Result of FASTA (ccds) for pF1KB6523
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6523, 364 aa
  1>>>pF1KB6523 364 - 364 aa - 364 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.1304+/-0.000762; mu= 10.4591+/- 0.046
 mean_var=181.3877+/-37.193, 0's: 0 Z-trim(115.1): 83  B-trim: 0 in 0/54
 Lambda= 0.095229
 statistics sampled from 15611 (15702) to 15611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.482), width:  16
 Scan time:  3.230

The best scores are:                                      opt bits E(32554)
CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12        ( 364) 2515 357.2 1.3e-98
CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12       ( 325) 2269 323.4 1.8e-88
CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12       ( 178) 1214 178.1   5e-45
CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17       ( 411)  467 75.9 6.9e-14
CCDS77722.1 STAC gene_id:6769|Hs108|chr3           ( 341)  431 70.9 1.9e-12
CCDS2662.1 STAC gene_id:6769|Hs108|chr3            ( 402)  431 70.9 2.1e-12


>>CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12             (364 aa)
 initn: 2515 init1: 2515 opt: 2515  Z-score: 1884.1  bits: 357.2 E(32554): 1.3e-98
Smith-Waterman score: 2515; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)

               10        20        30        40        50        60
pF1KB6 MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 YYIYEEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 YYIYEEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 KNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFET
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 LRTGVIMANKERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 LRTGVIMANKERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 HKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 HKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 IIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 IIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDF
              310       320       330       340       350       360

           
pF1KB6 LEEI
       ::::
CCDS89 LEEI
           

>>CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12            (325 aa)
 initn: 2269 init1: 2269 opt: 2269  Z-score: 1702.0  bits: 323.4 E(32554): 1.8e-88
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 325 aa overlap (40-364:1-325)

      10        20        30        40        50        60         
pF1KB6 PKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPIYYIYEEEEE
                                     ::::::::::::::::::::::::::::::
CCDS66                               MELPPEPQANGEAVGAGGGPIYYIYEEEEE
                                             10        20        30

      70        80        90       100       110       120         
pF1KB6 EEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHE
               40        50        60        70        80        90

     130       140       150       160       170       180         
pF1KB6 HCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTGVIMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 HCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTGVIMAN
              100       110       120       130       140       150

     190       200       210       220       230       240         
pF1KB6 KERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQS
              160       170       180       190       200       210

     250       260       270       280       290       300         
pF1KB6 HYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 HYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGER
              220       230       240       250       260       270

     310       320       330       340       350       360    
pF1KB6 VHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
              280       290       300       310       320     

>>CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12            (178 aa)
 initn: 1214 init1: 1214 opt: 1214  Z-score: 921.9  bits: 178.1 E(32554): 5e-45
Smith-Waterman score: 1214; 100.0% identity (100.0% similar) in 178 aa overlap (187-364:1-178)

        160       170       180       190       200       210      
pF1KB6 YSNQQYACVKDLSAANRNDPVFETLRTGVIMANKERKKGQADKKNPVAAMMEEEPESARP
                                     ::::::::::::::::::::::::::::::
CCDS66                               MANKERKKGQADKKNPVAAMMEEEPESARP
                                             10        20        30

        220       230       240       250       260       270      
pF1KB6 EEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITV
               40        50        60        70        80        90

        280       290       300       310       320       330      
pF1KB6 IDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 IDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQ
              100       110       120       130       140       150

        340       350       360    
pF1KB6 KGDEAGGYVKVYTGRKVGLFPTDFLEEI
       ::::::::::::::::::::::::::::
CCDS66 KGDEAGGYVKVYTGRKVGLFPTDFLEEI
              160       170        

>>CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17            (411 aa)
 initn: 734 init1: 340 opt: 467  Z-score: 362.8  bits: 75.9 E(32554): 6.9e-14
Smith-Waterman score: 732; 38.8% identity (64.4% similar) in 317 aa overlap (77-364:95-411)

         50        60        70        80           90       100   
pF1KB6 QANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVNDKP---HKFKDHFFKKPKFC
                                     : : :  :.  ::   :.:..: ::. . :
CCDS11 EVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPC
           70        80        90       100       110       120    

           110       120       130       140       150       160   
pF1KB6 DVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQY-
       ..: ..:: :.: ::::: ::...:  :.  .  :.: ::   .:.: .::::  ..   
CCDS11 ELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPP
          130       140       150       160       170       180    

            170            180       190       200            210  
pF1KB6 ACVKDLSA-----ANRNDPVFETLRTGVIMANKERKKGQADKKNPVAAMME-----EEPE
       .:. .  .     ... :::.:::: :. .:  .:.. .. ...:. .. :     :. :
CCDS11 VCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGE
          190       200       210       220       230       240    

              220       230       240                  250         
pF1KB6 -SARP-EEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQS-----------HYFVALYRFK
        : :  :::  ....:     ::.. :  ..:.:: :             . .::::.: 
CCDS11 GSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFL
          250       260       270       280       290       300    

