GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:14:51

Sequence gi568815585f:49396002_49628662 : 232661 bp : 40.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12044  12104   61  1  1   38   88    87 0.967   5.16
 1.02 Intr +  16868  16950   83  0  2   73   92    76 0.538   4.94
 1.03 Intr +  21802  21949  148  0  1   53   58    72 0.288  -0.41
 1.04 Term +  25771  25883  113  2  2   69   47    76 0.132  -0.66
 1.05 PlyA +  26034  26039    6                               1.05

 2.05 PlyA -  26286  26281    6                               1.05
 2.04 Term -  27222  27101  122  1  2   86   42   115 0.579   4.36
 2.03 Intr -  38222  38085  138  0  0   80   94    84 0.203   7.71
 2.02 Intr -  44911  44866   46  1  1   47   89    58 0.104  -1.14
 2.01 Init -  56668  56609   60  1  0   90   98    23 0.039   4.80
 2.00 Prom -  57904  57865   40                              -5.65

 3.00 Prom +  59510  59549   40                              -9.65
 3.01 Init +  59863  59944   82  0  1   61   92    77 0.907   6.58
 3.02 Intr +  64106  64231  126  0  0   46   86   115 0.925   6.83
 3.03 Term +  68020  68066   47  2  2   94   54    36 0.416  -2.81
 3.04 PlyA +  68763  68768    6                               1.05

 4.00 Prom +  76105  76144   40                              -1.05
 4.01 Init +  80596  81038  443  0  2   53   84   199 0.846  11.60
 4.02 Intr +  84218  84334  117  2  0   85   82    25 0.416   0.26
 4.03 Intr +  84946  85115  170  1  2   74  103    47 0.770   3.47
 4.04 Intr +  86736  86961  226  1  1   99   75   112 0.917   7.12
 4.05 Intr +  87463  87562  100  1  1   84   53    36 0.729  -1.11
 4.06 Intr +  92291  92629  339  1  0  -11   82   291 0.029  13.34
 4.07 Intr +  96351  96439   89  2  2   22   84    31 0.202  -6.05
 4.08 Intr +  99898 100094  197  1  2   30   82   136 0.100   5.34
 4.09 Intr + 110619 110755  137  1  2   51  111    40 0.006   1.97
 4.10 Intr + 117058 117165  108  0  0   70  111   141 0.994  14.16
 4.11 Intr + 119842 119872   31  0  1   81  103    10 0.708  -1.41
 4.12 Intr + 128084 128215  132  0  0   78   84    75 0.544   5.80
 4.13 Term + 128912 129015  104  0  2   51   54    95 0.580  -0.14
 4.14 PlyA + 129708 129713    6                               1.05

 5.00 Prom + 132252 132291   40                              -3.75
 5.01 Init + 135284 135384  101  1  2   97   23   111 0.460   5.28
 5.02 Term + 138037 138226  190  1  1   67   38   135 0.416   2.34
 5.03 PlyA + 138278 138283    6                               1.05

 6.14 PlyA - 138449 138444    6                               1.05
 6.13 Term - 141223 141114  110  2  2   77   43    95 0.795   1.59
 6.12 Intr - 144212 144083  130  2  1   68   75    58 0.769   1.85
 6.11 Intr - 145005 144875  131  1  2   98   78    51 0.953   4.59
 6.10 Intr - 145826 145675  152  1  2   85   52   165 0.984  11.49
 6.09 Intr - 148862 148736  127  0  1   83   68   160 0.995  12.32
 6.08 Intr - 150617 150560   58  2  1   97  101    11 0.804   0.84
 6.07 Intr - 150890 150836   55  1  1   14  105    39 0.257  -3.74
 6.06 Intr - 155467 155325  143  1  2   89   88    94 0.915   7.73
 6.05 Intr - 156284 156177  108  2  0  111   98   102 0.990  13.06
 6.04 Intr - 159672 159514  159  0  0  136   78   148 0.999  17.86
 6.03 Intr - 164083 163917  167  2  2   80  107   124 0.999  12.26
 6.02 Intr - 170767 170617  151  1  1   54  116   126 0.996  10.81
 6.01 Init - 171278 171153  126  2  0   78   94   120 0.877  11.83
 6.00 Prom - 184149 184110   40                              -2.35

