Result of FASTA (omim) for pF1KB5922
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5922, 533 aa
  1>>>pF1KB5922 533 - 533 aa - 533 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 16.2083+/-0.000433; mu= -33.0294+/- 0.027
 mean_var=608.2232+/-124.996, 0's: 0 Z-trim(125.0): 46  B-trim: 0 in 0/61
 Lambda= 0.052005
 statistics sampled from 47748 (47828) to 47748 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.561), width:  16
 Scan time: 12.760

The best scores are:                                      opt bits E(85289)
NP_005556 (OMIM: 601603) lymphocyte cytosolic prot ( 533) 3729 294.4 5.8e-79
NP_443196 (OMIM: 611434) cytokine-dependent hemato ( 428)  468 49.7 2.1e-05
XP_011512077 (OMIM: 611434) PREDICTED: cytokine-de ( 443)  468 49.7 2.2e-05
XP_011538030 (OMIM: 604515,613502) PREDICTED: B-ce ( 456)  439 47.5  0.0001
NP_037446 (OMIM: 604515,613502) B-cell linker prot ( 456)  439 47.5  0.0001
XP_016863173 (OMIM: 611434) PREDICTED: cytokine-de ( 402)  365 41.9  0.0043
XP_016863174 (OMIM: 611434) PREDICTED: cytokine-de ( 399)  358 41.4  0.0062


>>NP_005556 (OMIM: 601603) lymphocyte cytosolic protein   (533 aa)
 initn: 3729 init1: 3729 opt: 3729  Z-score: 1538.7  bits: 294.4 E(85289): 5.8e-79
Smith-Waterman score: 3729; 100.0% identity (100.0% similar) in 533 aa overlap (1-533:1-533)

               10        20        30        40        50        60
pF1KB5 MALRNVPFRSEVLGWDPDSLADYFKKLNYKDCEKAVKKYHIDGARFLNLTENDIQKFPKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MALRNVPFRSEVLGWDPDSLADYFKKLNYKDCEKAVKKYHIDGARFLNLTENDIQKFPKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 RVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESPNDDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESPNDDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DGEDDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDRPPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DGEDDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDRPPSG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 PPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHM
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 PGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENSLNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENSLNE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 EWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKES
              430       440       450       460       470       480

              490       500       510       520       530   
pF1KB5 QVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
              490       500       510       520       530   

>>NP_443196 (OMIM: 611434) cytokine-dependent hematopoie  (428 aa)
 initn: 474 init1: 358 opt: 468  Z-score: 217.8  bits: 49.7 E(85289): 2.1e-05
Smith-Waterman score: 486; 29.9% identity (54.4% similar) in 421 aa overlap (150-528:14-417)

     120       130       140       150       160        170        
pF1KB5 QDGEDDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPA-KPFPNSNSMYIDRPP
                                     ::: . .::  ::  . .:  ::       
NP_443                  MNRQGNRKTTKEGSNDLK-FQNFSLPKNRSWPRINSA------
                                10         20        30            

      180         190       200       210       220       230      
pF1KB5 SGKTPQ--QPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSID
       .:.  .  .: .  .: .::.     :.. .    :.   ::  .:       :::  : 
NP_443 TGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQS----IKILPARPIK
         40        50        60        70        80            90  

               240       250        260               270          
pF1KB5 RST-------KPPLDRSLAPFD-REPFTLGKKPPFS--------DKPSIPAGRSL---GE
       .:        :  .:  : :.: :  ...:. : ..        :::     ::    :.
NP_443 ESEYADTHYFKVAMDTPL-PLDTRTSISIGQ-PTWNTQTRLERVDKPISKDVRSQNIKGD
            100       110        120        130       140       150

       280       290          300           310              320   
pF1KB5 HLPKIQKPPLPPTTER---HERSSPLP----GKKPPVPKHGWGPDRRE-------NDEDD
          . .: ::::        .. .:::    ...::. ..   :. ..        : ..
NP_443 ASVRKNKIPLPPPRPLITLPKKYQPLPPEPESSRPPLSQRHTFPEVQRMPSQISLRDLSE
              160       170       180       190       200       210

