GENSCAN 1.0	Date run:  5-Nov-116	Time: 15:01:37

Sequence gi568815597f:109811024_110025186 : 214163 bp : 45.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   1734   1729    6                               1.05
 1.07 Term -   2243   2062  182  0  2    5   34   182 0.422   2.27
 1.06 Intr -   6188   6079  110  1  2   14   94    79 0.423   1.03
 1.05 Intr -   9985   9895   91  2  1  105   21    78 0.098   1.85
 1.04 Intr -  10154  10049  106  2  1  102   44    74 0.349   4.19
 1.03 Intr -  12581  12468  114  2  0   63   77    43 0.199   1.34
 1.02 Intr -  16079  15988   92  0  2   23   73    97 0.257   1.41
 1.01 Init -  17588  17549   40  2  1   70  116    -6 0.266   0.91
 1.00 Prom -  20070  20031   40                              -4.66

 2.00 Prom +  24240  24279   40                              -4.06
 2.01 Init +  30922  32528 1607  0  2   37   11   485 0.458  27.57
 2.02 Intr +  40338  40452  115  0  1   40   58    65 0.010  -0.85
 2.03 Intr +  46087  46158   72  0  0   83  105    44 0.428   5.20
 2.04 Term +  46755  46808   54  2  0   42   37    96 0.398  -2.54
 2.05 PlyA +  47237  47242    6                               1.05

 3.00 Prom +  48404  48443   40                              -5.56
 3.01 Init +  49355  49758  404  1  2   60   39   242 0.234  12.60
 3.02 Intr +  67546  67576   31  1  1  118  107    47 0.356   7.73
 3.03 Intr +  70663  70820  158  0  2   72   39   131 0.267   5.41
 3.04 Intr +  84925  85001   77  1  2  108   24    26 0.000  -2.64
 3.05 Intr +  94684  94773   90  2  0   89   61    70 0.821   4.37
 3.06 Intr +  95940  96057  118  1  1   -6   82    91 0.527  -1.38
 3.07 Intr +  99220  99349  130  1  1   65   23   112 0.407   3.10
 3.08 Term +  99790 100308  519  0  0   46   52   200 0.606   6.50
 3.09 PlyA + 102879 102884    6                              -0.45

 4.00 Prom + 102921 102960   40                             -10.74
 4.01 Init + 103215 103358  144  2  0   69  105   224 0.996  20.32
 4.02 Intr + 104611 104673   63  0  0  100   97    20 0.833   3.01
 4.03 Intr + 106270 106440  171  0  0   84   97   256 0.983  26.24
 4.04 Intr + 110824 110971  148  0  1   63  121   139 0.687  14.51
 4.05 Intr + 112143 113167 1025  1  2  111  100   413 0.587  35.13
 4.06 Intr + 113753 113805   53  1  2  124   94    11 0.425   3.01
 4.07 Term + 115040 115130   91  2  1   55   47    69 0.075  -3.31
 4.08 PlyA + 115895 115900    6                               1.05