 7.04 PlyA - 184630 184625    6                               1.05
 7.03 Term - 189906 189734  173  1  2   92   53   106 0.249   4.51
 7.02 Intr - 191343 191215  129  1  0  114   70    16 0.160   2.15
 7.01 Init - 200291 200120  172  2  1   26   66   127 0.372   3.95
 7.00 Prom - 206165 206126   40                              -6.95

 8.04 PlyA - 206667 206662    6                               1.05
 8.03 Term - 224788 224330  459  1  0  106   53   261 0.961  18.50
 8.02 Intr - 225986 225835  152  0  2   61   44   116 0.512   3.46
 8.01 Init - 229552 229447  106  1  1   87   39    58 0.270   1.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  54681  54490  192  0  0   74   48   154 0.884   4.89
S.002 Intr +  92289  92629  341  1  2   27   82   295 0.884  17.07
S.003 Init + 116630 116635    6  1  0   87   94     0 0.847   1.53


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_1|134_aa
MNVNLAEESKGKETVGDEIKGGGIQMVMLASQPLTSYCAARFLTGHGQKLKSELKKTLQV
IMLNIQKVRIPTRDGYNEKDILSTGKNVEKLELSNIAGGQLRTGREPSPSGGNEATLSTP
SSSVGGCLLKHRFK

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_1|405_bp
atgaatgtgaatttggcagaagaatcaaagggcaaagaaacagtaggtgatgaaattaaa
ggaggcggaattcagatggtaatgcttgccagccagccactcacctcctactgtgctgcc
cggttcctaacaggccatggacagaaattaaaatctgagttaaaaaaaaccctgcaagtc
attatgctaaatattcagaaagtgagaatacccactagggatggctataatgaaaaagac
atactaagcactggcaaaaatgtagagaaactggaactctcaaacattgctggtggtcaa
ctgagaacagggagagaaccaagcccctctggtggtaatgaggcaaccctgtctaccccc
agcagtagtgttggagggtgcctgctaaaacacagatttaagtaa

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_2|121_aa
MTSKWNVVSWMGSWNGKRHQKTLKTPPKALGTDNFRYPSNIEKKEYQEQSVLSCCSERKD
ANPKSVVCSFFMQEQCTKGEKHLFNLKFCGKDPVICFTCRPGDPDDTNDRASMIYGIVLH
E

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_2|366_bp
atgacaagtaaatggaatgtggtgtcctggatgggatcttggaatggaaaaagacatcag
aaaaccctaaagactccaccaaaggctcttggaactgataacttcagatatccatcaaat
attgagaagaaagaatatcaggagcaaagtgttctaagttgctgttcagaacgtaaagat
gcgaaccccaaatcagtggtttgttcattcttcatgcaagagcaatgcactaaaggagag
aagcatttatttaatctgaaattctgcggaaaggacccagtaatctgtttcacctgccgt
ccaggtgatcctgatgatactaatgatagagcatcaatgatctatggtatagtccttcat
gagtag

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_3|84_aa
MAVQMIVITYVVSLKVYLDEIGGEDHNSDAKTFWMELEDDGKVDFIFEQVQNVLQSLKQK
IKDGSATNKGASQKEVNAQSSGEI

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_3|255_bp
atggctgtacaaatgattgtaataacttatgttgtttcattaaaggtgtacttagatgaa
attggtggtgaagatcacaatagcgatgcaaaaactttctggatggagctagaagatgat
ggaaaagtggacttcatttttgaacaagtacaaaatgtgctgcagtcactgaaacaaaag
atcaaagatgggtctgccaccaataaaggagcatcacagaaagaagtgaatgcccaaagc
agtggtgagatttga

