Result of FASTA (ccds) for pF1KB6571
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6571, 375 aa
  1>>>pF1KB6571 375 - 375 aa - 375 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2355+/-0.000789; mu= 17.1442+/- 0.047
 mean_var=69.1051+/-13.583, 0's: 0 Z-trim(107.8): 38  B-trim: 0 in 0/51
 Lambda= 0.154283
 statistics sampled from 9742 (9779) to 9742 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.3), width:  16
 Scan time:  2.640

The best scores are:                                      opt bits E(32554)
CCDS2303.1 MSTN gene_id:2660|Hs108|chr2            ( 375) 2589 585.2 3.1e-167
CCDS8891.1 GDF11 gene_id:10220|Hs108|chr12         ( 407) 1383 316.8 2.1e-86
CCDS4503.1 BMP6 gene_id:654|Hs108|chr6             ( 513)  313 78.7 1.3e-14
CCDS1701.1 GDF7 gene_id:151449|Hs108|chr2          ( 450)  306 77.1 3.4e-14
CCDS34926.1 GDF6 gene_id:392255|Hs108|chr8         ( 455)  301 76.0 7.4e-14
CCDS1521.1 TGFB2 gene_id:7042|Hs108|chr1           ( 414)  298 75.3 1.1e-13
CCDS1890.1 BMP10 gene_id:27302|Hs108|chr2          ( 424)  298 75.3 1.1e-13
CCDS44318.1 TGFB2 gene_id:7042|Hs108|chr1          ( 442)  298 75.3 1.1e-13
CCDS9846.1 TGFB3 gene_id:7043|Hs108|chr14          ( 412)  297 75.1 1.3e-13
CCDS13099.1 BMP2 gene_id:650|Hs108|chr20           ( 396)  295 74.6 1.7e-13
CCDS13254.1 GDF5 gene_id:8200|Hs108|chr20          ( 501)  294 74.5 2.3e-13
CCDS33031.1 TGFB1 gene_id:7040|Hs108|chr19         ( 390)  290 73.5 3.5e-13
CCDS8581.1 GDF3 gene_id:9573|Hs108|chr12           ( 364)  289 73.3 3.9e-13
CCDS13455.1 BMP7 gene_id:655|Hs108|chr20           ( 431)  289 73.3 4.5e-13
CCDS4958.1 BMP5 gene_id:653|Hs108|chr6             ( 454)  282 71.8 1.4e-12
CCDS437.1 BMP8A gene_id:353500|Hs108|chr1          ( 402)  275 70.2 3.7e-12
CCDS9715.1 BMP4 gene_id:652|Hs108|chr14            ( 408)  274 70.0 4.3e-12
CCDS444.1 BMP8B gene_id:656|Hs108|chr1             ( 402)  272 69.5 5.8e-12
CCDS3588.1 BMP3 gene_id:651|Hs108|chr4             ( 472)  269 68.9 1.1e-11
CCDS73117.1 GDF10 gene_id:2662|Hs108|chr10         ( 478)  256 66.0 7.9e-11


>>CCDS2303.1 MSTN gene_id:2660|Hs108|chr2                 (375 aa)
 initn: 2589 init1: 2589 opt: 2589  Z-score: 3115.8  bits: 585.2 E(32554): 3.1e-167
Smith-Waterman score: 2589; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)

               10        20        30        40        50        60
pF1KB6 MQKLQLCVYIYLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 MQKLQLCVYIYLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LSKLRLETAPNISKDVIRQLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHATTETIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 LSKLRLETAPNISKDVIRQLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHATTETIIT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 MPTESDFLMQVDGKPKCCFFKFSSKIQYNKVVKAQLWIYLRPVETPTTVFVQILRLIKPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 MPTESDFLMQVDGKPKCCFFKFSSKIQYNKVVKAQLWIYLRPVETPTTVFVQILRLIKPM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KDGTRYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDENGHDLAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KDGTRYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDENGHDLAVT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 FPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 PKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 PKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQII
              310       320       330       340       350       360

