GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:55:32

Sequence gi568815597f:205423168_205630706 : 207539 bp : 49.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    623    618    6                               1.05
 1.05 Term -   5163   5056  108  0  0  103   55    44 0.230   1.11
 1.04 Intr -   9518   9424   95  0  2   70  115    27 0.389   3.28
 1.03 Intr -  13370  13181  190  2  1   38   84    69 0.245   0.66
 1.02 Intr -  13753  13571  183  1  0   92   34   100 0.278   4.98
 1.01 Init -  17859  17764   96  0  0   58   46    95 0.489   2.61
 1.00 Prom -  22724  22685   40                              -6.66

 2.00 Prom +  26607  26646   40                              -6.56
 2.01 Init +  27818  27875   58  1  1   97   69    45 0.789   3.74
 2.02 Intr +  32474  32581  108  0  0   75  109    36 0.795   4.66
 2.03 Term +  33725  33837  113  0  2  127   47    86 0.867   7.12
 2.04 PlyA +  34051  34056    6                               1.05

 3.00 Prom +  36409  36448   40                              -5.46
 3.01 Init +  42091  42149   59  0  2   74  106    38 0.677   4.98
 3.02 Intr +  61861  62158  298  1  1  -85   21   580 0.145  30.88
 3.03 Intr +  68509  68590   82  0  1  113   95     9 0.485   3.31
 3.04 Intr +  70634  70773  140  0  2   93   75   130 0.558  12.38
 3.05 Term +  76232  76345  114  1  0   20   36   170 0.528   3.57
 3.06 PlyA +  79135  79140    6                               1.05

 4.00 Prom +  87447  87486   40                              -5.66
 4.01 Init +  97738  97882  145  0  1   71   56   106 0.848   5.98
 4.02 Intr +  99294  99478  185  1  2  104   57    -4 0.793  -2.39
 4.03 Intr +  99980 100130  151  1  1   90   42   232 0.875  18.54
 4.04 Intr + 100316 100458  143  0  2   40   94   142 0.755  10.07
 4.05 Intr + 101065 101190  126  0  0   81  105   136 0.900  15.48
 4.06 Intr + 101972 102028   57  1  0   78   94    58 0.956   4.48
 4.07 Intr + 102898 103012  115  0  1   70   54   224 0.999  17.22
 4.08 Intr + 103200 103294   95  1  2   73   85   180 0.586  15.88
 4.09 Intr + 103608 103670   63  2  0   70  100   125 0.532  10.81
 4.10 Intr + 104627 104750  124  1  1  117   73   299 0.986  31.46
 4.11 Intr + 104881 105001  121  2  1   59   89   111 0.885   7.85
 4.12 Intr + 105832 105929   98  1  2  141   69   133 0.995  16.35
 4.13 Intr + 106157 106262  106  0  1  118   68   156 0.996  15.87
 4.14 Intr + 106354 106396   43  1  1  119  105    40 0.988   7.04
 4.15 Intr + 107092 107182   91  0  1   83   79    90 0.907   7.17
 4.16 Intr + 107461 107538   78  2  0   93   91   127 0.914  13.02
 4.17 Intr + 110226 110379  154  1  1   40   72    70 0.232  -0.27
 4.18 Intr + 113568 113664   97  0  1   90   61    30 0.124   0.51
 4.19 Term + 123512 123688  177  1  0   98   35   145 0.977   7.89
 4.20 PlyA + 126219 126224    6                               1.05

 5.00 Prom + 138972 139011   40                              -2.96
 5.01 Init + 145903 146132  230  0  2   93   86   478 0.853  45.94
 5.02 Intr + 156584 156782  199  2  1  122  115   394 0.983  44.85
 5.03 Intr + 157494 157778  285  2  0  138   91   269 0.648  29.74
 5.04 Intr + 160788 160956  169  2  1   95   63   172 0.989  14.92
 5.05 Intr + 161709 161824  116  1  2  124  101   128 0.997  17.87
 5.06 Intr + 162867 163040  174  2  0  101   91   197 0.994  21.44
 5.07 Intr + 168973 169120  148  0  1   78  100   285 0.999  28.51
 5.08 Intr + 174613 174683   71  2  2   69   88    54 0.433   2.40
 5.09 Intr + 175964 176084  121  1  1  109  110     0 0.845   4.37
 5.10 Intr + 177127 177159   33  2  0  101   94    14 0.617   1.49
 5.11 Intr + 177239 177290   52  0  1   96   83    12 0.261  -0.53
 5.12 Term + 180088 180190  103  1  1   96   42    27 0.160  -3.35
 5.13 PlyA + 182817 182822    6                               1.05