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_4|730_aa
MPLNLKGENPLQLPIKCHFQRRHAKTNSHSSALHVSYKTPCGRSLRNVEEVFRYLLETEC
NFLFTDNFSFNTYVQLARNYPKQKEVVSDVDISNGVESVPISFCNEIDSRKLPQFKYRKT
VWPRAYNLTNFSSMFTDSCDCSEGCIDITKCACLQLTARNAKTSPLSSDKITTGYKYKRL
QRQIPTGIYECSLLCKCNRQLCQNRVVQHGPQVRLQVFKTEQKGWGVRCLDDIDRGTFVC
IYSGRLLSRANTEKSYGIDENGRDENTMKNIFSKKRKLEVACSDCEVEVLPLGLETHPRT
AKTEKCPPKFSNNPKELTVETKYDNISRIQYHSVIRDPESKTAIFQHNGKKMDSSSNHVD
EFEDNLLIESDVIDITKYREETPPRSRCNQATTLDNQNIKKAIEVQIQKPQEGRSTACQR
QQVFCDEELLSETKNTSSDSLTKFNKGNVFLLDATKEGNVGRFLNYFNTCWRSNIWIDKT
LSHQPFEWGEGEALLDSKRQPRFKKTKPSAAGALPGSRYPAATRSCSTVMAQASPPRPER
VLGASSPEARPAQEALLLPTGILLIGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIA
AHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKDKTQLLTLAYATVKVPF
LKKCKEAGLLNYLLEEILDKVHSIPEKLMDETTSESEVSNRLATKRMCHSEIDSVTYAPL
PPPCIPVAKI

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_4|2193_bp
atgccactgaacttgaagggagaaaaccctctgcagctgccaatcaaatgtcacttccaa
agacgacatgcaaagacaaactctcattcttcagcactccacgtgagttataaaacccct
tgtggaaggagtctacgaaacgtggaggaagtttttcgttacctgcttgagacagagtgt
aactttttatttacagataacttttctttcaatacctatgttcagttggctcggaattac
ccaaagcaaaaagaagttgtttctgatgtggatattagcaatggagtggaatcagtgccc
atttctttctgtaatgaaattgacagtagaaagctcccacagtttaagtacagaaagact
gtgtggcctcgagcatataatctaaccaacttttccagcatgtttactgattcctgtgac
tgctctgagggctgcatagacataacaaaatgtgcatgtcttcaactgacagcaaggaat
gccaaaacttcccccttgtcaagtgacaaaataaccactggatataaatataaaagacta
cagagacagattcctactggcatttatgaatgcagccttttgtgcaaatgtaatcgacaa
ttgtgtcaaaaccgagttgtccaacatggtcctcaagtgaggttacaggtgttcaaaact
gagcagaagggatggggtgtacgctgtctagatgacattgacagagggacatttgtttgc
atttattcaggaagattactaagcagagctaacactgaaaaatcttatggtattgatgaa
aacgggagagatgagaatactatgaaaaatatattttcaaaaaagaggaaattagaagtt
gcatgttcagattgtgaagttgaagttctcccattaggattggaaacacatcctagaact
gctaaaactgagaaatgtccaccaaagttcagtaataatcccaaggagcttactgtggaa
acgaaatatgataatatttcaagaattcaatatcattcagttattagagatcctgaatcc
aagacagccatttttcaacacaatgggaaaaaaatggactcaagttcaaaccatgttgat
gagtttgaagataatctgctgattgaatcagatgtgatagatataactaaatatagagaa
gaaactccaccaaggagcagatgtaaccaggcgaccacattggataatcagaatattaaa
aaggcaattgaggttcaaattcagaaaccccaagagggacgatctacagcatgtcaaaga
cagcaggtattttgtgatgaagagttgctaagtgaaaccaagaatacttcatctgattct
ctaacaaagttcaataaagggaatgtgtttttattggatgccacaaaagaaggaaatgtc
ggccgcttccttaattattttaacacttgttggagaagcaatatctggatcgataaaaca
ctgtcccatcaaccatttgagtggggagagggagaagctcttcttgactcaaagcgacag
cccagatttaagaaaacgaaacctagtgcagctggggcacttccgggatctcgctatccg
gccgccacccgcagctgcagcacagtcatggcccaggcgtcgccgccccggcccgagagg
gtgctcggcgccagcagcccggaggcccggcccgcgcaggaggcgctcctccttcccacc
gggatattacttataggtgtctttcaggttgcagaaaagatggaaaaaaggacatgtgca
ctctgccccaaagatgtcgaatataatgtcctatactttgcacaatcagagaatatagct
gctcatgagaattgtttgctgtattcttcaggacttgtggaatgtgaggatcaggatcca
cttaatcctgatagaagttttgatgtggaatcagtaaagaaagaaatccagagaggaagg
aagttgaaagataaaacccaactccttactctggcatatgcaactgtgaaagttcctttt
cttaagaaatgcaaggaagcaggacttcttaattacttacttgaagaaatattagacaaa
gttcattcaattccagaaaaactcatggatgagactacttcagaatcagaggtgtctaac
aggttggccactaagagaatgtgccattcagagattgattcggtcacatatgctcccctg
ccaccgccctgcattcctgttgctaagatctga