            330       340       350       360       370       380  
pF1KB5 VHQ-RPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFS
       : . . .:.    : :.. . ...:.  :.    ::   .  : .: .  . ... :   
NP_443 VLEAEKVPHNQRKPESTHLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSP
              220       230       240       250         260        

            390       400        410         420       430         
pF1KB5 QGPSNRPPIRAEGRNFPLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKI
       :    .::     ..  ::      ::: :  .....  ..:::..  .:  .: :. : 
NP_443 Q--RCQPPASCSPHENILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKE
        270       280       290       300       310       320      

     440       450       460       470       480       490         
pF1KB5 NQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVS
       :.::.::::: : :.  .:::: :.:..::::..::. ...: . ::::::: : : :: 
NP_443 NKDGSFLVRDCSTKSKEEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEKFDSVE
        330       340       350       360       370       380      

     500       510       520         530         
pF1KB5 DIIDYFRKMPLLLIDGKNRGS--RYQCTLTHAAGYP      
       :::......:..:::::.. .  : :: ::.           
NP_443 DIIEHYKNFPIILIDGKDKTGVHRKQCHLTQPLPLTRHLLPL
        390       400       410       420        

>>XP_011512077 (OMIM: 611434) PREDICTED: cytokine-depend  (443 aa)
 initn: 474 init1: 358 opt: 468  Z-score: 217.6  bits: 49.7 E(85289): 2.2e-05
Smith-Waterman score: 487; 28.6% identity (54.4% similar) in 465 aa overlap (87-528:11-432)

         60        70        80        90       100       110      
pF1KB5 FPKLRVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESP
                                     ::::  ..  ...  . : .... ...  :
XP_011                     MAELKIPLTRQVPRTMNRQGNRKTTKEGSNDLKFQNFSLP
                                   10        20        30        40

           120       130             140             150        160
pF1KB5 ND---DQDGEDDGDYESPN------EEEEAPVED------DADYEPPPSNDEEALQN-SI
       ..    . .   :.:.  :      :.. : : :      : ::. :    ::. :. .:
XP_011 KNRSWPRINSATGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKI
               50        60        70        80        90       100

              170       180       190       200       210       220
pF1KB5 LPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPS
       :::.:. .:.  : :     :. .. :.:       :    .    .:    ::  :. .
XP_011 LPARPIKESE--YADTH-YFKVAMDTPLP-------LDTRTSISIGQPTWNTQTRLERVD
              110          120              130       140       150

                230       240       250       260       270        
pF1KB5 R--SRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEH
       .  :.. .. .. . .  :..: ::     :  :  .:: ::     .:  :        
XP_011 KPISKDVRSQNIKGDASVRKNKIPL-----PPPRPLITLPKKY----QPLPPE-------
              160       170            180           190           

      280       290       300       310       320       330        
pF1KB5 LPKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMS
        :. ..:::   ..::          : : .     . :. .:  .. . .:.    : :
XP_011 -PESSRPPL---SQRHTF--------PEVQRMPSQISLRDLSEV-LEAEKVPHNQRKPES
           200                  210       220        230       240 

      340       350       360       370       380       390        
pF1KB5 SNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNF
       .. . ...:.  :.    ::   .  : .: .  . ... :   :    .::     .. 
XP_011 THLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSPQ--RCQPPASCSPHEN
             250       260       270         280         290       

      400        410         420       430       440       450     
pF1KB5 PLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTT
        ::      ::: :  .....  ..:::..  .:  .: :. : :.::.::::: : :. 
XP_011 ILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLVRDCSTKSK
       300       310       320       330       340       350       

         460       470       480       490       500       510     
pF1KB5 TNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDG
        .:::: :.:..::::..::. ...: . ::::::: : : :: :::......:..::::
XP_011 EEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEKFDSVEDIIEHYKNFPIILIDG
       360       370       380       390       400       410       

         520         530         
pF1KB5 KNRGS--RYQCTLTHAAGYP      
       :.. .  : :: ::.           
XP_011 KDKTGVHRKQCHLTQPLPLTRHLLPL
       420       430       440   