              370     
pF1KB6 YGKIPAMVVDRCGCS
       :::::::::::::::
CCDS23 YGKIPAMVVDRCGCS
              370     

>>CCDS8891.1 GDF11 gene_id:10220|Hs108|chr12              (407 aa)
 initn: 1349 init1: 1088 opt: 1383  Z-score: 1664.6  bits: 316.8 E(32554): 2.1e-86
Smith-Waterman score: 1645; 65.1% identity (84.9% similar) in 352 aa overlap (34-375:58-407)

            10        20        30        40        50        60   
pF1KB6 LQLCVYIYLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQILSK
                                     : .: : .:.:::...  :.:.:: :::::
CCDS88 PAAAAAAAAAAAAAGVGGERSSRPAPSVAPEPDG-CPVCVWRQHSRELRLESIKSQILSK
        30        40        50        60         70        80      

            70        80        90       100        110       120  
pF1KB6 LRLETAPNISKDVIRQLLPKAPPLRELIDQYDVQRDD-SSDGSLEDDDYHATTETIITMP
       :::. :::::..:..:::::::::....: .: : :  . .  ::.:.:::::::.:.: 
CCDS88 LRLKEAPNISREVVKQLLPKAPPLQQILDLHDFQGDALQPEDFLEEDEYHATTETVISMA
         90       100       110       120       130       140      

            130       140       150       160       170       180  
pF1KB6 TESDFLMQVDGKPKCCFFKFSSKIQYNKVVKAQLWIYLRPVETPTTVFVQILRLIKPMKD
        :.:  .:.::.: :: :.:: :....::.:::::.:::::  :.::..::::: ::.  
CCDS88 QETDPAVQTDGSPLCCHFHFSPKVMFTKVLKAQLWVYLRPVPRPATVYLQILRL-KPLTG
        150       160       170       180       190       200      

                     190       200       210       220       230   
pF1KB6 ---------GTRYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDEN
                : :.  :::::....  .: ::::: : ::..:..::.:: ::::.:.: .
CCDS88 EGTAGGGGGGRRHIRIRSLKIELHSRSGHWQSIDFKQVLHSWFRQPQSNWGIEINAFDPS
         210       220       230       240       250       260     

           240       250       260       270       280       290   
pF1KB6 GHDLAVTFPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAF
       : :::::  ::: .::.::.:..: .. :::::..::::::::.::::::::::::::::
CCDS88 GTDLAVTSLGPGAEGLHPFMELRVLENTKRSRRNLGLDCDEHSSESRCCRYPLTVDFEAF
         270       280       290       300       310       320     

           300       310       320       330       340       350   
pF1KB6 GWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKMSPINMLYF
       ::::::::::::::::::.::..:.:::::::::.:::::::::::::::::::::::::
CCDS88 GWDWIIAPKRYKANYCSGQCEYMFMQKYPHTHLVQQANPRGSAGPCCTPTKMSPINMLYF
         330       340       350       360       370       380     

           360       370     
pF1KB6 NGKEQIIYGKIPAMVVDRCGCS
       : :.::::::::.:::::::::
CCDS88 NDKQQIIYGKIPGMVVDRCGCS
         390       400       

>>CCDS4503.1 BMP6 gene_id:654|Hs108|chr6                  (513 aa)
 initn: 279 init1: 168 opt: 313  Z-score: 376.0  bits: 78.7 E(32554): 1.3e-14
Smith-Waterman score: 351; 30.1% identity (53.6% similar) in 276 aa overlap (140-374:238-512)

     110       120       130       140        150        160       
pF1KB6 DYHATTETIITMPTESDFLMQVDGKPKCCFFKFS-SKIQYNKVVKA-QLWIYLRPVETP-
                                     :::. :.:  ..:: : .. ::   :    
CCDS45 FLNDADMVMSFVNLVEYDKEFSPRQRHHKEFKFNLSQIPEGEVVTAAEFRIYKDCVMGSF
       210       220       230       240       250       260       