 6.05 PlyA - 184467 184462    6                               1.05
 6.04 Term - 190175 190170    6  2  0  123   50     0 0.311  -2.43
 6.03 Intr - 197671 196943  729  1  0   80   33   413 0.448  26.63
 6.02 Intr - 200724 200509  216  0  0   91   62   182 0.984  14.60
 6.01 Intr - 203002 202819  184  0  1   22   -1   182 0.412   2.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:205423168_205630706|GENSCAN_predicted_peptide_1|223_aa
MPQFTFACFCGLHGFCKMKRKKEEVHRERETAEGTHYKGHTYQMCPDVAGTFGDRYLVHN
CKGGLSPEKKISGLLSSVGSLQAGPGSLVFLLKGESSGPQAIPGVVSAHCAGVIVASPPG
FASLNFHGIGTIDHEEETGTLTLHGGAQEVRTIHQEASTDFCPWLYVRTDRASNDPAGRY
DRKPLLSQHLKGSFSKITVMASLPCSKLFGNRIGKMLTTVEAG

>gi568815597f:205423168_205630706|GENSCAN_predicted_CDS_1|672_bp
atgccccagttcactttcgcctgcttctgtggtctccacggcttctgcaaaatgaagagg
aagaaggaggaagttcacagagagcgggagacggcggaaggcacgcattataaagggcac
acttatcagatgtgcccagatgtggctggaacttttggagacagatacttggttcacaac
tgcaaaggtgggctttcaccagagaagaaaatctctgggctgctgagttcagtgggctcc
ttgcaggctggtccaggaagtctggtgttcctcctgaagggtgaatcctctggaccccag
gccatccctggagtggtcagtgcccactgtgccggggttattgtggccagtccgcctggg
ttcgcttctctaaatttccatgggataggaactatagatcatgaagaagaaacaggaacc
ttgactcttcacggaggagcccaggaggtcagaaccatccaccaggaggcgtctacagac
ttctgcccatggctgtatgtacgcacggacagagctagcaatgaccctgctggcaggtat
gataggaagcctcttctgtcacagcacctcaagggctctttctcaaagataactgtcatg
gcatcactcccctgctccaagctttttggtaacaggattggcaaaatgttgacaactgtt
gaagcagggtga

>gi568815597f:205423168_205630706|GENSCAN_predicted_peptide_2|92_aa
MPTIPVSSGATTTFLQLAGAAKSFKRNKGNGGGEGASSLVDLGRRLTQPAAGQLSAPQPR
GRRARPTPPSAPPDGRGQPAFRSSASELQLRA

>gi568815597f:205423168_205630706|GENSCAN_predicted_CDS_2|279_bp
atgcccacgattcctgtctcctctggggccaccacaacctttctgcagcttgctggtgcg
gcaaaatcctttaaaaggaacaaaggcaatgggggcggggagggggcttcctctttggtc
gacctagggcggcggctgacgcagcccgccgccggtcagctttcagccccccagccccgg
ggccggcgtgcccggcccaccccgccctccgcgccccccgacggccgcggtcagccggca
ttccggagcagcgcgtcggagctgcaacttcgcgcctaa

>gi568815597f:205423168_205630706|GENSCAN_predicted_peptide_3|230_aa
MSQRKPGAEQLVSNIISEDGKKKEKKKEEEEEKEKEQEREEKKEKKKKEEEEKEKKKEEE
KEKEREKKEKKEKKEEEEEEEEEEEKTPATIPATLLTRRGILEKSLSLSELWFPHLDEGQ
APPHLGLLLLKHPKFTVPRASPRGRTVNSPACTIFSQALSFPIKIQRLELEPGVILAQAA
QAGRPENSEVGMQASGAFLKVFTKMFNWLLKGYLATAEISTCAWPMADIE