>>XP_011538030 (OMIM: 604515,613502) PREDICTED: B-cell l  (456 aa)
 initn: 459 init1: 262 opt: 439  Z-score: 205.7  bits: 47.5 E(85289): 0.0001
Smith-Waterman score: 529; 27.7% identity (53.6% similar) in 470 aa overlap (65-517:18-441)

           40        50        60        70              80        
pF1KB5 AVKKYHIDGARFLNLTENDIQKFPKLRVPILSKLSQEINKNEE------RRSIFTRKPQV
                                     :.:. ..:..::       ..      :.:
XP_011              MDSSPCALLARRTSLGQLQKMVHDIKNNEGGIMNKIKKLKVKAPPSV
                            10        20        30        40       

       90       100       110       120       130       140        
pF1KB5 PRFPEETESHEEDNGGWSSFEEDDYESPNDDQDGEDDGDYESPNEEEEAPVEDDADYEPP
       ::    .::  ...  ::.  ..:::.:.. .:.:    :  : ::.     ::. ::::
XP_011 PRRDYASESPADEEEQWSDDFDSDYENPDEHSDSEM---YVMPAEENA----DDS-YEPP
        50        60        70        80           90              

      150       160       170              180        190       200
pF1KB5 PSNDEEALQNSILPAKPFPNSNSMYIDR-------PPSGKT-PQQPPVPPQRPMAALPPP
       : ..:      . :: ::  . . :::        :: .:: :..:  : ..   .   :
XP_011 PVEQET---RPVHPALPF--ARGEYIDNRSSQRHSPPFSKTLPSKPSWPSEKARLTSTLP
     100          110         120       130       140       150    

              210       220       230       240       250       260
pF1KB5 PAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKK
            ..:  ::. .    .  ...    .:. . :..   : . :  : .. :..  . 
XP_011 ALTALQKPQVPPKPK----GLLEDEADYVVPVEDNDENYIHPTESSSPPPEKAPMVNRST
          160           170       180       190       200       210

              270       280       290       300         310        
pF1KB5 PPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPLP--GKKPPVPKHGWGPDRRE
        : :. :. : : . :..    .    ::..      ::::  :::: .: .      ..
XP_011 KPNSSTPASPPGTASGRNSGAWETKSPPPAAP-----SPLPRAGKKPTTPLKTTPVASQQ
              220       230       240            250       260     

      320       330       340       350       360       370        
pF1KB5 NDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLP
       :  .  ...:.:       .     :   . . ..:.        :  ..... :.    
XP_011 NASSVCEEKPIP-------AERHRGSSHRQEAVQSPV--------FPPAQKQIHQKPIPL
         270              280       290               300       310

      380       390       400       410        420       430       
pF1KB5 PYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENS-LNEEWYVSYITRPEAEAALR
       : :..: .  : .  .:     :::.     . .:.: . : . ::..   :  :: ::.
XP_011 PRFTEGGN--PTV--DG-----PLPSFSSNSTISEQEAGVLCKPWYAGACDRKSAEEALH
                320              330       340       350       360 

       440       450       460       470       480       490       
pF1KB5 KINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLS
       . :.::.::.: :: . . .::.:.:... .:::: .:. . .. : ::    :.: : :
XP_011 RSNKDGSFLIRKSSGHDSKQPYTLVVFFNKRVYNIPVRFIEATKQYALGRKKNGEEYFGS
             370       380       390       400       410       420 

       500       510       520       530   
pF1KB5 VSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
       :..::   .. ::.:::..:                
XP_011 VAEIIRNHQHSPLVLIDSQNNTKDSTRLKYAVKVS 
             430       440       450       

>>NP_037446 (OMIM: 604515,613502) B-cell linker protein   (456 aa)
 initn: 459 init1: 262 opt: 439  Z-score: 205.7  bits: 47.5 E(85289): 0.0001
Smith-Waterman score: 536; 27.7% identity (53.2% similar) in 487 aa overlap (54-517:1-441)

            30        40        50        60        70             
pF1KB5 FKKLNYKDCEKAVKKYHIDGARFLNLTENDIQKFPKLRVPILSKLSQ------EINKNEE
                                     ..:. :. ::  .:: :      .:..:: 
NP_037                               MDKLNKITVPASQKLRQLQKMVHDIKNNEG
                                             10        20        30