     260       270       280       290       300       310         
pF1KB6 ALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVG
         :..:: . ::..: ..:::::.::.::::..::::: ::. ::: :: : :  . : :
CCDS11 PQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSG
          310       320       330       340       350       360    

     320       330         340       350       360    
pF1KB6 NREIGQITLKKDQIVVQKG--DEAGGYVKVYTGRKVGLFPTDFLEEI
       :.: : ..::..:: :  :   .: :...: .:.: :: :.: : ::
CCDS11 NKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI
          370       380       390       400       410 

>>CCDS77722.1 STAC gene_id:6769|Hs108|chr3                (341 aa)
 initn: 581 init1: 417 opt: 431  Z-score: 337.1  bits: 70.9 E(32554): 1.9e-12
Smith-Waterman score: 490; 28.9% identity (52.8% similar) in 388 aa overlap (4-364:17-341)

                            10        20        30        40       
pF1KB6              MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQ
                       ::.. . .:  :: : .:  ..:..: :. :  :: ..     .
CCDS77 MIPPSSPREDGVDGLPKEAVGAEQPPSPAST-SSQESKLQKLKRSLSFKTKSLR----SK
               10        20        30         40        50         

        50        60        70        80                  90       
pF1KB6 ANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVND----------KPHKFKDHFF
       .  .     ..  . .  .   :      : : : .:..           : : :....:
CCDS77 SADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIF
          60        70        80        90       100       110     

       100       110       120       130       140       150       
pF1KB6 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLY
       ::: ::::: .:::                                              
CCDS77 KKPTFCDVCNHMIV----------------------------------------------
         120                                                       

       160       170       180       190           200       210   
pF1KB6 SNQQYACVKDLSAANRNDPVFETLRTGVIMANKERK----KGQADKKNPVAAMMEEEPES
            ::      .:. :::.:::: :. .:.. .:    .:. . .   .. . : :: 
CCDS77 -----AC------GNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEE
          130             140       150       160       170        

           220                    230       240       250       260
pF1KB6 ARPEEGK-------------PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKA
       :    :              :..:. .    :.. . . . ..  .:.. : ::::.:  
CCDS77 ANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VALYKFVP
      180       190       200       210       220        230       

              270       280       290       300       310       320
pF1KB6 LEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGN
        :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:.. : .:.:.: 
CCDS77 QENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGC
       240       250       260       270       280       290       

              330       340       350       360    
pF1KB6 REIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
       .: ::::::..:: :.. .:  :...: .:.: ::.: : ::.:
CCDS77 KEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
       300       310       320       330       340 

>>CCDS2662.1 STAC gene_id:6769|Hs108|chr3                 (402 aa)
 initn: 773 init1: 417 opt: 431  Z-score: 336.2  bits: 70.9 E(32554): 2.1e-12
Smith-Waterman score: 809; 35.5% identity (63.3% similar) in 392 aa overlap (4-364:17-402)

                            10        20        30        40       
pF1KB6              MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQ
                       ::.. . .:  :: : .:  ..:..: :. :  :: ..     .
CCDS26 MIPPSSPREDGVDGLPKEAVGAEQPPSPAST-SSQESKLQKLKRSLSFKTKSLR----SK
               10        20        30         40        50         

        50        60        70        80                  90       
pF1KB6 ANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVND----------KPHKFKDHFF
       .  .     ..  . .  .   :      : : : .:..           : : :....:
CCDS26 SADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIF
          60        70        80        90       100       110     

       100       110        120       130       140       150      
pF1KB6 KKPKFCDVCARMIV-LNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPL
       ::: ::::: .:::  : : ::::: :: .::..: . .  :::.::.: ::.: :::::
CCDS26 KKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPL
         120       130       140       150       160       170     

        160          170       180       190           200         
pF1KB6 YSNQQYACVKD---LSAANRNDPVFETLRTGVIMANKERK----KGQADKKNPVAAMMEE
         ..:..:.:.   .. .:. :::.:::: :. .:.. .:    .:. . .   .. . :
CCDS26 LIHEQFGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVE
         180       190       200       210       220       230     

     210       220                    230       240       250      
pF1KB6 EPESARPEEGK-------------PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALY
        :: :    :              :..:. .    :.. . . . ..  .:.. : ::::
CCDS26 VPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VALY
         240       250       260       270       280       290     

        260       270       280       290       300       310      
pF1KB6 RFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRS
       .:   :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:.. : .:.
CCDS26 KFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRT
          300       310       320       330       340       350    

        320       330       340       350       360    
pF1KB6 FVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
       :.: .: ::::::..:: :.. .:  :...: .:.: ::.: : ::.:
CCDS26 FIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
          360       370       380       390       400  




364 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 16:53:54 2016 done: Sat Nov  5 16:53:55 2016
 Total Scan time:  3.230 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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