GENSCAN 1.0	Date run:  5-Nov-116	Time: 15:27:33

Sequence gi568815587r:8821319_9032308 : 210990 bp : 43.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6961   7140  180  0  0  101   20   109 0.498   5.46
 1.02 Intr +   7417   7580  164  0  2   45   69   130 0.481   5.57
 1.03 Intr +  16414  16554  141  1  0   40   72   112 0.103   4.27
 1.04 Intr +  26341  26410   70  1  1   56   83    51 0.007   0.58
 1.05 Intr +  46819  46884   66  0  0   54   98    33 0.000   0.00
 1.06 Term +  71379  72311  933  2  0   -8   48   280 0.002   6.53
 1.07 PlyA +  72343  72348    6                               1.05

 2.00 Prom +  73609  73648   40                              -2.46
 2.01 Init +  90132  90353  222  2  0  103   78   136 0.630  12.67
 2.02 Intr +  93508  93612  105  0  0   53  111    41 0.890   3.31
 2.03 Intr +  98019  98156  138  2  0  128  -14   153 0.015   9.76
 2.04 Intr + 104327 104461  135  1  0   94   33    75 0.002   3.36
 2.05 Intr + 110728 110844  117  0  0  105  105    33 0.440   7.36
 2.06 Term + 111460 111534   75  0  0   60   55    71 0.254  -1.16
 2.07 PlyA + 113294 113299    6                               1.05

 3.03 PlyA - 115297 115292    6                              -0.45
 3.02 Term - 116855 116298  558  2  0   73   44   464 0.339  34.85
 3.01 Init - 124071 123841  231  0  0   63   47    86 0.170   0.26
 3.00 Prom - 124561 124522   40                              -5.56

 4.06 PlyA - 124720 124715    6                               1.05
 4.05 Term - 127157 127002  156  2  0   58   32   194 0.992   8.73
 4.04 Intr - 132019 131885  135  1  0   54   98    19 0.525   0.26
 4.03 Intr - 134980 134872  109  0  1   79   93    93 0.884   9.19
 4.02 Intr - 140865 140774   92  0  2   70  111     4 0.831  -0.31
 4.01 Init - 142995 142891  105  0  0   98  113   274 0.999  29.12
 4.00 Prom - 149410 149371   40                              -7.36

 5.16 PlyA - 149454 149449    6                               1.05
 5.15 Term - 151268 151205   64  1  1  102   42    72 0.220   1.36
 5.14 Intr - 162651 162557   95  0  2   43   89   103 0.570   4.66
 5.13 Intr - 162806 162754   53  0  2   88  116    26 0.996   4.03
 5.12 Intr - 164532 164393  140  2  2   45   99   101 0.997   7.01
 5.11 Intr - 166312 166230   83  1  2   88   98    18 0.975   1.24
 5.10 Intr - 166943 166800  144  2  0   55   95   101 0.447   7.98
 5.09 Intr - 182604 182444  161  1  2   34   89   366 0.361  31.01
 5.08 Intr - 183253 183031  223  1  1   68   99   149 0.105  11.70
 5.07 Intr - 198753 198627  127  2  1   97   28    27 0.002  -1.72
 5.06 Intr - 199879 199749  131  1  2   87    7   106 0.177   1.89
 5.05 Intr - 200637 200558   80  1  2   46  113    80 0.914   5.57
 5.04 Intr - 201438 201394   45  1  0   80  107     9 0.518   0.38
 5.03 Intr - 204536 204384  153  0  0   92  103   192 0.998  21.14
 5.02 Intr - 206243 206046  198  0  0   80   38   329 0.979  26.42
 5.01 Intr - 209607 209440  168  1  0   92  105    73 0.980   9.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  49747  49636  112  1  1   48   99   145 0.843   9.97
S.002 Term +  98019  98162  144  2  0  128   41   150 0.983  12.21
S.003 Init + 196554 196614   61  2  1   91   80   100 0.890   8.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:8821319_9032308|GENSCAN_predicted_peptide_1|517_aa
KCLDTEQCTFNSTTRPLRLHQNSFRSPALGKAKPPAPQDAALLWFVFRGSNAAVSAGKLG
GTLTKQKIPRCFAAVMSEFTQEGKLLQQRKLIRPDKSGEQRWKTGMRQETVEDKKVQEFE
HSHEQNQQSINVELGHVSKHRRSLEATTSKDQSPHDGEIKARMADIDSQGNETDYASAGC
KRNRNSSPVVTPTSSLPSEPSYSLQGTEEVESLNRPITGSEIEAIINSLPTKKSPGPNGF
TVEFYQRYKEELVPFLLKLFQSIEKEGILPNPFYEASIILIPKPGRDTTKKENFRPISLV
NINAKILSKILANRIQQHIEKLIHHDQVGFIPGMQGWFNIRKSINIIQHINRTKDKNHMT
ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRATYDKPTANIILNGQKLEAFPLKTG
TRQGCPLSPLLFNIVLKVLARAIRQEKEINGIQLGKEEVKLSLFADDMIVCLENPIVSAQ
NLLKLISNFSKVSGYKINVQKSQHSYTPITDKQRAKS