 5.00 Prom + 122978 123017   40                              -1.16
 5.01 Init + 150203 150257   55  1  1   79   58    90 0.362   4.55
 5.02 Intr + 173767 174149  383  2  2   80   86   411 0.805  34.73
 5.03 Intr + 198011 198122  112  1  1   70   96    70 0.856   5.95
 5.04 Intr + 200191 200334  144  2  0   66   98   224 0.918  21.45
 5.05 Intr + 201339 201439  101  1  2   99  101    47 0.981   6.93
 5.06 Intr + 201874 201976  103  0  1  103  119    70 0.999  11.35
 5.07 Intr + 203740 203834   95  2  2   80   45    73 0.999   1.88
 5.08 Intr + 204402 204508  107  2  2   46   92   135 0.999   8.71
 5.09 Intr + 205321 205437  117  1  0  120   69   168 0.999  17.68
 5.10 Intr + 205644 205707   64  0  1   80   84    55 0.963   3.02
 5.11 Intr + 206472 206560   89  2  2  147   99    99 0.999  15.67
 5.12 Intr + 206923 206993   71  1  2  115   99    74 0.972  10.03
 5.13 Intr + 207350 207444   95  0  2  113   79    72 0.999   8.48
 5.14 Intr + 207529 207627   99  0  0  119   71    91 0.997  10.81
 5.15 Intr + 208028 208096   69  1  0   88   91     4 0.503   0.08
 5.16 Intr + 208525 208603   79  0  1   87   92    47 0.905   4.12
 5.17 Intr + 209708 209828  121  0  1   93   91    39 0.524   4.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  85510  85303  208  1  1   54   70   161 0.820   7.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:109811024_110025186|GENSCAN_predicted_peptide_1|244_aa
MVSMKCSAPLLAQANQDGAIRIFFGFHVLGSHHGCAWGPASTAAGSIQPVDPLSPSSLQQ
APRPWAAAAGPKQNDPIEPSEKSEWAFSKASKATLLSCSESFDGSLLPWHEGLALQAAPT
TQATVIPRNLLDIGSEPCCRYQNPRMLRPQGPTGGKPKSAAQDSSLCTEKGFPILPPASQ
YNAGEKEEEEEGEGEGEGEEEEEEEEEEEEAEEEEEEEKEEEEKNIYVYIYFIFLMFAIL
IDLI

>gi568815597f:109811024_110025186|GENSCAN_predicted_CDS_1|735_bp
atggtgtccatgaagtgctcagcaccattactagcacaagcaaaccaagatggcgccatc
cgcatcttcttcgggtttcacgtgttgggcagccaccacggctgtgcctggggcccggcc
agcacagctgcaggctcaattcagcctgtggaccccttgtctccaagctcactgcagcag
gccccaaggccttgggcagcagcagcaggtcccaaacaaaatgaccccatagagcctagc
gaaaagtcagagtgggctttttcaaaagcaagtaaggccacattactgtcctgctcagag
tccttcgatggctccctgctgccctggcatgaaggacttgccctgcaagctgctccaacc
acccaggctacagtcatccctcggaatctcttggatattggttccgaaccctgctgcaga
taccaaaacccacggatgctcagacctcaagggcccaccgggggcaagcccaaatcagct
gcccaggacagctcgctttgcacagagaaaggcttccccatccttcctccagccagccaa
tacaatgcaggagaaaaagaagaagaagaagaaggagaaggagaaggagaaggagaagag
gaagaggaagaggaagaagaagaagaagaagcagaagaagaagaagaagaagaaaaagag
gaagaagaaaaaaatatatatgtatatatatatttcatctttttaatgtttgccatcctg
atagatttaatttga

>gi568815597f:109811024_110025186|GENSCAN_predicted_peptide_2|615_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINGTKDKKHM
IISIDAEKAFDKIQQHFMLKTLNKLGIHGTYLKIIRAIYDKPTANIILNGQKLKAFPLKN
GTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAVLPKVIYRFSAIPIKLPMT
FFTELEKTTLKFIWNQKRARITKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLTICRKLKLDPFLTP
YTKINSRWIKDLNIRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIK
LKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKNKWHT
RRSYPMTGSVGPMPTEPSPLLVQQSEIDLRGSSLIKGSGLLDSSGPLPVCTTLPLRSEQL
LLQIECIWAIRGILV

>gi568815597f:109811024_110025186|GENSCAN_predicted_CDS_2|1848_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaacagaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaat
atatgcaaatcaataaatgtaatccagcatataaacggaaccaaagacaaaaaacacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaacacttcatgctaaaa
actctcaataaattaggtattcatgggacgtatctcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatgggcaaaaactgaaagcattccctttgaaaaat
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaggagaaagaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagacgacatgattgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatg
gccgtattgcccaaggtaatttacagattcagtgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgc
atcaccaagtcaatcctgagccaaaagaacaaagctggaggcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagccctcagaaataacaccgcatatctacaactatctg
atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctcaccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaatcaattcaagatggattaaagacttaaacattagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg
tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctacaaaa
tgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaat
gaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaacaaatggcacacc
aggagatcatatcccatgactggctcagtgggtcccatgcccacggagcctagcccactg
ctagtgcagcagtctgagattgacctgcgaggcagcagcctgataaaggggtccgggctg
ctggattctagtggtcctttaccagtgtgcacaacattgcctttgcgctcagagcagttg
ctgctacagattgaatgcatttgggccatccgtggaatcctggtgtaa

