GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:05:21

Sequence gi568815592f:87494351_87767120 : 272770 bp : 40.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6273   6317   45  2  0   92  111    21 0.688   5.65
 1.02 Intr +   6808   6960  153  0  0  113   83    36 0.955   4.95
 1.03 Intr +  12032  12098   67  1  1   64   99    45 0.917   0.76
 1.04 Intr +  14070  14246  177  1  0   91   84    54 0.702   4.27
 1.05 Intr +  14691  14825  135  1  0   16   44   136 0.516   1.62
 1.06 Term +  17049  17176  128  1  2  105   34    34 0.495  -2.84
 1.07 PlyA +  17264  17269    6                               1.05

 2.08 PlyA -  17977  17972    6                               1.05
 2.07 Term -  20149  20063   87  1  0  103   28    68 0.564  -1.02
 2.06 Intr -  20670  20607   64  2  1  101   71    41 0.527   1.50
 2.05 Intr -  24389  24280  110  2  2   86   94     4 0.272  -1.04
 2.04 Intr -  27236  27114  123  2  0   39  103    67 0.681   3.16
 2.03 Intr -  35298  35182  117  0  0   59   32    89 0.415   0.14
 2.02 Intr -  36592  36434  159  1  0   87   67   234 0.986  20.46
 2.01 Init -  47651  47568   84  2  0   48  100    74 0.954   5.47
 2.00 Prom -  48092  48053   40                              -3.35

 3.08 PlyA -  48650  48645    6                               1.05
 3.07 Term -  58842  58683  160  2  1  124   39    63 0.928   1.43
 3.06 Intr -  61155  61058   98  0  2   76   94    88 0.904   6.09
 3.05 Intr -  68435  68352   84  2  0   94  116     0 0.826   2.50
 3.04 Intr -  69882  69780  103  2  1   62  102   100 0.301   8.06
 3.03 Intr -  80997  80929   69  2  0  106   93    20 0.199   1.68
 3.02 Intr -  95938  95748  191  1  2   99   88   118 0.142  10.36
 3.01 Init - 120078 119827  252  0  0   74   76   162 0.170  10.99
 3.00 Prom - 132141 132102   40                              -4.85

 4.00 Prom + 160264 160303   40                              -3.75
 4.01 Init + 163583 163668   86  1  2   56  107    53 0.485   4.34
 4.02 Intr + 168653 168794  142  2  1   32  116    60 0.874   2.63
 4.03 Intr + 170393 170509  117  1  0   16   92   103 0.896   3.24
 4.04 Term + 171404 171526  123  1  0   55   38   123 0.878   1.40
 4.05 PlyA + 173074 173079    6                               1.05

 5.08 PlyA - 173610 173605    6                               1.05
 5.07 Term - 181142 180964  179  0  2   56   42   101 0.871  -0.83
 5.06 Intr - 181581 181510   72  1  0   37   87    97 0.875   2.96
 5.05 Intr - 183617 183468  150  0  0   59   80   152 0.914  10.71
 5.04 Intr - 187413 187270  144  1  0   51   90    94 0.950   5.23
 5.03 Intr - 204005 203840  166  2  1   80   72    43 0.319   0.51
 5.02 Intr - 206796 206597  200  1  2   35   23   143 0.539   0.65
 5.01 Init - 207334 207100  235  1  1  107   75   286 0.859  25.55
 5.00 Prom - 210061 210022   40                              -7.65

 6.03 PlyA - 211549 211544    6                               1.05
 6.02 Term - 213853 213801   53  2  2   97   38    47 0.734  -2.79
 6.01 Init - 215934 215817  118  0  1   91   70   180 0.912  16.91
 6.00 Prom - 222569 222530   40                              -7.25

 7.00 Prom + 227249 227288   40                              -4.45
 7.01 Sngl + 231338 231571  234  1  0   71   37   200 0.577   8.05
 7.02 PlyA + 235921 235926    6                               1.05

 8.03 PlyA - 237338 237333    6                               1.05
 8.02 Term - 252071 251962  110  0  2   30   49   224 0.890  10.39
 8.01 Init - 259162 259009  154  1  1   64   34    87 0.355   1.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_1|234_aa
MAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWVSVFMLCAGVTLVQWKPA
QATKVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIIVTLA
GVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLS
TIASVMLFGLQITLTFALGTLLVCVSIYLYGLPRQDTTSIQQGETASKERVIGV

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_1|705_bp
atggctttcctagctcttagcaatctggatgcagcagtgtaccaggtgacctaccagttg
aagattccgtgtactgctttatgcactgttttaatgttaaaccggacactcagcaaatta
cagtgggtttcagtttttatgctgtgtgctggagttacgcttgtacagtggaaaccagcc
caagctacaaaagtggtggtggaacaaaatccattattagggtttggcgctatagctatt
gctgtattgtgctcaggatttgcaggagtatattttgaaaaagttttaaagagttcagat
acttctctttgggtgagaaacattcaaatgtatctatcagggattattgtgacattagct
ggcgtctacttgtcagatggagctgaaattaaagaaaaaggatttttctatggttacaca
tattatgtctggtttgtcatctttcttgcaagtgttggtggcctctacacttctgttgtg
gttaagtacacagacaacatcatgaaaggcttttctgcagcagcggccattgtcctttcc
accattgcttcagtaatgctgtttggattacagataacactcacctttgccctgggtact
cttcttgtatgtgtttccatatatctctatggattacccagacaagacactacatccatc
caacaaggagaaacagcttcaaaggagagagttattggtgtgtga