>gi568815587r:8821319_9032308|GENSCAN_predicted_CDS_1|1554_bp
aagtgcctggacacagagcagtgcaccttcaacagcacaactcggccgttaaggctgcac
caaaattcattcaggagcccagccctgggcaaagcaaagcctcctgccccccaggatgca
gcacttctctggtttgtcttcaggggctccaatgcagctgtatctgcggggaagctgggg
ggaacactgaccaaacagaagattccacgctgctttgctgcggtcatgtctgagtttacc
caagaggggaagctgctccaacagaggaagttaattagaccagacaagagcggggagcag
aggtggaagacagggatgagacaagaaactgtggaggacaaaaaggtacaagaatttgaa
catagccatgaacagaaccaacaatcaataaatgtagagcttggacatgttagcaaacat
cgaaggtctctggaagctacaacttccaaggaccaatctccgcatgatggagaaatcaaa
gccagaatggctgatattgattctcaaggcaatgaaacagactacgcaagtgctggctgc
aaaagaaacagaaacagcagccccgtggtcactccaactagctctttacccagtgaacca
agctactcgctgcagggtacagaagaagttgaatccctgaatagaccaataacaggctct
gaaattgaggcaataattaatagcttaccaaccaaaaaaagtccaggaccaaatggattc
acagtcgaattctaccagaggtacaaggaggagctggtaccattccttctgaaactattc
caatcaatagaaaaagagggaatcctccctaacccattttatgaggccagcatcattctg
ataccaaagcctggcagagacacaacaaaaaaagagaattttagaccaatatccctagtg
aacatcaatgcaaaaatcctcagtaaaatactggcaaaccgaatccagcagcacatcgaa
aagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacata
cgcaaatcaataaacataatccagcatataaacagaaccaaagacaaaaaccacatgact
atctcaatagatgcagaaaaggcctttgacaaaattcaacagcctttcatgctaaaaact
ctcaataaattaggtattgatgggacgtatctcaaaataataagagctacttatgacaaa
cccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaaccggc
acaagacagggatgccctctctcaccactcctattcaacatagtgttgaaagttctggcc
agggcaatcaggcaggagaaagaaataaatggtattcaattaggaaaagaagaagtcaaa
ttgtccctgtttgcagatgacatgattgtatgtttagaaaaccccatcgtctcagcccaa
aatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcacagcattcttatacaccaataacagacaaacagagagccaaatcatga

>gi568815587r:8821319_9032308|GENSCAN_predicted_peptide_2|263_aa
MDNCLAAAALNGVDRRSLQRSARLALEVLERAKRRAVDWHALERPKGCMGVLAREAPHLE
KQPAAGPQRVLPGEKYYSSVPEEGGATHVYRYHRGESKLHMCLDIGNGQAENISKDLYIE
VYPGTYSVTVGSNDLTKKTHVVAVDSGQSVDLVFPEEDEEEETARGACIATFSSLGPSRG
KSCAVGSNSGSSLAMTSEVLEASLSTKVYHQQPRTKEKEKGIHFPQRGRDRYLARGLCPP
CSEETAATRAQDQAALLQPTRAP

