GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:07:16

Sequence gi568815587r:105038816_105239079 : 200264 bp : 36.42% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    120    115    6                               1.05
 1.05 Term -   1032    812  221  1  2   58   38   109 0.177  -0.88
 1.04 Intr -   5843   5577  267  0  0   70  110   288 0.965  25.78
 1.03 Intr -  27483  27196  288  1  0   39   89   216 0.288  13.09
 1.02 Intr -  32055  31789  267  1  0   76  110   202 0.820  17.78
 1.01 Init -  32690  32684    7  2  1   78  117    11 0.829   3.46
 1.00 Prom -  37878  37839   40                              -5.65

 2.06 PlyA -  40637  40632    6                               1.05
 2.05 Term -  41004  40930   75  0  0  104   49    84 0.438   2.96
 2.04 Intr -  42762  42641  122  1  2   43   31   150 0.023   4.09
 2.03 Intr -  57379  57167  213  2  0   41   73   136 0.074   5.16
 2.02 Intr -  61964  61698  267  0  0   70  110   203 0.984  17.28
 2.01 Init -  62599  62593    7  1  1   89  117    11 0.961   4.56
 2.00 Prom -  70772  70733   40                              -3.85

 3.00 Prom +  70924  70963   40                              -5.95
 3.01 Sngl +  74115  74675  561  2  0   57   43   349 0.998  23.18
 3.02 PlyA +  75416  75421    6                               1.05

 4.03 PlyA -  78230  78225    6                               1.05
 4.02 Term -  83974  83843  132  1  0    6   38   126 0.122  -3.49
 4.01 Init -  91641  91477  165  0  0   62   64   131 0.719   7.78
 4.00 Prom -  95224  95185   40                              -4.15

 5.03 PlyA -  95584  95579    6                               1.05
 5.02 Term - 100263  99998  266  1  2   72   45   172 0.359   5.99
 5.01 Init - 100911 100905    7  0  1  105  105     7 0.949   4.83
 5.00 Prom - 101044 101005   40                              -5.15

 6.06 PlyA - 101638 101633    6                               1.05
 6.05 Term - 109382 109234  149  0  2   80   50    85 0.119   0.98
 6.04 Intr - 117231 117112  120  1  0   86   75    99 0.046   7.95
 6.03 Intr - 124349 124304   46  2  1   52   68    42 0.040  -4.34
 6.02 Intr - 124552 124454   99  1  0   61   77    67 0.033   2.29
 6.01 Intr - 155888 155713  176  0  2   59  106   169 0.909  14.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   6482   6476    7  2  1   89  117    11 0.979   4.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:105038816_105239079|GENSCAN_predicted_peptide_1|349_aa
MADMILLKKRRLLINSLGEGTINGLLDELLETNVLSQEDTEIVKCENVTVIDKARDLLDS
VIRKGARACEICITYICEEDRYLAGTLGLSAGSMRVNYIVQNQWYGLFQEMTTELEAFAH
RPEHKTSDSTFPVFLSHGVREGICGKKYSEQVRDILQLNEIFKMLNSKNCPSLKDKPKVI
IFEACCGDKVLKEKRKLFIHSMGEGTINGLLDELLQTRVLNQEEMEKVKRENATVMDKTR
ALIDSVIPKGAQACQICITYICEEDSYLAETLGLSAVFDIFIFEETVGPCNLVAQCLAFH
DMRLKAYGSTFPDIWSSHGFCFWDVTLTCFNSVVHGSGCGRNPHVKYFS

