GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:08:17

Sequence gi568815581r:35883804_36086649 : 202846 bp : 44.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16735  16783   49  0  1   90   94    57 0.672   5.93
 1.02 Term +  17227  17237   11  2  2  124   45     1 0.588  -2.24
 1.03 PlyA +  19674  19679    6                               1.05

 2.10 PlyA -  19833  19828    6                               1.05
 2.09 Term -  25199  24927  273  2  0   49   47   147 0.542   2.17
 2.08 Intr -  25935  25655  281  1  2   33  105   114 0.647   4.80
 2.07 Intr -  26429  26266  164  1  2   47   76    95 0.308   3.82
 2.06 Intr -  31464  31346  119  0  2   59   50    88 0.271   1.36
 2.05 Intr -  36469  36360  110  2  2   55   44   102 0.406   2.50
 2.04 Intr -  40969  40801  169  1  1   39   66    93 0.800   1.72
 2.03 Intr -  41834  41712  123  2  0   65   92    81 0.991   6.98
 2.02 Intr -  46452  46273  180  0  0   74   98    83 0.967   7.96
 2.01 Init -  46924  46829   96  1  0   91   58    96 0.970   7.21
 2.00 Prom -  47007  46968   40                              -7.66

 3.00 Prom +  48101  48140   40                              -3.86
 3.01 Init +  48348  48366   19  2  1   81  117     6 0.255   3.24
 3.02 Intr +  51002  51132  131  0  2   73   97    13 0.275   1.11
 3.03 Term +  52551  52688  138  2  0   85   48   131 0.336   6.76
 3.04 PlyA +  52720  52725    6                               1.05

 4.05 PlyA -  52784  52779    6                              -1.95
 4.04 Term -  53030  52948   83  0  2  129   55    55 0.641   4.16
 4.03 Intr -  54113  53955  159  0  0   97   47   182 0.904  14.96
 4.02 Intr -  55554  55415  140  2  2   80   74   145 0.422  12.41
 4.01 Init -  69403  69258  146  1  2   79   98   123 0.807  11.99
 4.00 Prom -  71337  71298   40                              -3.26

 5.00 Prom +  77527  77566   40                              -6.36
 5.01 Init +  77782  77859   78  0  0   83   39    93 0.687   4.96
 5.02 Intr +  88019  88056   38  1  2   77   67    70 0.540   0.86
 5.03 Term +  89706  89778   73  0  1  111   41    92 0.858   4.18
 5.04 PlyA +  93535  93540    6                               1.05

 6.04 PlyA -  93642  93637    6                               1.05
 6.03 Term -  93928  93763  166  0  1   95   45   220 0.994  15.79
 6.02 Intr -  94481  94340  142  0  1   49   77    73 0.586   1.71
 6.01 Init -  97617  97542   76  0  1   67   89   118 0.911   9.07
 6.00 Prom -  97886  97847   40                              -5.46

 7.04 PlyA -  98318  98313    6                               1.05
 7.03 Term - 100085  99998   88  1  1  120   48   138 0.996  10.13
 7.02 Intr - 100649 100535  115  0  1   97   25   129 0.912   7.01
 7.01 Init - 102846 102768   79  0  1   76   94   127 0.871  13.36
 7.00 Prom - 107590 107551   40                              -3.86

 8.05 PlyA - 107864 107859    6                               1.05
 8.04 Term - 114057 113964   94  2  1  119   38    65 0.966   1.90
 8.03 Intr - 114588 114477  112  1  1   88  103    84 0.973   9.34
 8.02 Intr - 115122 115063   60  1  0   94   98    11 0.712   1.41
 8.01 Init - 117689 117614   76  2  1   65  101   119 0.970  10.19
 8.00 Prom - 118347 118308   40                              -4.66

 9.08 PlyA - 119667 119662    6                               1.05
 9.07 Term - 124612 124401  212  2  2   96   44   129 0.972   6.76
 9.06 Intr - 124800 124722   79  0  1   79   93    34 0.411   2.12
 9.05 Intr - 125828 125787   42  2  0  104   63    31 0.157   0.64
 9.04 Intr - 129505 129448   58  0  1  113   41    48 0.248   1.49
 9.03 Intr - 130106 129941  166  0  1  102   53   154 0.932  12.32
 9.02 Intr - 130590 130531   60  1  0  116   98    30 0.968   5.51
 9.01 Init - 134094 134019   76  0  1   65  113   104 0.962   9.94
 9.00 Prom - 135576 135537   40                              -7.26