          170       180       190       200       210       220    
pF1KB6 --TTVFVQILRLIKPMKDGTRYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLG
          : ...: ....  .       . . ..      : :  .:. .. . :.  :. :.:
CCDS45 KNQTFLISIYQVLQEHQHRDSDLFLLDTRVVWASEEG-WLEFDITATSNLWVVTPQHNMG
       270       280       290       300        310       320      

          230          240        250              260             
pF1KB6 IEIKALDENG---HDLAVTFPG-PGEDGLNPFL-------EVKVTDT---------PKRS
       ...... ..:   :  :. . :  :    .::.       ::.:  :          .:.
CCDS45 LQLSVVTRDGVHVHPRAAGLVGRDGPYDKQPFMVAFFKVSEVHVRTTRSASSRRRQQSRN
        330       340       350       360       370       380      

          270              280         290        300       310    
pF1KB6 RRDFGLDC-------DEHSTESR--CCRYPLTVDFEAFGW-DWIIAPKRYKANYCSGECE
       :   . :        : .:.: .  : .. : :.:. .:: ::::::: : ::::.::: 
CCDS45 RSTQSQDVARVSSASDYNSSELKTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECS
        390       400       410       420       430       440      

          320             330       340       350       360        
pF1KB6 FVFLQKYPHTH------LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMV
       : .  ..  :.      :::  ::.    :::.:::.. :..:::. . ..:  :   ::
CCDS45 FPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMV
        450       460       470       480       490       500      

      370     
pF1KB6 VDRCGCS
       :  ::: 
CCDS45 VRACGCH
        510   

>>CCDS1701.1 GDF7 gene_id:151449|Hs108|chr2               (450 aa)
 initn: 259 init1: 154 opt: 306  Z-score: 368.4  bits: 77.1 E(32554): 3.4e-14
Smith-Waterman score: 308; 29.8% identity (55.3% similar) in 228 aa overlap (166-374:226-449)

         140       150       160       170        180       190    
pF1KB6 KCCFFKFSSKIQYNKVVKAQLWIYLRPVETPTTVFVQILRLIK-PMKDGTRYTGIRSLKL
                                     :  .:  .:: .  :. .     ..: : .
CCDS17 YSRAAEPLVGQRWEAFDVADAMRRHRREPRPPRAFCLLLRAVAGPVPSPL---ALRRLGF
         200       210       220       230       240          250  

          200       210       220       230        240        250  
pF1KB6 DMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDEN-GHDLAVT-FPGPGEDGLNPF
           : :      .  :...  .. :: :  ::.:  .  :  ::   .: ::    .: 
CCDS17 GWPGGGGSAAEERAVLVVSSRTQRKES-LFREIRAQARALGAALASEPLPDPGTGTASPR
            260       270        280       290       300       310 

                  260       270          280       290        300  
pF1KB6 LEV------KVTDTPKRSRRDFGLDCDE-HSTE--SRCCRYPLTVDFEAFGWD-WIIAPK
         .      ... .  :. .  :    . :. .  ::: : :: :::. .::: ::::: 
CCDS17 AVIGGRRRRRTALAGTRTAQGSGGGAGRGHGRRGRSRCSRKPLHVDFKELGWDDWIIAPL
             320       330       340       350       360       370 

            310       320             330       340       350      
pF1KB6 RYKANYCSGECEFVFLQKY-PHTH-----LVHQANPRGSAGPCCTPTKMSPINMLYFNGK
        :.: .: : :.: . ..  : .:     :...  : .. . ::.:...:::..::... 
CCDS17 DYEAYHCEGLCDFPLRSHLEPTNHAIIQTLLNSMAPDAAPASCCVPARLSPISILYIDAA
             380       390       400       410       420       430 