>gi568815587r:105038816_105239079|GENSCAN_predicted_CDS_1|1050_bp
atggccgacatgatcctcctgaagaagagacggctgcttatcaattcattgggtgaaggt
acaataaatggcttactggatgaattattggagacaaatgtgctgagccaggaagacaca
gagatagtaaaatgtgaaaatgttacagttatcgataaggcccgagatttgcttgactct
gttattcggaaaggggcacgggcatgtgaaatttgcatcacatacatttgtgaagaagac
aggtacctggcagggacgctgggactctcagcaggttccatgagagttaattacatagtc
caaaatcagtggtatggtctctttcaggaaatgactacagagctggaggcatttgctcac
cgcccagagcacaagacctctgacagcaccttcccggtgttcttgtctcatggtgttcgg
gaaggcatttgtgggaagaaatactctgaacaagtccgtgatatattacaactcaatgaa
atatttaaaatgttgaatagcaagaactgcccaagtttgaaggacaaacccaaggtgatc
atcttcgaggcctgctgtggtgacaaggtcctgaaggagaagagaaagctgtttatccat
tccatgggtgaaggtacaataaatggcttactggatgaattattacagacaagggtgctg
aaccaggaagagatggagaaagtaaaacgtgaaaatgctacagttatggataagacccga
gctttgattgactccgttattccgaaaggggcacaggcatgccaaatttgcatcacatac
atttgtgaagaagacagttacctggcagagacgctgggactctcagcagtttttgacatc
ttcatttttgaggaaacagtgggcccttgcaatctagtggctcagtgtttagctttccat
gacatgagactcaaggcttatggttctacattcccagatatatggtctagtcatggcttc
tgtttctgggatgtcactctgacatgcttcaactcagtggttcatggctctggctgtggg
cgaaaccctcatgtgaaatactttagttaa

>gi568815587r:105038816_105239079|GENSCAN_predicted_peptide_2|227_aa
MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS
VIRKGAPACQICITYICEEDSHLAGTLGLSAGNDYRVGGIFSAPRAQGLWSHGIREGICG
KKYSEQVPDVLQLNEIFKTLNSKNCPSLKDKPKVIIIQACHVEFQELLDCVKTPAAQCLP
KQLPTRTAAVGLPSFVLRPKALMDLTLRSILHTTFGSPVLYNDAEKA

>gi568815587r:105038816_105239079|GENSCAN_predicted_CDS_2|684_bp
atggccgacaaggtcctgaaggagaagagaaagcagtttatccgttcagtgggcgaaggt
acaataaatggcttactgggtgaattattggagacaagggtgctgagccaggaagagata
gagatagtaaaatgtgaaaatgctacagttatggataaggcccgagctttgcttgactct
gttattcggaaaggggctccagcatgccaaatttgcatcacatacatttgtgaagaagac
agtcacctggcagggacgctgggactctcagcaggaaatgactacagagttggaggtatt
ttctctgcaccaagagcacaaggcctctggtctcatggtattcgggaaggcatttgtggg
aagaaatactctgagcaagtcccagatgtattacaactcaatgaaatctttaaaacgttg
aatagcaagaactgcccaagtttgaaggacaaacccaaggtgataatcatccaggcctgc
catgttgagttccaggagctgctggactgtgtaaaaactcctgcagctcagtgcctgccc
aaacagctgccaaccagaacagcagccgtgggtctgcccagttttgtgttgagacccaag
gccctgatggacttaactctccgatccattctgcacacaactttcgggtctcctgtctta
tataacgacgctgaaaaagcctaa

>gi568815587r:105038816_105239079|GENSCAN_predicted_peptide_3|186_aa
MNNIPELLDYVKRPNLRLIEVPERDGESGTKLTNILQDVIQENIHNLARQTNIQIQEIQT
TPVRYSTRRSIPRQIISRFSKVEMKEKMLRAARERGQVTYKGKPIRIAADFSAETLQARK
FWGPIVNIHKENNFQPRISYLAKLSFISEGEIKFFSDKQMLKDFVTSRLTLQEVLKEALG
MERKIC

