), width:  16
 Scan time:  2.250

The best scores are:                                      opt bits E(32554)
CCDS31975.1 PHF11 gene_id:51131|Hs108|chr13        ( 331) 2234 463.6 9.8e-131
CCDS41887.1 PHF11 gene_id:51131|Hs108|chr13        ( 292) 1981 412.1 2.7e-115
CCDS14640.1 PHF6 gene_id:84295|Hs108|chrX          ( 312)  352 80.9 1.5e-15
CCDS14639.1 PHF6 gene_id:84295|Hs108|chrX          ( 365)  311 72.5 5.7e-13


>>CCDS31975.1 PHF11 gene_id:51131|Hs108|chr13             (331 aa)
 initn: 2234 init1: 2234 opt: 2234  Z-score: 2460.6  bits: 463.6 E(32554): 9.8e-131
Smith-Waterman score: 2234; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 QSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 KKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 VHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI
              250       260       270       280       290       300

              310       320       330 
pF1KB0 ELLQDLKQTLCSFQENRDLMSSSTSISSLSY
       :::::::::::::::::::::::::::::::
CCDS31 ELLQDLKQTLCSFQENRDLMSSSTSISSLSY
              310       320       330 

>>CCDS41887.1 PHF11 gene_id:51131|Hs108|chr13             (292 aa)
 initn: 1981 init1: 1981 opt: 1981  Z-score: 2183.4  bits: 412.1 E(32554): 2.7e-115
Smith-Waterman score: 1981; 100.0% identity (100.0% similar) in 292 aa overlap (40-331:1-292)

      10        20        30        40        50        60         
pF1KB0 ERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHE
                                     ::::::::::::::::::::::::::::::
CCDS41                               MEKRTCALCPKDVEYNVLYFAQSENIAAHE
                                             10        20        30

      70        80        90       100       110       120         
pF1KB0 NCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNK
               40        50        60        70        80        90

     130       140       150       160       170       180         
pF1KB0 NYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHV
              100       110       120       130       140       150

     190       200       210       220       230       240         
pF1KB0 QPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLM
              160       170       180       190       200       210

     250       260       270       280       290       300         
pF1KB0 DETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQT
              220       230       240       250       260       270

     310       320       330 
pF1KB0 LCSFQENRDLMSSSTSISSLSY
       ::::::::::::::::::::::
CCDS41 LCSFQENRDLMSSSTSISSLSY
              280       290  

>>CCDS14640.1 PHF6 gene_id:84295|Hs108|chrX               (312 aa)
 initn: 341 init1: 257 opt: 352  Z-score: 392.4  bits: 80.9 E(32554): 1.5e-15
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)

               10        20        30        40          50        
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
                                   . ..: :     ..: :..:   .: : . : 
CCDS14                             MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
                                           10        20        30  

       60        70        80         90       100       110       
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
       .......:::..:.:.::.::  . :.. :.   .:..:.:.:::.:: :: :..::  :
CCDS14 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
             40        50        60           70        80         

       120       130       140       150       160       170       
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
       ::.:::.:.:...::. :: .: :  .    .::: . :..: .                
CCDS14 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNE
      90       100       110       120       130       140         

       180       190       200       210       220       230       
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
                                                                   
CCDS14 HELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDT
     150       160       170       180       190       200         

>>CCDS14639.1 PHF6 gene_id:84295|Hs108|chrX               (365 aa)
 initn: 376 init1: 258 opt: 311  Z-score: 346.3  bits: 72.5 E(32554): 5.7e-13
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)

               10        20        30        40          50        
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
                                   . ..: :     ..: :..:   .: : . : 
CCDS14                             MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
                                           10        20        30  

       60        70        80         90       100       110       
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
       .......:::..:.:.::.::  . :.. :.   .:..:.:.:::.:: :: :..::  :
CCDS14 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
             40        50        60           70        80         

       120       130       140       150       160       170       
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
       ::.:::.:.:...::. :: .: :  .    .::: . :..: .                
CCDS14 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEH
      90       100       110       120       130       140         

       180       190       200       210       220       230       
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
                                                                   
CCDS14 ELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTR
     150       160       170       180       190       200         

>--
 initn: 401 init1: 258 opt: 311  Z-score: 346.3  bits: 72.5 E(32554): 5.7e-13
Smith-Waterman score: 311; 37.5% identity (67.5% similar) in 120 aa overlap (45-160:212-330)

           20        30        40        50            60        70
pF1KB0 ASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNV----LYFAQSENIAAHEN
                                     :..:    : :     :.. .... ::: .
CCDS14 TSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYK
             190       200       210       220       230       240 

               80        90       100       110       120       130
pF1KB0 CLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKN
       :.:.::: :.    .  .   .::...: .::.::...:: .: . :::.::..: : :.
CCDS14 CMLFSSGTVQLTTTSRAEFG-DFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
             250       260        270       280       290       300

              140       150       160       170       180       190
pF1KB0 YHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQ
       ::. :. .: :    .  :::::: :..:.                              
CCDS14 YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
              310       320       330       340       350       360




331 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 17:14:25 2016 done: Sat Nov  5 17:14:25 2016
 Total Scan time:  2.250 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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