Result of FASTA (omim) for pF1KB5901
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5901, 500 aa
  1>>>pF1KB5901 500 - 500 aa - 500 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0743+/-0.000292; mu= 14.9886+/- 0.019
 mean_var=80.4732+/-15.953, 0's: 0 Z-trim(118.4): 18  B-trim: 0 in 0/53
 Lambda= 0.142971
 statistics sampled from 31297 (31315) to 31297 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.367), width:  16
 Scan time: 10.220

The best scores are:                                      opt bits E(85289)
XP_016863661 (OMIM: 147183,614814) PREDICTED: reco ( 500) 3389 708.4 1.2e-203
NP_005340 (OMIM: 147183,614814) recombining bindin ( 500) 3389 708.4 1.2e-203
NP_056958 (OMIM: 147183,614814) recombining bindin ( 487) 3248 679.3 6.9e-195
NP_976028 (OMIM: 147183,614814) recombining bindin ( 485) 3240 677.6 2.1e-194
XP_011512142 (OMIM: 147183,614814) PREDICTED: reco ( 486) 3240 677.6 2.1e-194
XP_016863663 (OMIM: 147183,614814) PREDICTED: reco ( 486) 3240 677.6 2.1e-194
XP_016863664 (OMIM: 147183,614814) PREDICTED: reco ( 486) 3240 677.6 2.1e-194
NP_976029 (OMIM: 147183,614814) recombining bindin ( 486) 3240 677.6 2.1e-194
XP_005248218 (OMIM: 147183,614814) PREDICTED: reco ( 486) 3240 677.6 2.1e-194
XP_016863662 (OMIM: 147183,614814) PREDICTED: reco ( 486) 3240 677.6 2.1e-194
XP_016863660 (OMIM: 147183,614814) PREDICTED: reco ( 501) 3240 677.6 2.2e-194
XP_016863659 (OMIM: 147183,614814) PREDICTED: reco ( 506) 3240 677.6 2.2e-194
NP_001268378 (OMIM: 616104) recombining binding pr ( 516) 1634 346.4 1.2e-94
NP_001268377 (OMIM: 616104) recombining binding pr ( 471) 1425 303.2   1e-81
NP_055091 (OMIM: 616104) recombining binding prote ( 517) 1381 294.2 6.1e-79
XP_011526823 (OMIM: 616104) PREDICTED: recombining ( 455) 1327 283.0 1.2e-75
XP_011526825 (OMIM: 616104) PREDICTED: recombining ( 412) 1048 225.5 2.4e-58
XP_011526824 (OMIM: 616104) PREDICTED: recombining ( 436) 1048 225.5 2.5e-58


>>XP_016863661 (OMIM: 147183,614814) PREDICTED: recombin  (500 aa)
 initn: 3389 init1: 3389 opt: 3389  Z-score: 3776.9  bits: 708.4 E(85289): 1.2e-203
Smith-Waterman score: 3389; 100.0% identity (100.0% similar) in 500 aa overlap (1-500:1-500)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
              430       440       450       460       470       480

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
XP_016 YTNASTNSTSVTSSTATVVS
              490       500

>>NP_005340 (OMIM: 147183,614814) recombining binding pr  (500 aa)
 initn: 3389 init1: 3389 opt: 3389  Z-score: 3776.9  bits: 708.4 E(85289): 1.2e-203
Smith-Waterman score: 3389; 100.0% identity (100.0% similar) in 500 aa overlap (1-500:1-500)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
              430       440       450       460       470       480

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
NP_005 YTNASTNSTSVTSSTATVVS
              490       500

>>NP_056958 (OMIM: 147183,614814) recombining binding pr  (487 aa)
 initn: 3248 init1: 3248 opt: 3248  Z-score: 3619.9  bits: 679.3 E(85289): 6.9e-195
Smith-Waterman score: 3248; 100.0% identity (100.0% similar) in 481 aa overlap (20-500:7-487)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                          :::::::::::::::::::::::::::::::::::::::::
NP_056              MAPVVTGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                            10        20        30        40       

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
        50        60        70        80        90       100       

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       110       120       130       140       150       160       

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       170       180       190       200       210       220       

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       230       240       250       260       270       280       

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       290       300       310       320       330       340       

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       350       360       370       380       390       400       

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       410       420       430       440       450       460       

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
NP_056 YTNASTNSTSVTSSTATVVS
       470       480       

>>NP_976028 (OMIM: 147183,614814) recombining binding pr  (485 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:6-485)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
NP_976                MGGCRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                              10        20        30        40     

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
          50        60        70        80        90       100     

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
         110       120       130       140       150       160     

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
         170       180       190       200       210       220     

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
         230       240       250       260       270       280     

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
         290       300       310       320       330       340     

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
         350       360       370       380       390       400     

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
         410       420       430       440       450       460     

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
NP_976 YTNASTNSTSVTSSTATVVS
         470       480     

>>XP_011512142 (OMIM: 147183,614814) PREDICTED: recombin  (486 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:7-486)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
XP_011               MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
        350       360       370       380       390       400      

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
        410       420       430       440       450       460      

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
XP_011 YTNASTNSTSVTSSTATVVS
        470       480      

>>XP_016863663 (OMIM: 147183,614814) PREDICTED: recombin  (486 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:7-486)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
XP_016               MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
        350       360       370       380       390       400      

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
        410       420       430       440       450       460      

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
XP_016 YTNASTNSTSVTSSTATVVS
        470       480      

>>XP_016863664 (OMIM: 147183,614814) PREDICTED: recombin  (486 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:7-486)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
XP_016               MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
        350       360       370       380       390       400      

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
        410       420       430       440       450       460      

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
XP_016 YTNASTNSTSVTSSTATVVS
        470       480      

>>NP_976029 (OMIM: 147183,614814) recombining binding pr  (486 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:7-486)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
NP_976               MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
        350       360       370       380       390       400      

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
        410       420       430       440       450       460      

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
NP_976 YTNASTNSTSVTSSTATVVS
        470       480      

>>XP_005248218 (OMIM: 147183,614814) PREDICTED: recombin  (486 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:7-486)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
XP_005               MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
        350       360       370       380       390       400      

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
        410       420       430       440       450       460      

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
XP_005 YTNASTNSTSVTSSTATVVS
        470       480      

>>XP_016863662 (OMIM: 147183,614814) PREDICTED: recombin  (486 aa)
 initn: 3240 init1: 3240 opt: 3240  Z-score: 3611.0  bits: 677.6 E(85289): 2.1e-194
Smith-Waterman score: 3240; 100.0% identity (100.0% similar) in 480 aa overlap (21-500:7-486)

               10        20        30        40        50        60
pF1KB5 MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                           ::::::::::::::::::::::::::::::::::::::::
XP_016               MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB5 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB5 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB5 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB5 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB5 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB5 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
        350       360       370       380       390       400      

              430       440       450       460       470       480
pF1KB5 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
        410       420       430       440       450       460      

              490       500
pF1KB5 YTNASTNSTSVTSSTATVVS
       ::::::::::::::::::::
XP_016 YTNASTNSTSVTSSTATVVS
        470       480      




500 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 15:29:18 2016 done: Sat Nov  5 15:29:19 2016
 Total Scan time: 10.220 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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