Result of FASTA (omim) for pF1KB0415
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0415, 468 aa
  1>>>pF1KB0415 468 - 468 aa - 468 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8114+/-0.000326; mu= 11.9924+/- 0.020
 mean_var=137.4255+/-27.817, 0's: 0 Z-trim(119.8): 100  B-trim: 713 in 1/60
 Lambda= 0.109406
 statistics sampled from 34132 (34281) to 34132 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.402), width:  16
 Scan time:  9.880

The best scores are:                                      opt bits E(85289)
NP_000556 (OMIM: 147880,614689,614752) interleukin ( 468) 3235 522.0 1.4e-147
XP_016856689 (OMIM: 147880,614689,614752) PREDICTE ( 501) 2471 401.4 2.9e-111
NP_852004 (OMIM: 147880,614689,614752) interleukin ( 365) 2467 400.7 3.5e-111
NP_001193795 (OMIM: 147880,614689,614752) interleu ( 352) 2230 363.3 6.2e-100
XP_006711362 (OMIM: 147880,614689,614752) PREDICTE ( 381) 2218 361.4 2.5e-99
XP_006711361 (OMIM: 147880,614689,614752) PREDICTE ( 484) 2219 361.6 2.6e-99
XP_016856688 (OMIM: 147880,614689,614752) PREDICTE ( 517) 2218 361.5 3.1e-99
XP_005245197 (OMIM: 147880,614689,614752) PREDICTE ( 338) 1866 305.8 1.2e-82
XP_005245196 (OMIM: 147880,614689,614752) PREDICTE ( 360) 1866 305.8 1.3e-82
XP_016856690 (OMIM: 147880,614689,614752) PREDICTE ( 371) 1866 305.8 1.3e-82
NP_001136256 (OMIM: 600939,614188) interleukin-11  ( 422)  506 91.2 5.9e-18
XP_016869752 (OMIM: 118946) PREDICTED: ciliary neu ( 372)  372 70.0 1.2e-11
NP_001193940 (OMIM: 118946) ciliary neurotrophic f ( 372)  372 70.0 1.2e-11
NP_001833 (OMIM: 118946) ciliary neurotrophic fact ( 372)  372 70.0 1.2e-11
NP_671693 (OMIM: 118946) ciliary neurotrophic fact ( 372)  372 70.0 1.2e-11
XP_016869754 (OMIM: 118946) PREDICTED: ciliary neu ( 372)  372 70.0 1.2e-11
XP_016869753 (OMIM: 118946) PREDICTED: ciliary neu ( 372)  372 70.0 1.2e-11
XP_016869750 (OMIM: 118946) PREDICTED: ciliary neu ( 439)  372 70.1 1.4e-11
XP_016869749 (OMIM: 118946) PREDICTED: ciliary neu ( 439)  372 70.1 1.4e-11
XP_016869751 (OMIM: 118946) PREDICTED: ciliary neu ( 439)  372 70.1 1.4e-11
XP_011526726 (OMIM: 272430,604237) PREDICTED: cyto ( 404)  287 56.6 1.4e-07
XP_011526725 (OMIM: 272430,604237) PREDICTED: cyto ( 419)  287 56.6 1.5e-07
NP_004741 (OMIM: 272430,604237) cytokine receptor- ( 422)  287 56.6 1.5e-07
XP_011526724 (OMIM: 272430,604237) PREDICTED: cyto ( 423)  287 56.6 1.5e-07
NP_786943 (OMIM: 600694) interleukin-6 receptor su ( 329)  218 45.7 0.00024
NP_001177910 (OMIM: 600694) interleukin-6 receptor ( 857)  222 46.6 0.00031
NP_002175 (OMIM: 600694) interleukin-6 receptor su ( 918)  222 46.7 0.00033
XP_011525921 (OMIM: 605816) PREDICTED: interleukin ( 229)  212 44.6 0.00035
NP_005746 (OMIM: 605816) interleukin-27 subunit be ( 229)  212 44.6 0.00035
NP_001191247 (OMIM: 176761,615554,615555) prolacti ( 268)  209 44.2 0.00054
NP_001191246 (OMIM: 176761,615554,615555) prolacti ( 288)  209 44.2 0.00057
XP_016865135 (OMIM: 176761,615554,615555) PREDICTE ( 309)  209 44.2  0.0006
NP_001191244 (OMIM: 176761,615554,615555) prolacti ( 349)  209 44.3 0.00066
NP_001191245 (OMIM: 176761,615554,615555) prolacti ( 376)  209 44.3  0.0007
NP_000940 (OMIM: 176761,615554,615555) prolactin r ( 622)  209 44.5   0.001
XP_011512370 (OMIM: 176761,615554,615555) PREDICTE ( 622)  209 44.5   0.001
XP_006714547 (OMIM: 176761,615554,615555) PREDICTE ( 622)  209 44.5   0.001
XP_011512371 (OMIM: 176761,615554,615555) PREDICTE ( 622)  209 44.5   0.001
XP_016856693 (OMIM: 601642) PREDICTED: interleukin ( 498)  202 43.3  0.0018
NP_001245145 (OMIM: 601642) interleukin-12 recepto ( 635)  202 43.4  0.0022
NP_001306162 (OMIM: 601642) interleukin-12 recepto ( 659)  202 43.4  0.0023
XP_016856692 (OMIM: 601642) PREDICTED: interleukin ( 659)  202 43.4  0.0023
NP_001245143 (OMIM: 601642) interleukin-12 recepto ( 659)  202 43.4  0.0023
XP_016856691 (OMIM: 601642) PREDICTED: interleukin ( 700)  202 43.4  0.0024
XP_006710680 (OMIM: 601642) PREDICTED: interleukin ( 776)  202 43.5  0.0026
NP_001245144 (OMIM: 601642) interleukin-12 recepto ( 776)  202 43.5  0.0026
XP_011539686 (OMIM: 601642) PREDICTED: interleukin ( 809)  202 43.5  0.0027
XP_005270884 (OMIM: 601642) PREDICTED: interleukin ( 862)  202 43.5  0.0028
XP_005270882 (OMIM: 601642) PREDICTED: interleukin ( 862)  202 43.5  0.0028
XP_011539685 (OMIM: 601642) PREDICTED: interleukin ( 862)  202 43.5  0.0028