              80        90       100       110       120       130 
pF1KB5 ------RRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESPNDDQDGEDDGDYESP
             ..      :.:::    .::  ...  ::.  ..:::.:.. .:.:    :  :
NP_037 GIMNKIKKLKVKAPPSVPRRDYASESPADEEEQWSDDFDSDYENPDEHSDSEM---YVMP
               40        50        60        70        80          

             140       150       160       170              180    
pF1KB5 NEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDR-------PPSGKT-P
        ::.     ::. ::::: ..:      . :: ::  . . :::        :: .:: :
NP_037 AEENA----DDS-YEPPPVEQET---RPVHPALPF--ARGEYIDNRSSQRHSPPFSKTLP
        90            100          110         120       130       

           190       200       210       220       230       240   
pF1KB5 QQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTKPPL
       ..:  : ..   .   :     ..:  ::. .    .  ...    .:. . :..   : 
NP_037 SKPSWPSEKARLTSTLPALTALQKPQVPPKPK----GLLEDEADYVVPVEDNDENYIHPT
       140       150       160           170       180       190   

           250       260       270       280       290       300   
pF1KB5 DRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPLP--
       . :  : .. :..  .  : :. :. : : . :..    .    ::..      ::::  
NP_037 ESSSPPPEKAPMVNRSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAP-----SPLPRA
           200       210       220       230       240             

             310       320       330       340       350       360 
pF1KB5 GKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHMP
       :::: .: .      ..:  .  ...:.:       .     :   . . ..:.      
NP_037 GKKPTTPLKTTPVASQQNASSVCEEKPIP-------AERHRGSSHRQEAVQSPV------
      250       260       270              280       290           

             370       380       390       400       410        420
pF1KB5 GAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENS-LNE
         :  ..... :.    : :..: .  : .  .:     :::.     . .:.: . : .
NP_037 --FPPAQKQIHQKPIPLPRFTEGGN--PTV--DG-----PLPSFSSNSTISEQEAGVLCK
           300       310         320              330       340    

              430       440       450       460       470       480
pF1KB5 EWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKES
        ::..   :  :: ::.. :.::.::.: :: . . .::.:.:... .:::: .:. . .
NP_037 PWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVVFFNKRVYNIPVRFIEAT
          350       360       370       380       390       400    

              490       500       510       520       530   
pF1KB5 QVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
       . : ::    :.: : ::..::   .. ::.:::..:                
NP_037 KQYALGRKKNGEEYFGSVAEIIRNHQHSPLVLIDSQNNTKDSTRLKYAVKVS 
          410       420       430       440       450       

>>XP_016863173 (OMIM: 611434) PREDICTED: cytokine-depend  (402 aa)
 initn: 389 init1: 273 opt: 365  Z-score: 176.5  bits: 41.9 E(85289): 0.0043
Smith-Waterman score: 384; 27.0% identity (52.4% similar) in 433 aa overlap (87-498:11-400)

         60        70        80        90       100       110      
pF1KB5 FPKLRVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESP
                                     ::::  ..  ...  . : .... ...  :
XP_016                     MAELKIPLTRQVPRTMNRQGNRKTTKEGSNDLKFQNFSLP
                                   10        20        30        40

           120       130             140             150        160
pF1KB5 ND---DQDGEDDGDYESPN------EEEEAPVED------DADYEPPPSNDEEALQN-SI
       ..    . .   :.:.  :      :.. : : :      : ::. :    ::. :. .:
XP_016 KNRSWPRINSATGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKI
               50        60        70        80        90       100

              170       180       190       200       210       220
pF1KB5 LPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPS
       :::.:. .:.  : :     :. .. :.:       :    .    .:    ::  :. .
XP_016 LPARPIKESE--YADTHYF-KVAMDTPLP-------LDTRTSISIGQPTWNTQTRLERVD
              110          120              130       140       150