>gi568815597f:109811024_110025186|GENSCAN_predicted_peptide_3|508_aa
MSELPFTITTKRIKYPGIQLTKDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRVNIV
KMSILPKVIYRFNAIPIKKPMTFFTELEKTTLKFMWNQKRARIAKTILSKMNKAGGITLP
DFKIYYKAIVTKTAWSSNFCLIYNELRLLCTSSCLSDESAEEQFRVKPAFLPEVSPSLET
PSQARDVQKPAGKADALGGRLPFLVTHPRRVSSKQKVIVDRKRGRSAQQQPMERGLACWL
EDPGLGLTAATEMRHSVQNPSLLAALPPFTLSLTLKVGEDMTERAGCSANDYRMGLEAGR
AAWGLQRKKGAAGKPADSGSTREQVTLDSFRHSENGSSLKRLCRGLASEARPGESESLPG
SSRRQSRSPHPRTAVRPSAGAPTPQQPASERASEGGRRARPGPSCPYDRAGRRRALPSHG
KRRPRRWARDGLGRGLGGQAAGSGPSEPTAWARRLHWPGVPAADEPPLRTDWALAPGRRP
VAALQLHRDCQASLGNGGLLTPLHGGEH

>gi568815597f:109811024_110025186|GENSCAN_predicted_CDS_3|1527_bp
atgagtgaactcccattcacaattactacaaagagaataaaatatccaggaatccaactt
acaaaggatgtgaaggacctcttcaaggagaactacaaaccactgctaaatgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaagagtcaatatcgtg
aaaatgtccatactgcccaaggtaatttatagattcaatgccatccccatcaagaaacca
atgactttcttcacagaattggaaaaaactactttaaagttcatgtggaatcaaaagaga
gcccgcattgccaagacaatcctaagcaaaatgaacaaagctggaggcatcacactacct
gacttcaaaatatactacaaggctatagtaacgaaaacagcatggtcctccaatttctgc
ctcatctacaacgagctcaggctcctctgcacctcctcctgtctgagcgatgagtctgct
gaggaacaattccgggtcaagccggctttcttaccagaggtctcgccctcgctggagact
cccagccaggcccgggatgtgcagaagccagcagggaaggctgacgccttaggaggcaga
ttgcccttcctggtgactcaccccagaagggtcagctctaagcagaaagtcattgttgac
aggaagagggggagaagtgcccagcagcagccaatggaaaggggacttgcctgctggctg
gaggaccccggcctggggctcacggcagccacagaaatgaggcattcagtccaaaatcct
tccctgctggctgctttaccacccttcacgctgtctctcaccttgaaagtgggagaagac
atgactgaaagggcaggctgcagtgcaaatgactatagaatgggacttgaagctggccgg
gctgcttgggggctgcagaggaagaagggggctgccggcaaacctgctgactcaggctcc
acgagggagcaagtaacactggactcctttcggcactccgagaatgggtcctctcttaaa
aggctgtgccgagggctggccagtgaggctcggcccggggaaagtgaaagtttgcctggg
tcctctcggcgccagagccgctctccgcatcccaggacagcggtgcggccctcggccggg
gcgcccactccgcagcagccagcgagcgagcgagcgagcgagggcggccgacgcgcccgg
ccgggacccagctgcccgtatgaccgcgccgggcgccgccgggcgctgccctcccacggt
aagcgacggccgcggcgctgggcccgggacgggctggggcgggggctcggcggccaggcg
gccgggagcggcccctcggagccgacagcctgggcgcgccggctgcactggcccggcgtt
cccgccgcggacgaaccgcctttgcgcacggactgggccctggcgccagggcggaggccg
gtggcggccctgcagctgcaccgggactgccaggcttccctgggaaacggagggctgctc
accccattgcacggaggggaacactga