10.03 PlyA - 135961 135956    6                               1.05
10.02 Term - 137102 136195  908  0  2  -29   45   349 0.544  11.36
10.01 Init - 138857 138353  505  2  1   74    0   254 0.428  10.35
10.00 Prom - 140667 140628   40                              -5.16

11.00 Prom + 145904 145943   40                              -6.16
11.01 Init + 146145 146184   40  2  1   38  116    24 0.077   0.55
11.02 Intr + 153061 153136   76  2  1   84   72    29 0.040  -0.53
11.03 Intr + 157061 157161  101  2  2   44   95    50 0.089   1.05
11.04 Intr + 163198 163366  169  2  1   24   86   114 0.170   3.80
11.05 Intr + 163546 163713  168  1  0   54   68   112 0.135   4.86
11.06 Intr + 180536 180606   71  2  2   87  113    59 0.000   7.13
11.07 Intr + 186644 186755  112  0  1  108  103    76 0.986  10.54
11.08 Term + 187148 187238   91  2  1  128   55   146 0.999  12.49
11.09 PlyA + 188206 188211    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 180540 180606   67  2  1   86  113   127 0.973  14.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_1|19_aa
MPHPLHDALHPEATLGAAF

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_1|60_bp
atgccccaccctctgcatgacgccctgcatcctgaagccaccctgggagctgctttttga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_2|504_aa
MAELVPFAVPIESDKTLLVWELSSGPTAEALHHSLFTAFSQFGLLYSVRVFPNAAVAHPG
FYAVIKFYSARAAHRAQKACDRKQLFQKSPVKVRLGTRHKAVQHQALALNSSKCQELANY
YFGFNGCSKRIIKLQELSDLEERENEDSMVPLPKQSLKFFCALEVVLPSCDCRSPGIGLV
EEPMDKVEEESGKIAVEYRPSEDIVGVRCEEELHGLIQVCEDKNSGQFQHLKDQQEMIIQ
QLNTPENDELPPVPQEPTTQSPAQTLAPSGSGTLSNSAKLSSSDSIPPMEAEPSPNQQEA
TVQASEPPKNIELSSQQMVPENIFPPTMENSNQLPEPPTEVVAQLPPRYEVTIPTQGQDQ
AQLSTLASVTLQPLDLGFIITPESTTEIELSPTMQETPTQPPKEFVPQPPVYQEHPEMTH
PPPDKNQAQHPNLTQFTVQSLDLELTITTEPTTEVKTSPTMEETSTQPSDLGFAIVPELT
IETEHSTGLDKTTAPHPDQVQTQH