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_2|247_aa
MVGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQ
ALSLWQKFRDLSIEEYIRVYKRLGVYFDEYSGESFYREKSQEVLKLLESKGLLLKTMYDQ
VRPIITRICLVTLGLWPLCFRDLAAAIDRMDKYNFDTMIYVDFKGLLLSDYKFSWDRVFQ
SRGDTGVFLQYTHARLHSHLAAVAHKTLQIKDSPPEVAGARLHLFKAVRSVLANGMKLLG
ITPVCRM

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_2|744_bp
atggtaggtcttctgggaactggcttccagctgtttggctatgaggaaaaactgcagtcc
aatcctctacagcatctctttgaagtttatgtacaagttaataaagaagcagcagatgat
aaaagtgtagcaaaagcagcacaggagttcttccaacgattggaactgggcgatgtgcaa
gcactttcactgtggcaaaaatttcgggacttgagcattgaagagtacattcgggtttac
aagcgtctgggagtatattttgatgaatattcaggagaatcattttatcgtgaaaaatct
caagaggtcttaaagttgctggagagtaaaggactcctactgaaaacaatgtatgatcag
gtaagaccaattattacccggatctgcttagtaactcttggtttatggccactttgtttc
agagatcttgcagctgctatagatcgaatggacaagtataattttgatacaatgatatat
gtggacttcaaaggtttactcttatctgactacaagttcagctgggatcgtgttttccag
agtcgcggggacacaggagtcttcctacagtacacacacgcccgcctccacagtcatctt
gcagctgtggcacacaaaacactacaaataaaagatagtcctcctgaagtggctggggcc
agacttcatcttttcaaagctgtccgttctgtcctagccaatggaatgaaacttcttgga
ataacacctgtatgtaggatgtaa

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_3|318_aa
MEKISPGHVRGLHGSPSHHKPGDLGGKSDFTGWAQSPRAVCSLGNWCCVLATPAVAEKGQ
HKVRATASESASPKPWQLPHRVEPPGKGCLRNLGFIPSSKGNEAAVEPQCASATTYLRHR
GRSHGLTDSAYSRCTRDFPRALAAAGQRNHLPNKLLACKSFSQALLLKKPREVADFQLSV
DSLLEKDNDHSRPDIQVQAKRLAEKLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVI
EDGSKYGLKSELFSGLPQKKIVVEFRVARPLYKGTQGSKIVKSSSLETGTASFLSLSADE
SKSQDHPRFKGRKIEYIS

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_3|957_bp
atggagaaaatatctccagggcatgtcagaggtcttcatggcagcccctcccatcacaag
cctggagacctaggaggcaaaagcgatttcacgggctgggcccagagtccccgtgctgtg
tgcagcttaggaaattggtgctgtgtcctagccactccagctgtggctgaaaagggccaa
cacaaagttcgggccacggcttcagagagtgcaagccccaagccctggcagcttccacat
cgtgttgagcctccagggaagggatgcctacgtaacctcggcttcatcccttcttcaaag
gggaatgaggcagcggtagagccacagtgcgcatcggccaccacataccttagacatcga
ggacgtagccatggtcttactgactctgcgtattccagatgcactcgggatttcccgcgc
gccctcgcggctgcagggcagaggaaccatctcccaaataaactacttgcctgcaagtct
ttttctcaggccctgcttttgaagaagccaagagaagtagctgattttcagctttctgtg
gattctttattggaaaaagacaatgaccattcaagaccagatattcaagttcaagccaag
agactagcagagaagctaagatgtgatacagtggtgagtgaaatcagtactggtcaaagg
actgtaaatttcaaaataaacagagagctcttaacaaagacagtgctacaacaagtaatt
gaagatggctcaaaatatggattaaaaagtgaacttttctctggacttccccagaagaag
attgtggttgaattcagggtagcaagacctctttacaaaggtactcaaggctctaagata
gtgaaatcatctagtcttgaaacaggcacagcatcatttttgtcactttctgctgatgaa
agcaagtcacaagatcaccccagattcaagggaagaaaaatagagtacatctcttaa

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_4|155_aa
MKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAP
RIALHTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATV
VTAAEKMDANSATSEEMNEIIQYPFKTISTMSNYT