                230       240       250       260       270        
pF1KB5 R--SRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEH
       .  :.. .. .. . .  :..: ::     :  :  .:: ::     .:  :        
XP_016 KPISKDVRSQNIKGDASVRKNKIPL-----PPPRPLITLPKKY----QPLPPE-------
              160       170            180           190           

      280       290       300       310       320       330        
pF1KB5 LPKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMS
        :. ..:::   ..::          : : .     . :. .:  .. . .:.    : :
XP_016 -PESSRPPL---SQRHTF--------PEVQRMPSQISLRDLSEV-LEAEKVPHNQRKPES
           200                  210       220        230       240 

      340       350       360       370       380       390        
pF1KB5 SNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNF
       .. . ...:.  :.    ::   .  : .: .  . ... :   :    .::     .. 
XP_016 THLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSPQ--RCQPPASCSPHEN
             250       260       270         280         290       

      400        410         420       430       440       450     
pF1KB5 PLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTT
        ::      ::: :  .....  ..:::..  .:  .: :. : :.::.::::: : :. 
XP_016 ILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLVRDCSTKSK
       300       310       320       330       340       350       

         460       470       480       490       500       510     
pF1KB5 TNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDG
        .:::: :.:..::::..::. ...: . ::::::: :. . :                 
XP_016 EEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDENVIPVRS               
       360       370       380       390       400                 

         520       530   
pF1KB5 KNRGSRYQCTLTHAAGYP

>>XP_016863174 (OMIM: 611434) PREDICTED: cytokine-depend  (399 aa)
 initn: 382 init1: 266 opt: 358  Z-score: 173.7  bits: 41.4 E(85289): 0.0062
Smith-Waterman score: 377; 27.1% identity (52.3% similar) in 428 aa overlap (87-493:11-395)

         60        70        80        90       100       110      
pF1KB5 FPKLRVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESP
                                     ::::  ..  ...  . : .... ...  :
XP_016                     MAELKIPLTRQVPRTMNRQGNRKTTKEGSNDLKFQNFSLP
                                   10        20        30        40

           120       130             140             150        160
pF1KB5 ND---DQDGEDDGDYESPN------EEEEAPVED------DADYEPPPSNDEEALQN-SI
       ..    . .   :.:.  :      :.. : : :      : ::. :    ::. :. .:
XP_016 KNRSWPRINSATGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKI
               50        60        70        80        90       100

              170       180       190       200       210       220
pF1KB5 LPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPS
       :::.:. .:.  : :     :. .. :.:       :    .    .:    ::  :. .
XP_016 LPARPIKESE--YADTH-YFKVAMDTPLP-------LDTRTSISIGQPTWNTQTRLERVD
              110          120              130       140       150

                230       240       250       260       270        
pF1KB5 R--SRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEH
       .  :.. .. .. . .  :..: ::     :  :  .:: ::     .:  :        
XP_016 KPISKDVRSQNIKGDASVRKNKIPL-----PPPRPLITLPKKY----QPLPPE-------
              160       170            180           190           

      280       290       300       310       320       330        
pF1KB5 LPKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMS
        :. ..:::   ..::          : : .     . :. .:  .. . .:.    : :
XP_016 -PESSRPPL---SQRHTF--------PEVQRMPSQISLRDLSEV-LEAEKVPHNQRKPES
           200                  210       220        230       240 

      340       350       360       370       380       390        
pF1KB5 SNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNF
       .. . ...:.  :.    ::   .  : .: .  . ... :   :    .::     .. 
XP_016 THLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSPQ--RCQPPASCSPHEN
             250       260       270         280         290       

      400        410         420       430       440       450     
pF1KB5 PLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTT
        ::      ::: :  .....  ..:::..  .:  .: :. : :.::.::::: : :. 
XP_016 ILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLVRDCSTKSK
       300       310       320       330       340       350       

         460       470       480       490       500       510     
pF1KB5 TNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDG
        .:::: :.:..::::..::. ...: . ::::::: :                      
XP_016 EEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEVGIT                  
       360       370       380       390                           

         520       530   
pF1KB5 KNRGSRYQCTLTHAAGYP




533 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 15:34:44 2016 done: Sat Nov  5 15:34:46 2016
 Total Scan time: 12.760 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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