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_5|96_aa
MHLKQQSPTFLAPGTGFVEDNFSTDHGDGAVGQGITSPVEHKLDTSSTVPQSTHTEPSSL
ALQFLKAPHLLALAMNSFSRGPSICQNAAVCVTSVK

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_5|291_bp
atgcacctaaagcagcagtccccaacctttttggcaccagggactggtttcgtggaagac
aatttttccacggaccatggggatggggcggttggtcagggaatcacatcacccgtagag
cacaaactggacacatcctcaacagtgccccagagcactcacacagaacccagcagcctt
gcgcttcagttcttaaaggctccacatttactggctttagcaatgaattcctttagcaga
gggccatccatttgccaaaatgctgcagtctgtgtaacttctgtcaaatga

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_6|538_aa
MVDVGKWPIFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQ
STLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQ
VCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHI
KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC
GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERPYACTGPWPVINWVA
RQEMGPSSCRKTSSGLPLILHYEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKA
VLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDL
ATSYCENRLKKLCQHIIKRGITVENAFSLFSAAVRYDAECLAHIRHLINVELDEDSTLKE
ALRMISELKAGMVGFTDSERIKVTLTTGWTELGVVRDLVSSGMCLVGSCDAEAPAHPG

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_6|1617_bp
atggtggatgtcggaaagtggcccatcttcactctactctcccctcaagagatcgcgtct
attcggaaggcgtgtgtcttcggcacctcagccagtgaagcactgtacgttactgacaat
gatgaggtctttgtatttggactgaactatagtaactgtctaggaactggagataaccag
agtacacttgtacccaaaaagctagaaggcttatgtggaaagaagattaaaagcctcagt
tacgggagtggaccacatgttcttctcagcaccgaagatggagtggtttatgcctggggc
cacaatggatatagccagcttgggaatgggacgaccaaccaaggcattgctcccgtccag
gtctgtaccaatctcttgatcaagcaagtggtggaagtagcttgtggctcacatcattca
atggctctggcagctgatggagaggtgtttgcttggggttataacaactgtggccaagtg
ggatcaggttctacagcaaatcaaccaactcctcgaaaagttacaaactgtttacatatt
aagagggtagttggcattgcctgtggtcagacttcatccatggctgttctggacaatggc
gaggtatatggctggggttacaatggcaacggtcagctgggcctgggaaacaatggcaac
cagctgacccctgtgagagtggcagctttgcacagcgtgtgtgtgaaccagattgtctgc
ggttacgcacatactctagcactaacagatgagggcttgctgtatgcctggggagctaac
acatatgggcagctgggaactggcaataaaaataacctgctaagcccagcacacatcatg
gtggagaaagaaaggccatatgcctgtactggtccgtggcctgttattaactgggttgca
cggcaggagatggggccgtccagttgtaggaaaacaagctcaggactcccactgattcta
cattatgagcatgaagactttttaacagttgcagagtcactgaagaaagaatttgatagt
ccagaaactgctgatctgaagtttcgaattgatggaaaatatattcatgtccataaagct
gttttgaaaatcaggtgtgagcattttcgatccatgttccagtcgtattggaatgaagac
atgaaggaagtgatagaaatcgatcagttttcttacccagtgtatcgtgcctttctccag
tacctctacacagacacagtcgacctgccgccagaagatgctataggtcttctggatttg
gcgacatcttactgtgaaaacagactgaaaaaactttgtcagcacattatcaagagagga
attactgtggagaatgccttttcgctattctctgctgcagtcagatatgatgcagagtgc
ctggcacatattaggcacctgataaatgttgaactggatgaagatagtaccttaaaggaa
gcattaaggatgatcagtgagctgaaggcgggtatggttggtttcacagattcagagaga
ataaaagttactttaacaacaggttggacagagttaggtgtggttcgtgatcttgtgtca
tctggaatgtgtcttgtggggagctgtgatgccgaggcacctgctcaccctggttag