        360       370     
pF1KB6 EQIIYGKIPAMVVDRCGCS
       ....: .   :::. ::: 
CCDS17 NNVVYKQYEDMVVEACGCR
             440       450

>>CCDS34926.1 GDF6 gene_id:392255|Hs108|chr8              (455 aa)
 initn: 213 init1: 147 opt: 301  Z-score: 362.3  bits: 76.0 E(32554): 7.4e-14
Smith-Waterman score: 315; 36.2% identity (63.1% similar) in 149 aa overlap (240-374:312-454)

     210       220       230       240        250       260        
pF1KB6 TVLQNWLKQPESNLGIEIKALDENGHDLAVTFPGP-GEDGLNPFLEVKVTDTPKRSRRDF
                                     ..: : :     :.:      .: : ::  
CCDS34 TRSQRKNLFAEMREQLGSAEAAGPGAGAEGSWPPPSGAPDARPWLP-----SPGRRRRRT
             290       300       310       320            330      

      270          280         290        300       310       320  
pF1KB6 GLDC---DEHSTESR--CCRYPLTVDFEAFGWD-WIIAPKRYKANYCSGECEFVFLQKY-
       ..      .:. .::  : . :: :.:. .::: ::::: .:.: .: : :.: . ..  
CCDS34 AFASRHGKRHGKKSRLRCSKKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLE
        340       350       360       370       380       390      

                  330        340       350       360       370     
pF1KB6 PHTH-----LVHQANPRGSAGP-CCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS
       : .:     :... .: ::. : ::.:::..::..::... ....: .   :::. ::: 
CCDS34 PTNHAIIQTLMNSMDP-GSTPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR
        400       410        420       430       440       450     

>>CCDS1521.1 TGFB2 gene_id:7042|Hs108|chr1                (414 aa)
 initn: 360 init1: 113 opt: 298  Z-score: 359.3  bits: 75.3 E(32554): 1.1e-13
Smith-Waterman score: 376; 24.9% identity (51.6% similar) in 397 aa overlap (39-375:24-414)

       10        20        30        40        50        60        
pF1KB6 YIYLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQILSKLRLET
                                     :..    :  .. :::::. ::::::.: .
CCDS15        MHYCVLSAFLILHLVTVALSLSTCSTLDMDQFMRK-RIEAIRGQILSKLKLTS
                      10        20        30         40        50  

       70           80        90       100       110       120     
pF1KB6 APNI---SKDVIRQLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHATTETIITMPT--
        :.     ..:  ...      :.:...   .:  . .    :..:.:     : ::   
CCDS15 PPEDYPEPEEVPPEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPPFF
             60        70        80        90       100       110  

            130       140          150         160       170       
pF1KB6 -ESDFLMQVDGKPKCCFFKFS-SKIQYN--KVVKAQLWIY--LRPVETPTTVFVQILRLI
          . .  .  .:   . .:. : .. :  ..:::.. ..    :        ... ...
CCDS15 PSENAIPPTFYRPYFRIVRFDVSAMEKNASNLVKAEFRVFRLQNPKARVPEQRIELYQIL
            120       130       140       150       160       170  

       180           190       200       210       220             
pF1KB6 KPMKDGT----RYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIK-----
       :  :: :    ::   . .:   .   : : :.::  ....::.. . :::..:.     
CCDS15 KS-KDLTSPTQRYIDSKVVKTRAE---GEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPC
             180       190          200       210       220        

               230       240                          250          
pF1KB6 ---------ALDENGHDLAVTFPG--------PGED-----------GLNPFL-------
                 . .....: . : :         :..           : .: :       
CCDS15 CTFVPSNNYIIPNKSEELEARFAGIDGTSTYTSGDQKTIKSTRKKNSGKTPHLLLMLLPS
      230       240       250       260       270       280        