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_2|1515_bp
atggcggagttggtaccttttgcggttcccatcgagagtgacaaaaccttgctagtgtgg
gagctgagctccggacccacggccgaggctttgcatcattctctgttcacagcattttct
cagtttggccttctgtattcagtccgggtcttcccaaatgctgcagtggcccatcctggt
ttctatgccgtcattaagttttattctgcaagggctgcccacagagcccaaaaggcatgc
gaccggaagcagctttttcagaaatctccagtcaaggttcgtcttggcaccagacataag
gcagttcaacatcaagcccttgccctgaacagttccaaatgccaagaactggcgaattac
tactttggtttcaatgggtgttccaaaaggatcatcaagcttcaggagctttctgacctt
gaagaaagggaaaatgaagatagcatggtgccacttccgaagcaaagcctgaagttcttc
tgtgctttagaagtggtgttgccatcctgtgattgcaggagtcctggcattggcttggtg
gaggagcctatggataaggtggaggaagaaagtggtaaaatagctgtggagtacagaccc
agtgaagacatcgtaggtgtcagatgcgaagaagaactacacggtttaattcaagtatgt
gaagataaaaactcagggcagtttcagcatttgaaagaccagcaagaaatgattattcag
cagctaaatacccctgaaaatgatgaacttcctccagtccctcaagagcccacaactcag
tcaccagctcagactttagctccctcaggaagtggaaccctctctaactcagcaaaactt
tccagctcagactccataccccctatggaggcagagccttctccaaaccagcaggaggcc
acagttcaggcttcagagccccccaagaatatagaactttcaagccagcagatggtccca
gagaatatatttcctccaaccatggagaactcaaatcaacttccagaaccacctacggag
gttgtagctcaacttccacctcgttatgaggtgacaattccaacacaaggtcaggatcaa
gctcagctttcaacactggccagtgtcacacttcaacctttggacctggggtttatcatc
actccagaatccactacagaaattgaactttctccaaccatgcaggagaccccaactcag
cctcctaaggaatttgtaccccaacctccagtatatcaagagcatcctgaaatgacacat
ccacctccagacaagaaccaggctcagcatccaaacctgactcaattcacagttcaatct
ttggacctggagcttaccataactacagaacctactacagaggttaaaacttctccaacc
atggaggagacctcaactcagccttcagacctgggatttgccatagttccagaactcacc
atagagactgaacattctacaggcctggacaagactacagctccacatccagaccaagtt
cagactcagcattga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_3|95_aa
MGIVGSGGILSASRRVAGLNSATSILPCGEKRHGSCLTLSNSSTHMTQFLTVEQRKSAER
EVKQMHQEKLKPAMDSVLTISSPGSMLFLRPSCSP

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_3|288_bp
atgggcatagtgggctccggcggcatcctgtcagccagtagaagagtggccggcctgaac
agtgcaacctccattctaccctgcggagaaaaaagacatggttcttgcctcacactcagt
aactcttccacacacatgacccagttcttgactgtggagcagagaaagtctgcggagaga
gaagtgaagcaaatgcaccaagagaagctgaaacctgccatggacagtgtgctgacaatt
tccagccctggttccatgctcttcctgaggcccagctgcagcccttga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_4|175_aa
MRKNQCKNAENSKNQNASSPPNDRNTAPARAQNWMENEIDKLTEVGFRRMTKALLIYLVS
SFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINENADGSFD
YGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGARGMNNW

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_4|528_bp
atgaggaaaaaccaatgcaaaaacgctgaaaattccaaaaaccagaatgcctcttctcct
ccaaatgatcgcaacaccgctccagcaagggcacaaaactggatggagaatgagattgac
aaattgacagaagtaggcttcagaaggatgacaaaggcgctactcatctatttggtcagc
agctttcttgccctaaatcaggccagcctcatcagtcgctgtgacttggcccaggtgctg
cagctggaggacttggatgggtttgagggttactccctgagtgactggctgtgcctggct
tttgtggaaagcaagttcaacatatcaaagataaatgaaaatgcagacggaagctttgac
tatggcctcttccagatcaacagccactactggtgcaacgattataagagttactcggaa
aacctttgccacgtagactgtcaagatctgctgaatcccaaccttcttgcaggcatccac
tgcgcaaaaaggattgtgtccggagcacgggggatgaacaactggtga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_5|62_aa
MKNQIEKQYDIDETQKRTDRNFQENKILYQKLAVVTAALPLNSDSLALTLVLAKDFETSC
RI

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_5|189_bp
atgaagaatcaaatcgagaaacaatatgacatagatgaaacacagaagagaactgacagg
aacttccaggagaacaagatcctgtaccagaagctggcagttgtcacagcagccctgcct
ttgaactctgactccctggctttgaccctggtgctggctaaggactttgaaacttcttgc
cgcatctga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_6|127_aa
MKVSEAALSLLVLILIITSASRSQPTCNVIPSEVPEWVNTPSTCCLKYYEKVLPRRLVVG
YRKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNLPLLPTRNLSTVKIITAKNGQ
PQLLNSQ