>gi568815597f:205423168_205630706|GENSCAN_predicted_CDS_3|693_bp
atgtcccagagaaaaccaggtgctgaacaacttgttagcaacattatctctgaggatggg
aagaagaaggagaagaagaaggaggaagaggaggagaaggagaaggagcaggagagggag
gagaagaaggagaagaagaagaaggaggaggaggagaaggagaagaagaaggaggaggag
aaggagaaggagagggagaagaaggagaagaaggagaagaaggaggaggaggaggaggag
gaggaggaggaggagaagacaccagctacgatcccagccaccctgctcacccgccgtggg
atcttggagaagtcacttagcctctctgagctttggtttcctcacctcgatgaagggcaa
gccccaccccacctgggcctgctgcttttgaagcaccccaaattcactgtccctagggct
tctccccgaggccgcactgtaaactcgcctgcttgcacgattttctctcaggctctgtcc
ttccctatcaagatccagcggctggagctggagcctggcgtcatcctggcccaagctgcc
caggcgggacgaccagagaactcagaggtggggatgcaggcctctggagcatttctaaaa
gtcttcaccaagatgttcaactggctcctcaagggctacctggctacagctgaaatcagc
acctgtgcttggcccatggcagatattgagtaa

>gi568815597f:205423168_205630706|GENSCAN_predicted_peptide_4|722_aa
MVAALWKLPVCKSPADSRPETLHRATEERLKMTDRKEFRDGESGKSKAAGEKVQLASSDA
LFPSSSFSPLASWGMPEQRPSGVSIRGEMRFGPNHVPRVLAKLTFSLRALDPAAQSLMIM
NKMKNFKRRFSLSVPRTETIEESLAEFTEQFNQLHNRRNENLQLGPLGRDPPQECSTFSP
TDSGEEPGQLSPGVQFQRRQNQRRFSMEDVSKRLSLPMDIRLPQEFLQKLQMESPDLPKP
LSRMSRRASLSDIGFGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA
PCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMSMHNVK
IFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVT
LWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEE
TWPGVTAFSEFRTYSFPCYLPQPLINHAPRLDTDGIHLLSSLLLYESKSRMSAEAALSHS
YFRSLGERVHQLEDTASIFSLKEIQLQKDPGYRGLAFQQPGSARIAADLEYTSCCCLDRL
PTFDLDTTHPRNTSYTAPKVLRVLLLSSSVSRTSHHLPTKSIIGHQGPAPALAVEARWLA
SLLMGCVPSTSKFLPGCPNLEIMLKMEPDVQDFQLGFILLVNLLGYKDKDESNDSQIRKY
LY

>gi568815597f:205423168_205630706|GENSCAN_predicted_CDS_4|2169_bp
atggtggctgccctctggaagcttcctgtctgcaagagtcctgcagacagcaggcctgag
acattgcacagagccacggaggagcggctgaagatgactgacaggaaggagtttagggat
ggggagtcaggaaagtccaaggctgctggagagaaggtgcagctggccagctctgatgca
ctcttcccttcctcctctttttcccctcttgcctcctggggcatgccagagcagagacct
tcaggtgtcagtatcagaggtgaaatgaggtttggacccaatcatgtcccaagggtgttg
gccaagctgacattcagtttacgggccttggacccggctgcccagtccctcatgatcatg
aacaagatgaagaactttaagcgccgtttctccctgtcagtgccccgcactgagaccatt
gaagaatccttggctgaattcacggagcaattcaaccagctccacaaccggcggaatgag
aacttgcagctcggtcctcttggcagagaccccccgcaggagtgcagcaccttctcccca
acagacagcggggaggagccggggcagctctcccctggcgtgcagttccagcggcggcag
aaccagcgccgcttctccatggaggacgtcagcaagaggctctctctgcccatggatatc
cgcctgccccaggaattcctacagaagctacagatggagagcccagatctgcccaagccg
ctcagccgcatgtcccgccgggcctccctgtcagacattggctttgggaaactggaaaca
tacgtgaaactggacaaactgggagagggcacctatgccacagtcttcaaagggcgcagc
aaactgacggagaaccttgtggccctgaaagagatccggctggagcacgaggagggagcg
ccctgcactgccatccgagaggtgtctctgctgaagaacctgaagcacgccaatattgtg
accctgcatgacctcatccacacagatcggtccctcaccctggtgtttgagtacctggac
agtgacctgaagcagtatctggaccactgtgggaacctcatgagcatgcacaacgtcaag
attttcatgttccagctgctccggggcctcgcctactgtcaccaccgcaagatcctgcac
cgggacctgaagccccagaacctgctcatcaacgagaggggggagctgaagctggccgac
tttggactggccagggccaagtcagtgcccacaaagacttactccaatgaggtggtgacc
ctgtggtacaggccccccgatgtgctgctgggatccacagagtactccacccccattgat
atgtggggcgtgggctgcatccactacgagatggccacagggaggcccctcttcccgggc
tccacagtcaaggaggagctgcacctcatctttcgcctcctcgggacccccacagaagag
acgtggcccggcgtgaccgccttctctgagttccgcacctacagcttcccctgctacctc
ccgcagccgctcatcaaccacgcgcccaggttggatacggatggcatccacctcctgagc
agcctgctcctgtatgaatccaagagtcgcatgtcagcagaggctgccctgagtcactcc
tacttccggtctctgggagagcgtgtgcaccagcttgaagacactgcctccatcttctcc
ctgaaggagatccagctccagaaggacccaggctaccgaggcttggccttccagcagcca
ggctctgcaagaattgctgcagacctcgaatacacctcctgctgctgcctagaccgcctc
cccacctttgatctggacacaacccacccccgcaacacatcatacacagctcccaaagtg
ctcagagtcctgctgttgtccagttcggtgtccagaacctcccaccatctgccaactaaa
agcatcattgggcaccagggccctgctcccgccctagctgtggaggcccggtggctggca
tcattgctgatgggctgtgtgccctccacatccaagtttctccctggctgccctaatctg
gagataatgctgaaaatggagccagatgtccaagacttccagctgggatttatcctcttg
gtaaatctgctagggtataaggataaggatgaaagcaacgacagccagattaggaagtat
ctctattag