>gi568815587r:8821319_9032308|GENSCAN_predicted_CDS_2|792_bp
atggacaactgtttggcggccgcagcgctgaatggggtggaccgacgttccctgcagcgt
tcagcaaggctggctctagaagtgctggagagggccaagaggagggcggtggactggcat
gccctggagcgtcccaaaggctgcatgggggtccttgcccgggaggcgccccacctagag
aaacagccggcagccggcccgcagcgcgttctcccgggagagaaatattattcatctgtg
ccagaggaaggaggggcaacccatgtctatcgttatcacagaggcgagtcgaagctgcac
atgtgcttggacatagggaatggtcaggctgagaacatctctaaggacctctacatagaa
gtatatccagggacctattctgtcactgtgggctcaaatgacttaaccaagaagactcat
gtggtagcagttgattctggacaaagcgtggacctggtcttccctgaggaggatgaggag
gaagaaacagccaggggagcgtgcattgctactttctcctctttaggaccttccaggggc
aaaagctgtgctgtgggctccaactctggaagttctctggccatgacttctgaggtcctg
gaagcaagtctgtccaccaaggtctaccaccaacagccaagaacaaaggaaaaagaaaag
ggcatccacttcccccagaggggcagagacaggtaccttgcaaggggcttgtgcccgccc
tgttcagaggagacagctgccaccagggcccaagatcaagccgcactgctgcagcccacc
agagccccgtga

>gi568815587r:8821319_9032308|GENSCAN_predicted_peptide_3|262_aa
MGKSPGHLTKEEIQMANKHMKRCSTSYVIREMQTETTMGYQYTPIRMTKIYDTDNTKCSQ
GCGATGTFFYCWWEYKMVKEEMMDNRGNSSLPDKLPIFPDSARLPLTRSFYLEPMVTFHV
HPEAPVSSPYSEELPRLPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRN
ERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKNN
PGKVSSMIATTSHHADPMFRIV

>gi568815587r:8821319_9032308|GENSCAN_predicted_CDS_3|789_bp
atgggcaaaagtcctggacacctcaccaaagaggagatacagatggcaaataagcatatg
aaaagatgttccacatcatatgtcatcagggaaatgcaaactgaaacaacaatgggatac
caatacacacctattagaatgaccaaaatctacgacactgataacaccaaatgctctcaa
ggatgtggagcaacaggaactttcttttattgctggtgggaatacaaaatggttaaagag
gaaatgatggacaacagaggcaactctagtctacctgacaaacttcctatcttccctgat
tctgcccgcttgccactgaccaggtccttctatctggagcccatggtcactttccacgtg
cacccagaggccccggtgtcatccccttactctgaggagctgccacggctgccttttccc
agcgactctcttatcctgggaaattacagtgaaccctgccccttctctttcccgatgcct
tatccaaattacagagggtgcgagtactcctacgggccagccttcacccggaaaaggaat
gagcgggaaaggcagcgggtgaaatgtgtcaatgaaggctacgcccagctccgccatcat
ctgccagaggagtatttggagaagcgactcagcaaagtggaaaccctcagagctgcgatc
aagtacattaactacctgcagtctcttctgtaccctgataaagctgagaccaagaataac
cctggaaaagtttcctccatgatagcaaccaccagccaccatgctgaccctatgttcaga
attgtttga

>gi568815587r:8821319_9032308|GENSCAN_predicted_peptide_4|198_aa
MATLWGGLLRLGSLLSLSCLALSVLLLAQLSDAAKNFEDVRCKCICPPYKENSGHIYNKN
ISQKDCDCLHVVEPMPVRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMV
YLTLVEPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWK
LQVQEQRKSVFDRHVVLS

>gi568815587r:8821319_9032308|GENSCAN_predicted_CDS_4|597_bp
atggcgaccctgtggggaggccttcttcggcttggctccttgctcagcctgtcgtgcctg
gcgctttccgtgctgctgctggcgcagctgtcagacgccgccaagaatttcgaggatgtc
agatgtaaatgtatctgccctccctataaagaaaattctgggcatatttataataagaac
atatctcagaaagattgtgattgccttcatgttgtggagcccatgcctgtgcgggggcct
gatgtagaagcatactgtctacgctgtgaatgcaaatatgaagaaagaagctctgtcaca
atcaaggttaccattataatttatctctccattttgggccttctacttctgtacatggta
tatcttactctggttgagcccatactgaagaggcgcctctttggacatgcacagttgata
cagagtgatgatgatattggggatcaccagccttttgcaaatgcacacgatgtgctagcc
cgctcccgcagtcgagccaacgtgctgaacaaggtagaatatgcacagcagcgctggaag
cttcaagtccaagagcagcgaaagtctgtctttgaccggcatgttgtcctcagctaa