            260       270       280       290        300       310 
pF1KB6 -EVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEA-FGWDWIIAPKRYKANYCSG
        ...  .: .:..: .      ..... ::  :: .::.  .:: ::  :: :.::.:.:
CCDS15 YRLESQQTNRRKKRALDAAYCFRNVQDNCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAG
      290       300       310       320       330       340        

             320          330       340       350       360        
pF1KB6 ECEFVFLQKYPHTH---LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMV
        : ... .   :..   : .  ::..::.:::.   . :...::. ::   :  ..  :.
CCDS15 ACPYLWSSDTQHSRVLSLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIE-QLSNMI
      350       360       370       380       390       400        

      370     
pF1KB6 VDRCGCS
       :  : ::
CCDS15 VKSCKCS
       410    

>>CCDS1890.1 BMP10 gene_id:27302|Hs108|chr2               (424 aa)
 initn: 307 init1: 136 opt: 298  Z-score: 359.1  bits: 75.3 E(32554): 1.1e-13
Smith-Waterman score: 298; 35.4% identity (57.6% similar) in 158 aa overlap (226-374:278-423)

         200       210       220       230       240        250    
pF1KB6 MNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDENGHDLAVTFP-GPGEDGLNPFLE
                                     ..  ::. : :   .:  ::::..:  .  
CCDS18 KHNPLLIVFSDDQSSDKERKEELNEMISHEQLPELDNLGLD---SFSSGPGEEALLQMRS
       250       260       270       280          290       300    

          260       270       280       290        300       310   
pF1KB6 VKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWD-WIIAPKRYKANYCSGEC
         . :.  : ::.        .  . : : :: .::. .::: :::::  :.:  : : :
CCDS18 NIIYDSTARIRRN--------AKGNYCKRTPLYIDFKEIGWDSWIIAPPGYEAYECRGVC
          310               320       330       340       350      

           320             330       340       350       360       
pF1KB6 EFVFLQKY-PHTH-----LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYG-KIPA
       .. . ..  :  :     :::  : . ..  ::.:::. ::..::.. :  . :  :  .
CCDS18 NYPLAEHLTPTKHAIIQALVHLKNSQKASKACCVPTKLEPISILYLD-KGVVTYKFKYEG
        360       370       380       390       400        410     

        370     
pF1KB6 MVVDRCGCS
       :.:..::: 
CCDS18 MAVSECGCR
         420    

>>CCDS44318.1 TGFB2 gene_id:7042|Hs108|chr1               (442 aa)
 initn: 360 init1: 113 opt: 298  Z-score: 358.9  bits: 75.3 E(32554): 1.1e-13
Smith-Waterman score: 338; 23.8% identity (49.8% similar) in 412 aa overlap (52-375:36-442)

              30        40        50        60        70           
pF1KB6 DLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQILSKLRLETAPNI---SKDVIR
                                     :::::. ::::::.: . :.     ..:  
CCDS44 LSAFLILHLVTVALSLSTCSTLDMDQFMRKRIEAIRGQILSKLKLTSPPEDYPEPEEVPP
          10        20        30        40        50        60     

       80        90       100       110                      120   
pF1KB6 QLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHAT------------TETI---ITMPT
       ...      :.:...   .:  . .    :..:.:             .::.   .: :.
CCDS44 EVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPPFFPSETVCPVVTTPS
          70        80        90       100       110       120     

                     130       140                150         160  
pF1KB6 ---------ESDFLM-QVDGKPKCCFFKFSSKIQYN---------KVVKAQLWIY--LRP
                .:. :   .:. :   .  .   ....         ..:::.. ..    :
CCDS44 GSVGSLCSRQSQVLCGYLDAIPPTFYRPYFRIVRFDVSAMEKNASNLVKAEFRVFRLQNP
         130       140       150       160       170       180     

            170       180           190       200       210        
pF1KB6 VETPTTVFVQILRLIKPMKDGT----RYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQ
               ... ...:  :: :    ::   . .:   .   : : :.::  ....::..
CCDS44 KARVPEQRIELYQILKS-KDLTSPTQRYIDSKVVKTRAE---GEWLSFDVTDAVHEWLHH
         190       200        210       220          230       240 