>gi568815597f:205423168_205630706|GENSCAN_predicted_peptide_5|566_aa
MGCDGRVSGLLRRNLQPTLTYWSVFFSFGLCIAFLGPTLLDLRCQTHSSLPQISWVFFSQ
QLCLLLGSALGGVFKRTLAQSLWALFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMG
CIDTVANMQLVRMYQKDSAVFLQVLHFFVGFGALLSPLIADPFLSEANCLPANSTANTTS
RGHLFHVSRVLGQHHVDAKPWSNQTFPGLTPKDGAGTRVSYAFWIMALINVSVPGVGQLP
VPMAVLMLLSKERLLTCCPQRRPLLLSADELALETQPPEKEDASSLPPKFQSHLGHEDLF
SCCQRKNLRGAPYSFFAIHITGALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLP
SLFWGFITLGRLLSIPISSRMKPATMVFINVVGVVVTFLVLLIFSYNVVFLFVGTASLGL
FLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQGSYSFLVCGVI
FGCLAFTFYILLLFFHRMHPGLPSEPQNGRETNSLVPTQDRSIGMENSECYQRNLDISES
CGITLFPDFPLLLVYGNLTHQAHRIH

>gi568815597f:205423168_205630706|GENSCAN_predicted_CDS_5|1701_bp
atgggctgcgacggccgcgtgtcggggctgctccgccgcaacctgcagcccacgctcacc
tactggagcgtcttcttcagcttcggcctgtgcatcgccttcctggggcccacgctgctg
gacctgcgctgtcagacgcacagctcgctgccccagatctcctgggtcttcttctcgcag
cagctctgcctcctgctgggcagcgccctcgggggcgtcttcaaaaggaccctggcccag
tcactatgggccctgttcacctcctctctggccatctccctggtgtttgccgtcatcccc
ttctgccgcgacgtgaaggtgctggcctcagtcatggcgctggcgggcttggccatgggc
tgcatcgacaccgtggccaacatgcagctggtaaggatgtaccagaaggactcggccgtc
ttcctccaggtgctccatttcttcgtgggctttggtgctctgctgagcccccttattgct
gaccctttcctgtctgaggccaactgcttgcctgccaatagcacggccaacaccacctcc
cgaggccacctgttccatgtctccagggtgctgggccagcaccacgtagatgccaagcct
tggtccaaccagacgttcccagggctgactccaaaggacggggcagggacccgagtgtcc
tatgccttctggatcatggccctcatcaatgtgagtgtccctggggtgggccagcttcca
gtgcccatggctgtgctgatgctgctgtccaaggagcggctgctgacctgctgtccccag
aggaggcccctgcttctgtctgctgatgagcttgccttggagacacagcctcctgagaag
gaagatgcctcctcactgcccccaaagtttcagtcacacctagggcatgaggacctgttc
agctgctgccaaaggaagaacctcagaggagccccttattccttctttgccatccacatc
acgggcgccctggtactgttcatgacggatgggttgacgggtgcctattccgccttcgtg
tacagctatgctgtggagaagcccctgtctgtgggacacaaggtggctggctacctcccc
agcctcttctggggcttcatcacactgggccggctcctctccattcccatatcctcaaga
atgaagccggccaccatggttttcatcaacgtggttggcgtggtggtgacgttcctggtg
ctgcttattttctcctacaacgtcgtcttcctgttcgtggggacggcaagcctgggcctg
tttctcagcagcaccttccccagcatgctggcctacacggaggactcgctgcagtacaaa