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_4|468_bp
atgaaggagttaagaagaagtaagaagcaaaccaaatttgaagtactcagagaaaatgtt
gtgaacttcattgactgtctagtgagagaataccttctgcctcctgagacacagcctctc
catgaggtggtgtacttcagtgctgcccatgcccttcgtgagcatttaaatgctgctccg
cgaattgccctccatactgcactcaacaatccttactattatctcaagaatgaagcactg
aaaagcgaagaaggctgcattccgaatatcgccccagacatctgcatagcatacaaactg
cacctagagtgtagcaggctcatcaacctcgtggactggtcagaggcttttgcaacagtt
gtgacagctgctgaaaaaatggatgcaaattctgcaacctcagaagaaatgaatgaaatt
atccagtatccttttaaaaccatttctacaatgtccaactacacataa

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_5|381_aa
MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQK
YLRMEPSPFGDVSSRLTTVAGAPAEMIREDDIIRKFRRKGHISPQSGCVLAVIDWLQLLT
LGLGGLRRGYSPSFSSDTADFSIVGVTMAEFNSCHTQYIAPKTPYLLSGVYRKSLLTLMW
GVSSEVYNTPGYGKGKVISGKQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAF
LLSGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREEYEEILNTKLAEQ
YDAFVKFTHDQIMRRYGEQPASCYFKLSSVATTLRQQQLVLEISLMSVPPGCGPLLPVLI
PVASFCCIITIWLLILMFEKD

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_5|1146_bp
atggcgtgcggagccactctgaaaaggactctggatttcgacccgctgttgagcccggcg
tccccgaagcgcaggcgatgtgcgccattgtcggcgcccacctcggccgctgcctccccg
ttgtcggcggccgcggccaccgccgcctccttctccgctgcggccgcctcgccgcagaag
tatctccgaatggagccatcccccttcggcgacgtctcctcccgcctcaccacagtcgct
ggagccccagcggaaatgatcagagaggacgatattattcgtaaatttaggcgaaagggt
cacatttcaccccaatctggatgtgtgcttgccgtaatcgattggttgcagctattaact
ctgggactgggtggtttgaggcgaggctacagcccctccttcagttcagacacggctgat
tttagtatagtgggggtgacgatggcagagtttaatagttgtcacacacagtatattgcc
ccgaaaactccatatttgctctctggtgtttacagaaaaagtttgcttaccctcatgtgg
ggtgtcagcagtgaggtttataatacccctgggtatggaaaaggaaaagtgatcagtgga
aaacaaattctgtacaacataaaacaagagtataaacgaatgcagaagagaagacattta
gaaacgagtttccaacagacagatccgtgttgtacttctgatgcacagccacatgcattt
ctcctcagtggaccagcttcaccagggacttcatctgcagcatcctcaccattaaaaaaa
gaacagcccttatttactctacggcaggttgggatgatctgtgaacgtttgttgaaagaa
cgtgaagagaaagttcgagaagaatatgaagaaatattgaacacaaaacttgcagaacaa
tatgatgcgtttgtgaagtttacgcatgatcaaataatgcgacgatatggagaacagcct
gctagctgttatttcaagctttcgtcagtggcaaccactcttaggcagcagcaactggtt
ttggaaatttccctgatgtcagtaccacctggatgtggacctttgctacctgtattaata
ccagtggcctcattttgctgtatcattacaatttggcttcttatattaatgtttgaaaag
gattaa

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_6|56_aa
MEPQDKRHKREREPDTDSDTNSESGLDLSKTTEQTAAVEVYSSSWFGLENKIPKHI

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_6|171_bp
atggaaccacaggacaaaaggcacaagagggaacgagagcctgacacagacagtgacacc
aattctgagtcaggcttggacttaagcaagacaacggaacagacagctgcagtagaagta
tattcttccagttggtttggactggaaaataagatccccaagcacatttga

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_7|77_aa
MQNLFSGEAMELASGTEMAQHQCWYPQQRVSAATVPTPAAFSSITVQQYDLDITSCQVAQ
NMILWPFQTVYVLSNTL

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_7|234_bp
atgcagaatctgttttctggtgaagctatggagcttgccagtggcacagaaatggcccag
caccagtgttggtatccccagcagagagttagtgcagccacagtgccaacgccagcggcg
ttctcttctataacagtccagcagtatgatttggatataacttcctgccaagtagcccag
aacatgattctctggcccttccagacagtctatgtgctatctaataccctttaa

>gi568815592f:87494351_87767120|GENSCAN_predicted_peptide_8|87_aa
MRKTQHPLCDIPAKDTQPELNHEETSDKTELRGIKQNNWSIFVKSFKAIKPNNYVEYAQE
KEKEEKKEENEEKDEEKEEEEEEEKRY

>gi568815592f:87494351_87767120|GENSCAN_predicted_CDS_8|264_bp
atgaggaaaacacagcatcccctctgtgatattcctgccaaagatacacaacctgaactt
aatcatgaggaaacatctgacaaaaccgaacttaggggcattaaacaaaacaactggtcc
atatttgtcaaaagttttaaggccataaagccaaacaattatgttgaatatgctcaggag
aaggagaaggaggagaagaaggaggagaatgaggagaaggatgaggagaaggaggaggag
gaggaggaggagaaaagatattga