>gi568815597f:109811024_110025186|GENSCAN_predicted_peptide_4|564_aa
MTPSLSQTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQMETSCQIT
FEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLKSCFTKD
YEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSSQDVVTK
PDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDP
GSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPE
EASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPADVTGTA
LPRVGPVRPTGQDWNHTPQKTDHPSALLRDPPEPGSPRISSLRPQGLSNPSTLSAQPQLS
RSHSSGSVLPLGELEGRRSTRDRRSPAEPEGGPASEGAARPLPRFNSVPLTDTGHERQSE
GSFSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQPEGRPLTIL
DTLVCQCPSENVTPSPGHSTPDVV

>gi568815597f:109811024_110025186|GENSCAN_predicted_CDS_4|1695_bp
atgacaccctctctgtcacagacatggctgggctccctgctgttgttggtctgtctcctg
gcgagcaggagtatcaccgaggaggtgtcggagtactgtagccacatgattgggagtgga
cacctgcagtctctgcagcggctgattgacagtcagatggagacctcgtgccaaattaca
tttgagtttgtagaccaggaacagttgaaagatccagtgtgctaccttaagaaggcattt
ctcctggtacaagacataatggaggacaccatgcgcttcagagataacacccccaatgcc
atcgccattgtgcagctgcaggaactctctttgaggctgaagagctgcttcaccaaggat
tatgaagagcatgacaaggcctgcgtccgaactttctatgagacacctctccagttgctg
gagaaggtcaagaatgtctttaatgaaacaaagaatctccttgacaaggactggaatatt
ttcagcaagaactgcaacaacagctttgctgaatgctccagccaagatgtggtgaccaag
cctgattgcaactgcctgtaccccaaagccatccctagcagtgacccggcctctgtctcc
cctcatcagcccctcgccccctccatggcccctgtggctggcttgacctgggaggactct
gagggaactgagggcagctccctcttgcctggtgagcagcccctgcacacagtggatcca
ggcagtgccaagcagcggccacccaggagcacctgccagagctttgagccgccagagacc
ccagttgtcaaggacagcaccatcggtggctcaccacagcctcgcccctctgtcggggcc
ttcaaccccgggatggaggatattcttgactctgcaatgggcactaattgggtcccagaa
gaagcctctggagaggccagtgagattcccgtaccccaagggacagagctttccccctcc
aggccaggagggggcagcatgcagacagagcccgccagacccagcaacttcctctcagca
tcttctccactccctgcatcagcaaagggccaacagccggcagatgtaactggtaccgcc
ttgcccagggtgggccccgtgaggcccactggccaggactggaatcacaccccccagaag
acagaccatccatctgccctgctcagagaccccccggagccaggctctcccaggatctca
tcactgcgcccccagggcctcagcaacccctccaccctctctgctcagccacagctttcc
agaagccactcctcgggcagcgtgctgccccttggggagctggagggcaggaggagcacc
agggatcggaggagccccgcagagccagaaggaggaccagcaagtgaaggggcagccagg
cccctgccccgttttaactccgttcctttgactgacacaggccatgagaggcagtccgag
ggatccttcagcccgcagctccaggagtctgtcttccacctgctggtgcccagtgtcatc
ctggtcttgctggccgtcggaggcctcttgttctacaggtggaggcggcggagccatcaa
gagcctcagagagcggattctcccttggagcaaccagagggcagacccctcaccatcctg
gacacactcgtttgtcaatgtccctctgaaaatgtgacgcccagccccggacacagtact
ccagatgttgtctga