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_6|384_bp
atgaaggtctccgaggctgccctgtctctccttgtcctcatccttatcattacttcggct
tctcgcagccagccaacttgcaatgtgattccttcagaagttcctgagtgggtgaacacc
ccatccacctgctgcctgaagtattatgagaaagtgttgccaaggagactagtggtggga
tacagaaaggccctcaactgtcacctgccagcaatcatcttcgtcaccaagaggaaccga
gaagtctgcaccaaccccaatgacgactgggtccaagagtacatcaaggatcccaaccta
cctttgctgcctaccaggaacttgtccacggttaaaattattacagcaaagaatggtcaa
ccccagctcctcaactcccagtga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_7|93_aa
MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS
KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_7|282_bp
atgaagatctccgtggctgccattcccttcttcctcctcatcaccatcgccctagggacc
aagactgaatcctcctcacggggaccttaccacccctcagagtgctgcttcacctacact
acctacaagatcccgcgtcagcggattatggattactatgagaccaacagccagtgctcc
aagcccggaattgtcttcatcaccaaaaggggccattccgtctgtaccaaccccagtgac
aagtgggtccaggactatatcaaggacatgaaggagaactga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_8|113_aa
MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ
SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_8|342_bp
atgaaggtctccgtggctgccctctcctgcctcatgcttgttgctgtccttggatcccag
gcccagttcacaaatgatgcagagacagagttaatgatgtcaaagcttccactggaaaat
ccagtagttctgaacagctttcactttgctgctgactgctgcacctcctacatctcacaa
agcatcccgtgttcactcatgaaaagttattttgaaacgagcagcgagtgctccaagcca
ggtgtcatattcctcaccaagaaggggcggcaagtctgtgccaaacccagtggtccggga
gttcaggattgcatgaaaaagctgaagccctactcaatataa

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_9|230_aa
MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH
AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ
GLNLKAGIEFQTKKEGEHTDGKVQELGQALLGSGPMVASKGPCLTSWKNQVIVQEDLNDG
ECGDFNELWMWLLWDEWGAGEWMEWEDDLPLEFSHPAADLLFNCPQPNFS

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_9|693_bp
atgaaggtctccgtggctgccctctcctgcctcatgcttgttactgcccttggatcccag
gcccgggtcacaaaagatgcagagacagagttcatgatgtcaaagcttccattggaaaat
ccagtacttctggacatgctctggaggagaaagattggtcctcagatgaccctttctcat
gctgcaggattccatgctactagtgctgactgctgcatctcctacaccccacgaagcatc
ccgtgttcactcctggagagttactttgaaacgaacagcgagtgctccaagccgggtgtc
atcttcctcaccaagaaggggcgacgtttctgtgccaaccccagtgataagcaagttcag
ggcctcaacctgaaggctggaattgagtttcagacaaaaaaggagggggaacacacagat
gggaaggtgcaggagctggggcaagcacttttgggctctggccccatggtagcatccaaa
ggtccttgtctgacatcctggaagaatcaggtcatcgttcaagaagacttgaacgatggt
gaatgtggagattttaatgagttatggatgtggctcttatgggatgaatggggagctgga
gaatggatggagtgggaagatgatcttcccttggagttcagccatcccgcggctgatctc
ctcttcaactgtccccagccgaacttctcctga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_10|470_aa
MKENLCKKAENSKNQNASSPPKDHNSSPAREQNWMENEFDESTEVGFRRWVLTNSSKLKE
HVVTQCKEAKNLDKRLQELLTRIASLEKSINDLIELKNTARELREAYTSINSRIDQAEER
ISETEDHLNEIKHEDKIREKRMKRNEQSLQEIWDYVKRPNLHLICVPEKLRIKKLTQNCT
TTWKLNNLLLNDYWVNNKVKAEINKFFETNGNKDTTYQNLWDTAKVVFRGKFIALNVHIR
KWERSKIDTLTSQLKELEKQEQTNSKANRRQEITKIRAELKEIETQKTLQKINESRCWFF
EKINKIDRLLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTAIREYDKHLYANKPENLE
EMDKFLDTYTLPRLNQEEVESLNRPITSSEIEAVIDSLPTKKSTGPDGFTAEFYQRYKEE
LVPFLLKLFQSTEKEGLLPNSFYEASIILIPKPGKDKTTTTTKEISGQYP