>>NP_000556 (OMIM: 147880,614689,614752) interleukin-6 r  (468 aa)
 initn: 3235 init1: 3235 opt: 3235  Z-score: 2770.7  bits: 522.0 E(85289): 1.4e-147
Smith-Waterman score: 3235; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 SVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRP
              370       380       390       400       410       420

              430       440       450       460        
pF1KB0 TPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
              430       440       450       460        

>>XP_016856689 (OMIM: 147880,614689,614752) PREDICTED: i  (501 aa)
 initn: 2471 init1: 2471 opt: 2471  Z-score: 2118.6  bits: 401.4 E(85289): 2.9e-111
Smith-Waterman score: 3155; 93.2% identity (93.4% similar) in 501 aa overlap (1-468:1-501)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLP-----
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
XP_016 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPGTAIK
              310       320       330       340       350       360

                                     360       370       380       
pF1KB0 ----------------------------VQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLR
                                   .:::::::::::::::::::::::::::::::
XP_016 EVPKAFRLLYPLCALWEQVECHQKSHSEMQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLR
              370       380       390       400       410       420

       390       400       410       420       430       440       
pF1KB0 FKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNR
              430       440       450       460       470       480

       450       460        
pF1KB0 PDARDPRSPYDISNTDYFFPR
       :::::::::::::::::::::
XP_016 PDARDPRSPYDISNTDYFFPR
              490       500 

>>NP_852004 (OMIM: 147880,614689,614752) interleukin-6 r  (365 aa)
 initn: 2467 init1: 2467 opt: 2467  Z-score: 2117.0  bits: 400.7 E(85289): 3.5e-111
Smith-Waterman score: 2467; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
NP_852 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPGSRRR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 SVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRP
                                                                   
NP_852 GSCGL                                                       
                                                                   

>>NP_001193795 (OMIM: 147880,614689,614752) interleukin-  (352 aa)
 initn: 2230 init1: 2230 opt: 2230  Z-score: 1915.1  bits: 363.3 E(85289): 6.2e-100
Smith-Waterman score: 2230; 99.1% identity (99.4% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
       ::::::::::::::::.  ::                                       
NP_001 GEWSEWSPEAMGTPWTDRLSPRCPGWSTAVQSQLTATSASWVQAILPPQPPK        
              310       320       330       340       350          

>>XP_006711362 (OMIM: 147880,614689,614752) PREDICTED: i  (381 aa)
 initn: 2453 init1: 2217 opt: 2218  Z-score: 1904.4  bits: 361.4 E(85289): 2.5e-99
Smith-Waterman score: 2425; 95.7% identity (95.7% similar) in 371 aa overlap (1-355:1-371)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310                       320       330       340    
pF1KB0 GEWSEWSPEAMGTPWT----------------ESRSPPAENEVSTPMQALTTNKDDDNIL
       ::::::::::::::::                ::::::::::::::::::::::::::::
XP_006 GEWSEWSPEAMGTPWTGFSPQTIPGGIWDPAGESRSPPAENEVSTPMQALTTNKDDDNIL
              310       320       330       340       350       360

          350       360       370       380       390       400    
pF1KB0 FRDSANATSLPVQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSM
       :::::::::::                                                 
XP_006 FRDSANATSLPGSRRRGSCGL                                       
              370       380                                        

>>XP_006711361 (OMIM: 147880,614689,614752) PREDICTED: i  (484 aa)
 initn: 3221 init1: 2217 opt: 2219  Z-score: 1903.8  bits: 361.6 E(85289): 2.6e-99
Smith-Waterman score: 3193; 96.7% identity (96.7% similar) in 484 aa overlap (1-468:1-484)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310                       320       330       340    
pF1KB0 GEWSEWSPEAMGTPWT----------------ESRSPPAENEVSTPMQALTTNKDDDNIL
       ::::::::::::::::                ::::::::::::::::::::::::::::
XP_006 GEWSEWSPEAMGTPWTGFSPQTIPGGIWDPAGESRSPPAENEVSTPMQALTTNKDDDNIL
              310       320       330       340       350       360