      220                     230       240                        
pF1KB6 PESNLGIEIK--------------ALDENGHDLAVTFPG--------PGED---------
        . :::..:.               . .....: . : :         :..         
CCDS44 KDRNLGFKISLHCPCCTFVPSNNYIIPNKSEELEARFAGIDGTSTYTSGDQKTIKSTRKK
             250       260       270       280       290       300 

         250               260       270       280       290       
pF1KB6 --GLNPFL--------EVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEA-FGWD
         : .: :        ...  .: .:..: .      ..... ::  :: .::.  .:: 
CCDS44 NSGKTPHLLLMLLPSYRLESQQTNRRKKRALDAAYCFRNVQDNCCLRPLYIDFKRDLGWK
             310       320       330       340       350       360 

        300       310       320          330       340       350   
pF1KB6 WIIAPKRYKANYCSGECEFVFLQKYPHTH---LVHQANPRGSAGPCCTPTKMSPINMLYF
       ::  :: :.::.:.: : ... .   :..   : .  ::..::.:::.   . :...::.
CCDS44 WIHEPKGYNANFCAGACPYLWSSDTQHSRVLSLYNTINPEASASPCCVSQDLEPLTILYY
             370       380       390       400       410       420 

           360       370     
pF1KB6 NGKEQIIYGKIPAMVVDRCGCS
        ::   :  ..  :.:  : ::
CCDS44 IGKTPKIE-QLSNMIVKSCKCS
              430       440  

>>CCDS9846.1 TGFB3 gene_id:7043|Hs108|chr14               (412 aa)
 initn: 429 init1: 113 opt: 297  Z-score: 358.1  bits: 75.1 E(32554): 1.3e-13
Smith-Waterman score: 448; 27.9% identity (52.5% similar) in 383 aa overlap (49-375:36-412)

       20        30        40        50        60        70        
pF1KB6 GPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQILSKLRLETAPN--ISKDV
                                     :..:.:::. :::::::: . :.  .   :
CCDS98 QRALVVLALLNFATVSLSLSTCTTLDFGHIKKKRVEAIRGQILSKLRLTSPPEPTVMTHV
          10        20        30        40        50        60     

         80        90       100       110          120       130   
pF1KB6 IRQLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHATT---ETIITMPTESDFLMQVDG
         :.:      :::....  .:...      ...:.:       .:   .: . :     
CCDS98 PYQVLALYNSTRELLEEMHGEREEGCTQENTESEYYAKEIHKFDMIQGLAEHNELAVCPK
          70        80        90       100       110       120     

           140        150         160       170           180      
pF1KB6 KPKCCFFKFS-SKIQYNK--VVKAQLWIYLRPVETPTTVF----VQILRLIKPMKD--GT
             :.:. :... :.  . .:.. . :: : .:..      ........: .     
CCDS98 GITSKVFRFNVSSVEKNRTNLFRAEFRV-LR-VPNPSSKRNEQRIELFQILRPDEHIAKQ
         130       140       150         160       170       180   

          190       200       210       220                   230  
pF1KB6 RYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKA------------LDE
       :: : ..:      ::. : :.::  ....:: . :::::.::.             . :
CCDS98 RYIGGKNLPTR---GTAEWLSFDVTDTVREWLLRRESNLGLEISIHCPCHTFQPNGDILE
           190          200       210       220       230       240

             240                       250            260          
pF1KB6 NGHD-LAVTFPG----------------PGEDGLNPFLEVKVT-----DTP----KRSRR
       : :. . . : :                  .:  :: : . .      :.:    .:..:
CCDS98 NIHEVMEIKFKGVDNEDDHGRGDLGRLKKQKDHHNPHLILMMIPPHRLDNPGQGGQRKKR
              250       260       270       280       290       300