>gi568815597f:109811024_110025186|GENSCAN_predicted_peptide_5|635_aa
MEAKKSQAEGLHLASLLAAEVAARAGRSSELLFWFSCGRRRCPAALGCRTDKAWATAPQK
PTQLDAGAGRRVGDRVSEGAARAGGRAPEGERGGGGGSAAGRAGRGMSMPDAMPLPGVGE
ELKQAKEIEDAEKYSFMATVTKAPKKQIQFADDMQEFTKFPTKTGRRSLSRSISQSSTDS
YSSAASYTDSSDDEVSPREKQQTNSKGSSNFCVKNIKQAEFGRREIEIAEQDMSALISLR
KRAQGEKPLAGAKIVGCTHITAQTAVLIETLCALGAQCRWSACNIYSTQNEVAAALAEAG
VAVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKKYPNVFKKIRGIVEE
SVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDVMFGGKQV
VVCGYGEVGKGCCAALKALGAIVYITEIDPICALQACMDGFRVVKLNEVIRQVDVVITCT
GNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVTSLRTPELTWERVRSQVDHVIWPDGKRV
VLLAEGRLLNLSCSTVPTFVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVAS
LHLPSFDAHLTELTDDQAKYLGLNKNGPFKPNYYS

>gi568815597f:109811024_110025186|GENSCAN_predicted_CDS_5|1905_bp
atggaggctaagaagtcccaggctgaggggctgcatctggcgagtcttcttgctgcggag
gtggcggcgcgggcaggtcggagctcggagctgctgttctggttctcttgtggccgccgt
cgctgtccggctgccttgggctgccgaacagacaaggcgtgggccacagcacctcagaag
ccgacgcagctcgacgcaggggccggcaggagggtgggcgatcgcgtgtcggagggcgcc
gcgcgggcaggcgggcgggcgccagagggggaaagaggcgggggcggcgggtcagccgct
ggccgggccggccggggaatgtcgatgcctgacgcgatgccgctgcccggggtcggggag
gagctgaagcaggccaaggagatcgaggacgccgagaagtactccttcatggccaccgtc
accaaggcgcccaagaagcaaatccagtttgctgatgacatgcaggagttcaccaaattc
cccaccaaaactggccgaagatctttgtctcgctcgatctcacagtcctccactgacagc
tacagttcagctgcatcctacacagatagctctgatgatgaggtttctccccgagagaag
cagcaaaccaactccaagggcagcagcaatttctgtgtgaagaacatcaagcaggcagaa
tttggacgccgggagattgagattgcagagcaagacatgtctgctctgatttcactcagg
aaacgtgctcagggggagaagcccttggctggtgctaaaatagtgggctgtacacacatc
acagcccagacagcggtgttgattgagacactctgtgccctgggggctcagtgccgctgg
tctgcttgtaacatctactcaactcagaatgaagtagctgcagcactggctgaggctgga
gttgcagtgttcgcttggaagggcgagtcagaagatgacttctggtggtgtattgaccgc
tgtgtgaacatggatgggtggcaggccaacatgatcctggatgatgggggagacttaacc
cactgggtttataagaagtatccaaacgtgtttaagaagatccgaggcattgtggaagag
agcgtgactggtgttcacaggctgtatcagctctccaaagctgggaagctctgtgttccg
gccatgaacgtcaatgattctgttaccaaacagaagtttgataacttgtactgctgccga
gaatccattttggatggcctgaagaggaccacagatgtgatgtttggtgggaaacaagtg
gtggtgtgtggctatggtgaggtaggcaagggctgctgtgctgctctcaaagctcttgga
gcaattgtctacattaccgaaatcgaccccatctgtgctctgcaggcctgcatggatggg
ttcagggtggtaaagctaaatgaagtcatccggcaagtcgatgtcgtaataacttgcaca
ggaaataagaatgtagtgacacgggagcacttggatcgcatgaaaaacagttgtatcgta
tgcaatatgggccactccaacacagaaatcgatgtgaccagcctccgcactccggagctg
acgtgggagcgagtacgttctcaggtggaccatgtcatctggccagatggcaaacgagtt
gtcctcctggcagagggtcgtctactcaatttgagctgctccacagttcccacctttgtt
ctgtccatcacagccacaacacaggctttggcactgatagaactctataatgcacccgag
gggcgatacaagcaggatgtgtacttgcttcctaagaaaatggatgaatacgttgccagc
ttgcatctgccatcatttgatgcccaccttacagagctgacagatgaccaagcaaaatat
ctgggactcaacaaaaatgggccattcaaacctaattattacagn