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_7|157_aa
MKTLAVFPGGNVSLLETKTFDPVGYICEDENINSLTGSLGLIASGDTAAPTPWIHLPDMF
TQVLLIGLQPKETDFSFFEQNRPLLVNSLNCHYFGQATSFSLWGGRPTLPTAKPSRGAEQ
EPVPRAFLVPQTQKPLSPGSSHRISWGHSSGRASGRA

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_7|474_bp
atgaagactcttgctgtgttccctggtggaaatgtttccctgttggaaaccaagaccttc
gaccctgtgggctacatttgtgaggatgaaaacataaattctttaactgggtcactggga
ctgatagcaagtggggacactgctgctcccacaccatggattcatctcccagacatgttt
acacaagttcttttgatcgggttgcaaccaaaagaaactgattttagtttctttgagcaa
aacaggcctcttctagtaaattcactcaactgccactactttgggcaagccacttcattc
agtctctggggtggtaggccgaccctccccacagccaagccatctcggggagcagagcag
gagcccgtgcctcgcgcgttcctggttcctcagacacaaaagcctctaagtcccggcagc
agccaccggatttcatggggacactccagtggcagggcctcggggcgggcctga

>gi568815585f:49396002_49628662|GENSCAN_predicted_peptide_8|238_aa
MARLQAASGGSCVALTTESETGTAIKGPAGSQGWIWLISRGGHSWVEETEEKGPEVVVPG
GMTKKDLKSAVIHGDSQRGQHLASESVFGFSGILLICNPPQNSLEQKSVCLCFPRTLTTN
KAFMIENESIGNILQEIFIQQMACGSCFPVFLSPRLRAPLASLAVSGQRDVFQVRLLTVG
AGSWVWASCHGLLLGVQPQWGSFASLPPPTPLHLAAWTILAPPSSLSGEKTTHLRATR

>gi568815585f:49396002_49628662|GENSCAN_predicted_CDS_8|717_bp
atggccaggctgcaggctgcctctggaggtagctgcgtggcactgaccacagaatctgag
acaggcaccgccatcaaggggccggctggcagtcaggggtggatctggcttatcagtaga
ggaggacatagctgggtagaggaaactgaagagaagggaccagaagtggtggtgccaggt
gggatgaccaagaaagaccttaaatcagcagtcatccatggtgacagccagaggggccag
catcttgcctctgaatcagtatttggtttcagtggaatattgctgatctgtaaccctcca
cagaactccctagaacagaaatctgtctgcctctgctttcctaggacgctgaccacaaat
aaagctttcatgatagagaatgaatccataggaaacatcctgcaagaaatatttattcag
caaatggcatgtggaagctgtttccctgtgttcctaagtcccaggctgcgagcaccactc
gcctccctcgcggtgtctggacagcgggatgtcttccaggttcgtctcctcactgttggc
gccgggtcctgggtgtgggcctcctgccacggactcctcctcggggtgcagccacagtgg
ggatcctttgcatctttgccgcccccaacgcctctgcacttggctgcctggactattttg
gccccacccagcagccttagtggagagaaaacaacgcacctgcgtgccacacgatga