>gi568815587r:8821319_9032308|GENSCAN_predicted_peptide_5|621_aa
XLCQPGEYSADGFAPCQLCALGTFQPEAGRTSCFPCGGGLATKHQGATSFQDCETRDRRC
GGELGDFTGYIESPNYPGNYPANTECTWTINPPPKRRILIVVPEIFLPIEDDCGDYLVMR
KTSSSNSVTTYETCQTYERPIAFTSRSKKLWIQFKSNEGNSARGFQVPYVTYDGQREEEK
QRSLREVTEDYQELIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFKYTAQE
SREMFPRSFIRLLRSKVSSLKCERRTLLRGHEQPLEGWSHSLTVTALPETPPECHTIISL
WSRGPVGGDRPEVGEIRSAPNLGGSRQSSGPGRWTLEPRLAAWRCVSEKPSSGAGGGTRG
MARLSVIPGSATAWTGLLTEGGRKETDMREAASLRQQRRMKQAVQFIHKDSADLLPLDGL
KKLGSSKDMRRLMETNLSKLRSGPRVPWASKTNKLNQAKSEGLKKSEEDDMILVSCQCAG
KDVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSLPRHLKVVGQIEHLVITLG
SLRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINLDKHRLIMGKTDKEEIPFVETVSLNED
NPPITGPGDGVDDVLAPHYYF

>gi568815587r:8821319_9032308|GENSCAN_predicted_CDS_5|1866_bp
ngtctgtgtcaacctggtgaatattctgcagatggctttgcaccttgccagctctgtgcc
ctgggcacgttccagcctgaagctggtcgaacttcctgcttcccctgtggaggaggcctt
gccaccaaacatcagggagctacttcctttcaggactgtgaaaccagagacagaagatgt
ggaggggagctgggagatttcactgggtacattgaatccccaaactacccaggcaattac
ccagccaacaccgagtgtacgtggaccatcaacccaccccccaagcgccgcatcctgatc
gtggtccctgagatcttcctgcccatagaggacgactgtggggactatctggtgatgcgg
aaaacctcttcatccaattctgtgacaacatatgaaacctgccagacctacgaacgcccc
atcgccttcacctccaggtcaaagaagctgtggattcagttcaagtccaatgaagggaac
agcgctagagggttccaggtcccatacgtgacatatgatggtcagagagaagaagaaaag
caaagaagcctcagagaagtaaccgaggactaccaggaactcattgaagacatagttcga
gatggcaggctctatgcatctgagaaccatcaggaaatacttaaggataagaaacttatc
aaggctctgtttgatgtcctggcccatccccagaactatttcaagtacacagcccaggag
tcccgagagatgtttccaagatcgttcatccgattgctacgttccaaagtgtccagtctc
aaatgtgagagacggactctgctccgtggacatgagcagccccttgaagggtggtctcat
tctctaacagtaacagcactgccagaaacaccccctgaatgccacacgatcatctcactt
tggtcacgtggcccggtgggtggggaccgacctgaagttggagaaatccggagcgctccc
aacctcggagggagtcgccagtcctccgggcccgggcggtggaccctggagccccggctg
gcggcgtggaggtgcgtttctgagaagccgagcagcggcgcgggcggcgggactcgaggc
atggcccggctgtcggtgatccccgggtcggccacggcgtggacagggctcctcactgag
ggcggccgcaaggagaccgacatgcgggaggcggcgtcactgcgacagcagcgccggatg
aagcaggcggtgcagttcatccacaaggactccgccgacctgctgcccctggacggcctc
aagaagctgggctcgtccaaggacatgaggcgcctcatggaaaccaacctgtctaagctc
cgaagcggtccccgtgtcccttgggcctctaagacgaacaaactcaatcaggctaagtct
gaggggctaaagaagtctgaggaggatgacatgattttggtttcttgccagtgtgctgga
aaggatgtgaaagccttggttgacacaggctgcctatataatctcatctctttggcctgt
gtggacagattgggactcaaggagcatgtcaaatcccacaagcatgaaggagaaaagctt
tctctaccccggcatctcaaagtagtgggccagattgagcacctagtgatcacactgggc
tccctccgcctggactgcccagcagctgtggttgatgacaatgagaaaaacttgtccctt
ggtctacagactctccgatctctgaagtgcatcataaacttggataagcaccggctgatc
atggggaagacagacaaggaagaaatcccttttgtggagacagtctctttgaatgaagac
aatcctcctattactggtcctggagatggggtagatgatgttcttgctcctcattactac
ttctag