ggctgtgcaaccacagtgctggtgacaggggcaggagttggcgagatggtgctgcagatg
ctggttggttcgatattccaggctcagggcagctatagtttcctggtctgtggcgtgatc
tttggttgtctggcttttaccttctatatcttgctcctgtttttccacaggatgcaccct
ggactcccatcagagccacagaatggcagagaaacaaacagcctggttcctacccaagac
agatcaattggaatggaaaactctgagtgctaccagaggaatttggacatttcagaatcc
tgtggaatcaccctgttcccagattttcctctgctacttgtatatggaaatctaacccat
caggcacatcggattcactaa

>gi568815597f:205423168_205630706|GENSCAN_predicted_peptide_6|378_aa
XSGVAASQTVDTLVTVGNVEKEVFMVFLVELTHCGTGGQNDIVDKEKQGILSSEMNSLLD
QELIAMDSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMN
YDKLSRALRYYYVKNIIKKVNGQKFVYKFVSYPEILNMDPMTVGRIEGDCESLNFSEVSS
SSKDVENGGKDKPPQPGAKTSSRNDYIHSGLYSSFTLNSLNSSNVKLFKLIKTENPAEKL
AEKKSPQEPTPSVIKFVTTPSKKPPVEPVAATISIGPSISPSSEETIQALETLVSPKLPS
LEAPTSASNVMTAFATTPPISSIPPLQEPPRTPSPPLSSHPDIDTDIDSVASQPMELPEN
LSLEPKDQDSVLLEKDKK

>gi568815597f:205423168_205630706|GENSCAN_predicted_CDS_6|1137_bp
nnctcaggggtagcagcatcacagactgtagacactttggtcactgtaggcaacgtagag
aaagaagtcttcatggtgttcctggtagagctgacccattgtggcactggtgggcagaat
gacattgttgacaaagaaaaacaaggcatcctcagctcggagatgaattcgcttctggat
caagaactcattgctatggacagtgctatcaccctgtggcagttccttcttcagctcctg
cagaagcctcagaacaagcacatgatctgttggacctctaatgatgggcagtttaagctt
ttgcaggcagaagaggtggctcgtctctgggggattcgcaagaacaagcctaacatgaat
tatgacaaactcagccgagccctcagatactattatgtaaagaatatcatcaaaaaagtg
aatggtcagaagtttgtgtacaagtttgtctcttatccagagattttgaacatggatcca
atgacagtgggcaggattgagggtgactgtgaaagtttaaacttcagtgaagtcagcagc
agttccaaagatgtggagaatggagggaaagataaaccacctcagcctggtgccaagacc
tctagccgcaatgactacatacactctggcttatattcttcatttactctcaactctttg
aactcctccaatgtaaagcttttcaaattgataaagactgagaatccagccgagaaactg
gcagagaaaaaatctcctcaggagcccacaccatctgtcatcaaatttgtcacgacacct
tccaaaaagccaccggttgaacctgttgctgccaccatttcaattggcccaagtatttct
ccatcttcagaagaaactatccaagctttggagacattggtttccccaaaactgccttcc
ctggaagccccaacctctgcctctaacgtaatgactgcttttgccaccacaccacccatt
tcgtccataccccctttgcaggaacctcccagaacaccttcaccaccactgagttctcac
ccagacatcgacacagacattgattcagtggcttctcagccaatggaacttccagagaat
ttgtcactggagcctaaagaccaggattcagtcttgctagaaaaggacaaaaaatga