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_10|1413_bp
atgaaggaaaacctttgcaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactcctcgccagcaagggaacaaaactggatggagaatgagtttgat
gaatcgacagaagtaggcttcagaaggtgggtactaacaaactcctccaagctaaaggag
catgttgtaacccaatgcaaggaagctaagaaccttgataaaaggttacaggaactgcta
actagaatagccagtttagagaagagcataaatgatctgatagagctgaaaaacacagca
cgagaacttcgtgaagcatacacaagtatcaatagccgaattgatcaagcagaagaaagg
atatcagagactgaagatcaccttaatgaaataaagcatgaagacaagattagagaaaaa
agaatgaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaac
ctacatttgatttgtgtacctgaaaaactcaggattaagaaactcactcaaaactgcaca
actacatggaaactgaacaacctgctcctgaatgactactgggtaaacaacaaagttaag
gcagaaataaataagttctttgaaaccaatgggaacaaagacacaacgtaccagaatctc
tgggacacggcaaaagtagtgtttagagggaaatttatagcactaaatgtccacattaga
aagtgggaaagatccaaaattgacaccctaacatcacaattaaaagaactagagaagcaa
gagcaaacaaattcgaaagctaacagaagacaagaaataactaagatcagagcagaactg
aaggagatagagacacaaaaaaccctgcaaaaaatcaatgaatccaggtgctggtttttt
gaaaagattaacaaaatagatagactgctagccagactaataaaaaagaaaagagagaag
aatcaaatagacacaataaaaaatgataaaggggatatcaccactgatcccacagaaata
caaactgccatcagagaatacgataaacacctctatgcaaataaaccagaaaatctagaa
gaaatggataaattcctagacacatacaccctcccaagactaaaccaggaagaagttgaa
tccctgaatagaccaataacgagttctgaaattgaggcagtaattgatagcctaccaacc
aaaaaaagcacaggaccagatggattcacagccgaattctaccagaggtacaaagaggag
ctggtaccattccttctgaaattattccaatcaacagaaaaagagggactcctccctaac
tcattttatgaggccagcatcatcctgataccaaaacctggcaaagacaaaacaacaaca
acaacaaaggaaatttctggccaatatccctga

>gi568815581r:35883804_36086649|GENSCAN_predicted_peptide_11|275_aa
MFAKLTSEEKGDKGMFRYTNTHHCVTTAYSILYSSMLHRPCRGLIPVADVFLDPHLAGVG
IDLSSLLCGGSNERRSKLPVNGHDPNGKLREDSQDLSENPWEEAGAQERKAARVWQTLTY
EELGVPWKRSYLKQQMPYLLFTHYGPLPCQGTSALTLHYQIPCKHTPELTLNLAPTGDQW
VPGELIMKGLAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQC
PKPGVILLTKRGRQICADPNKKWVQKYISDLKLNA

>gi568815581r:35883804_36086649|GENSCAN_predicted_CDS_11|828_bp
atgtttgctaagttgacaagtgaggaaaagggagacaaaggtatgtttaggtacacaaat
actcaccactgtgttacaactgcctacagtattctgtacagtagcatgctgcacagacct
tgccggggtttaattccagttgctgatgtattcctggacccacaccttgctggagttggc
atagacctttccagtctcctctgtggaggaagcaatgaaagaagatcgaagttacctgtt
aatggtcatgatccaaatggaaaactgagggaagacagccaggacctgtcagagaaccca
tgggaagaagctggggcacaagaaaggaaagcagcaagagtctggcagacattgacctat
gaggaacttggggtcccatggaaaaggtcctacctgaaacagcagatgccatacttgttg
ttcacccattatgggccactgccctgccagggaacctcggcccttacgttgcattaccag
atcccctgcaaacatactccagaactcactctgaatttggcacccacaggggatcagtgg
gtccctggagagctcatcatgaagggccttgcagctgccctccttgtcctcgtctgcacc
atggccctctgctcctgtgcacaagttggtaccaacaaagagctctgctgcctcgtctat
acctcctggcagattccacaaaagttcatagttgactattctgaaaccagcccccagtgc
cccaagccaggtgtcatcctcctaaccaagagaggccggcagatctgtgctgaccccaat
aagaagtgggtccagaaatacatcagcgacctgaagctgaatgcctga