>gi568815587r:105038816_105239079|GENSCAN_predicted_CDS_3|561_bp
atgaacaatattccagaactattagactatgtaaaaagaccaaacctacgactgattgaa
gtacctgaaagagatggggagagtggaaccaagttgacaaacatacttcaggatgtcatc
caggagaacatccacaacctagcaagacagaccaacattcaaattcaggaaattcagaca
accccagtaagatactccacaagaagatcaatcccaagacagataatcagcagattctcc
aaggttgaaatgaaggaaaaaatgttaagggcagccagagagagaggccaggtcacctac
aaagggaagcccatcagaatagcagcggacttctcagcagaaaccctacaagccagaaaa
ttctggggaccaatagtcaacattcataaagaaaataatttccaacccagaatttcatat
ctggccaaattaagcttcataagtgaaggagaaataaaattcttttcagacaagcaaatg
ctgaaggattttgtcaccagcaggcttaccttgcaagaggtcctgaaggaagcactagga
atggaaaggaaaatctgttag

>gi568815587r:105038816_105239079|GENSCAN_predicted_peptide_4|98_aa
MVDPLTAYTVHQEKQQTLNDSSLKQPGGGAVPCKAMGADLPRTMGAHLLHPCDLNKNRSP
DFPFFRVRLSFEQPDDKAQMPSTERMTLTIRFYLFPEH

>gi568815587r:105038816_105239079|GENSCAN_predicted_CDS_4|297_bp
atggtagatccactgacagcttacactgttcaccaggaaaaacaacagacactcaatgac
agctcattaaagcagccaggagggggggctgtaccctgcaaagccatgggggcagatctg
cccaggaccatgggagcccaccttttacatccatgtgacctgaataaaaaccgttctcca
gactttcctttctttcgggttcgactttcatttgagcagccagatgataaagcacagatg
cccagcactgaaaggatgactttgacaatacgcttctacctcttcccagaacattaa

>gi568815587r:105038816_105239079|GENSCAN_predicted_peptide_5|90_aa
MADQLLRKKRRIFIHSVGAGTINALLDCLLEDEVISQEDMNKVRDENDTVMDKARVLIDL
VTGKGPKSCCKFIKHLCEEDPQLASKMGLH

>gi568815587r:105038816_105239079|GENSCAN_predicted_CDS_5|273_bp
atggctgaccaactcttgcgtaaaaagagaagaatttttatccattcagtgggtgcaggc
acaataaatgccttgctggattgcctattagaggatgaagttattagccaggaagacatg
aacaaagtgagagatgaaaatgacactgtcatggataaggctcgagtcttgattgacctt
gttactggaaaaggacccaagtcttgctgcaaatttatcaagcatctctgtgaagaagac
cctcaacttgcctcaaagatgggtttgcactaa

>gi568815587r:105038816_105239079|GENSCAN_predicted_peptide_6|196_aa
XQSLGPTEEHLLCQWYDSNLFCSHTGNHGLRSTGGDVQDCDAAGHRHLPYTVVMAVAFWL
VDRAMKDLKELIFEDVLIKIMPVFKVIIHHKLDALHSLAGERQDDESGSSPLSMIPMLLI
VFAEEQEGRQMPPTTASFWKKCWKSMEGSERRSGIMMKNQILQLGHLDLNSGSATSLLCD
IGKVFKLCASFFLSVK

>gi568815587r:105038816_105239079|GENSCAN_predicted_CDS_6|591_bp
ntacaatctctggggcccacagaagaacatctcttatgccagtggtatgattcaaattta
ttttgttctcacactgggaaccatggattgcgctctactggtggtgatgtccaggactgt
gatgcagctggacacagacacttgccttatactgttgttatggctgtggctttttggttg
gtggacagagccatgaaggatctaaaagaactgatatttgaggacgtcttgataaagata
atgcctgttttcaaagtaattattcatcacaagttggacgctctgcattccttggctggt
gaaagacaggatgatgaatcaggatcctctcccctttctatgattccgatgctgctgatt
gtctttgccgaggaacaggaaggaagacaaatgcccccaactactgcttcattctggaag
aagtgttggaagtcaatggaaggttctgagagacggtctggaataatgatgaagaaccag
attctgcagctgggccacctggatttgaattctggctctgccacttccttgctttgtgac
attgggaaggtgttcaagctctgtgcttcatttttcttatctgtaaaatga