        270       280       290        300       310       320     
pF1KB6 DFGLDCDEHSTESRCCRYPLTVDF-EAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTH
        .  .   .. :  ::  :: .:: . .:: :.  :: : ::.::: : ..      :. 
CCDS98 ALDTNYCFRNLEENCCVRPLYIDFRQDLGWKWVHEPKGYYANFCSGPCPYLRSADTTHST
              310       320       330       340       350       360

            330       340       350       360       370     
pF1KB6 ---LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS
          : .  ::..::.:::.:  . :...::. :.   .  ..  :::  : ::
CCDS98 VLGLYNTLNPEASASPCCVPQDLEPLTILYYVGRTPKVE-QLSNMVVKSCKCS
              370       380       390        400       410  

>>CCDS13099.1 BMP2 gene_id:650|Hs108|chr20                (396 aa)
 initn: 290 init1: 134 opt: 295  Z-score: 356.0  bits: 74.6 E(32554): 1.7e-13
Smith-Waterman score: 380; 26.5% identity (55.5% similar) in 366 aa overlap (41-374:36-395)

               20        30        40        50          60        
pF1KB6 YLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSR--IEAIKIQILSKLRLET
                                     : . : ... :   .  .....:: . :. 
CCDS13 RCLLALLLPQVLLGGAAGLVPELGRRKFAAASSGRPSSQPSDEVLSEFELRLLSMFGLKQ
          10        20        30        40        50        60     

       70        80        90       100        110       120       
pF1KB6 APNISKDVIRQLLPKAPPLRELIDQYDVQRDDSS-DGSLEDDDYHATTETIITMPTESDF
        :. :.:..   .:  : . .:  ... :  . . :  ::    .:.:   .      . 
CCDS13 RPTPSRDAV---VP--PYMLDLYRRHSGQPGSPAPDHRLERAASRANTVRSFHHEESLEE
          70             80        90       100       110       120

       130        140       150       160          170          180
pF1KB6 LMQVDGKP-KCCFFKFSSKIQYNKVVKAQLWIYLRPVETP---TTVF---VQILRLIKPM
       : ...::  .  ::..::    . ...:.: .. . ..     .. :   ..: ..::: 
CCDS13 LPETSGKTTRRFFFNLSSIPTEEFITSAELQVFREQMQDALGNNSSFHHRINIYEIIKPA
              130       140       150       160       170       180

              190        200       210       220         230       
pF1KB6 KDGTRYTGIRSLKLDM-NPGTGIWQSIDVKTVLQNWLKQPESNLG--IEIKALDE----N
         ....   : :   . : ... :.:.::  ... :  : ..: :  .:.  :.:    .
CCDS13 TANSKFPVTRLLDTRLVNQNASRWESFDVTPAVMRWTAQGHANHGFVVEVAHLEEKQGVS
              190       200       210       220       230       240

           240           250            260       270       280    
pF1KB6 GHDLAVTFPGPGEDG----LNPFL-----EVKVTDTPKRSRRDFGLDCDEHSTESRCCRY
        . . ..     ..     . :.:     . :     :: .:. .   ...  .: : :.
CCDS13 KRHVRISRSLHQDEHSWSQIRPLLVTFGHDGKGHPLHKREKRQ-AKHKQRKRLKSSCKRH
              250       260       270       280        290         

          290        300       310       320        330            
pF1KB6 PLTVDFEAFGW-DWIIAPKRYKANYCSGECEFVFLQKYPHT-HLVHQA--NPRGSAGP--
       :: :::   :: :::.::  :.: :: ::: : . ..   : : . :.  :  .:  :  
CCDS13 PLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKA
     300       310       320       330       340       350         

      340       350       360       370     
pF1KB6 CCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS
       ::.::..: :.:::.. .:...  .   :::. ::: 
CCDS13 CCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGCR
     360       370       380       390      




375 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 16:58:12 2016 done: Sat Nov  5 16:58:12 2016
 Total Scan time:  2.640 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com