          350       360       370       380       390       400    
pF1KB0 FRDSANATSLPVQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FRDSANATSLPVQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSM
              370       380       390       400       410       420

          410       420       430       440       450       460    
pF1KB0 HPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDY
              430       440       450       460       470       480

           
pF1KB0 FFPR
       ::::
XP_006 FFPR
           

>>XP_016856688 (OMIM: 147880,614689,614752) PREDICTED: i  (517 aa)
 initn: 2967 init1: 2217 opt: 2218  Z-score: 1902.6  bits: 361.5 E(85289): 3.1e-99
Smith-Waterman score: 2986; 90.0% identity (90.2% similar) in 500 aa overlap (1-451:1-500)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
              250       260       270       280       290       300

              310                       320       330       340    
pF1KB0 GEWSEWSPEAMGTPWT----------------ESRSPPAENEVSTPMQALTTNKDDDNIL
       ::::::::::::::::                ::::::::::::::::::::::::::::
XP_016 GEWSEWSPEAMGTPWTGFSPQTIPGGIWDPAGESRSPPAENEVSTPMQALTTNKDDDNIL
              310       320       330       340       350       360

          350                                        360       370 
pF1KB0 FRDSANATSLP---------------------------------VQDSSSVPLPTFLVAG
       :::::::::::                                 .:::::::::::::::
XP_016 FRDSANATSLPGTAIKEVPKAFRLLYPLCALWEQVECHQKSHSEMQDSSSVPLPTFLVAG
              370       380       390       400       410       420

             380       390       400       410       420       430 
pF1KB0 GSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPP
              430       440       450       460       470       480

             440       450       460        
pF1KB0 VSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
       ::::::::::::::::::::                 
XP_016 VSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
              490       500       510       

>>XP_005245197 (OMIM: 147880,614689,614752) PREDICTED: i  (338 aa)
 initn: 1886 init1: 1863 opt: 1866  Z-score: 1604.8  bits: 305.8 E(85289): 1.2e-82
Smith-Waterman score: 1866; 97.1% identity (98.2% similar) in 280 aa overlap (1-277:1-280)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260          270       280       290       
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWM---VKDLQHHCVIHDAWSGLRHVVQLRAQEE
       :::::::::::::::::::::::::::::   : .:. .:                    
XP_005 PHSWNSSFYRLRFELRYRAERSKTFTTWMNPGVLQLRTRCPPPCRHLLLIKTMIIFSSEI
              250       260       270       280       290       300

       300       310       320       330       340       350       
pF1KB0 FGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQ
                                                                   
XP_005 LQMRQASQCKILLQYHCPHSWLLEGAWPSERSSALPLF                      
              310       320       330                              

>>XP_005245196 (OMIM: 147880,614689,614752) PREDICTED: i  (360 aa)
 initn: 1863 init1: 1863 opt: 1866  Z-score: 1604.4  bits: 305.8 E(85289): 1.3e-82
Smith-Waterman score: 1866; 97.1% identity (98.2% similar) in 280 aa overlap (1-277:1-280)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260          270       280       290       
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWM---VKDLQHHCVIHDAWSGLRHVVQLRAQEE
       :::::::::::::::::::::::::::::   : .:. .:                    
XP_005 PHSWNSSFYRLRFELRYRAERSKTFTTWMNPGVLQLRTRCPPPCRHLLLIKTMIIFSSEI
              250       260       270       280       290       300

       300       310       320       330       340       350       
pF1KB0 FGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQ
                                                                   
XP_005 LQMRQASQVQEDVEAAGSEGRQDKHASAVLFGAAGPGEASTHPSACSSHLPTGVPQQPGV
              310       320       330       340       350       360

>>XP_016856690 (OMIM: 147880,614689,614752) PREDICTED: i  (371 aa)
 initn: 1886 init1: 1863 opt: 1866  Z-score: 1604.3  bits: 305.8 E(85289): 1.3e-82
Smith-Waterman score: 1866; 97.1% identity (98.2% similar) in 280 aa overlap (1-277:1-280)

               10        20        30        40        50        60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
              190       200       210       220       230       240

              250       260          270       280       290       
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWM---VKDLQHHCVIHDAWSGLRHVVQLRAQEE
       :::::::::::::::::::::::::::::   : .:. .:                    
XP_016 PHSWNSSFYRLRFELRYRAERSKTFTTWMNPGVLQLRTRCPPPCRHLLLIKTMIIFSSEI
              250       260       270       280       290       300

       300       310       320       330       340       350       
pF1KB0 FGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQ
                                                                   
XP_016 LQMRQASQELPSRRSPKPSVCCTLFVPCGSRWNVTRKATLKCKILLQYHCPHSWLLEGAW
              310       320       330       340       350       360




468 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 16:48:02 2016 done: Sat Nov  5 16:48:03 2016
 Total Scan time:  9.880 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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