GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:45:21

Sequence gi568815578r:36513869_36741335 : 227467 bp : 47.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10382  10473   92  0  2   87   97    79 0.923   8.41
 1.02 Intr +  11983  12138  156  0  0   95  105   268 0.998  29.41
 1.03 Term +  12945  13163  219  2  0   59   53   310 0.996  21.64
 1.04 PlyA +  14746  14751    6                               1.05

 2.00 Prom +  18566  18605   40                              -5.76
 2.01 Init +  27750  27818   69  2  0   51   42    54 0.134  -3.04
 2.02 Intr +  30715  30802   88  0  1   65   65    77 0.634   2.64
 2.03 Intr +  30991  31200  210  2  0   97   80   433 0.877  42.28
 2.04 Intr +  34164  34325  162  1  0   61   69   382 0.998  33.55
 2.05 Term +  35209  35381  173  2  2  129   47   404 0.999  38.39
 2.06 PlyA +  40085  40090    6                               1.05

 3.00 Prom +  47973  48012   40                              -8.36
 3.01 Init +  64907  65098  192  1  0  101   80   313 0.931  30.77
 3.02 Term +  77042  77563  522  1  0   60   48   372 0.452  24.68
 3.03 PlyA +  80050  80055    6                               1.05

 4.00 Prom +  80580  80619   40                              -4.66
 4.01 Init +  92084  92197  114  1  0   70  102   119 0.934  11.75
 4.02 Intr +  93847  93950  104  0  2  109  110    48 0.999   8.07
 4.03 Intr +  95733  95862  130  0  1   70   80   143 0.280  12.40
 4.04 Term +  98142  98183   42  2  0  100   45    24 0.150  -3.54
 4.05 PlyA +  98665  98670    6                               1.05

 5.20 PlyA -  98995  98990    6                               1.05
 5.19 Term - 100118  99998  121  1  1  107   47   104 0.997   6.15
 5.18 Intr - 100569 100437  133  1  1   27  103   117 0.665   6.80
 5.17 Intr - 101506 101357  150  2  0  128   60    70 0.653   8.33
 5.16 Intr - 118830 118727  104  2  2  118  105   129 0.945  17.42
 5.15 Intr - 119761 119675   87  0  0   91   92    79 0.995   7.69
 5.14 Intr - 120721 120622  100  2  1   72   80   117 0.992   8.47
 5.13 Intr - 126533 126499   35  1  2   52   64    34 0.109  -4.73
 5.12 Intr - 127510 127377  134  1  2  108   96    82 0.388  10.44
 5.11 Intr - 139833 139664  170  1  2   91   22   104 0.183   3.77
 5.10 Intr - 140971 140933   39  2  0   85   82    50 0.656   2.30
 5.09 Intr - 142543 142492   52  1  1   91   79    60 0.992   3.88
 5.08 Intr - 142664 142629   36  2  0  124  110     9 0.913   5.16
 5.07 Intr - 151229 151178   52  1  1  106  103    -4 0.968   1.81
 5.06 Intr - 151433 151368   66  1  0   78  106    44 0.881   3.22
 5.05 Intr - 152524 152421  104  1  2   81   15   133 0.820   4.27
 5.04 Intr - 157529 157473   57  2  0   73  111    26 0.009   2.48
 5.03 Intr - 167034 166948   87  0  0   81  106    48 0.478   6.07
 5.02 Intr - 168710 168650   61  1  1   78   92    41 0.709   2.24
 5.01 Init - 170591 170545   47  2  2   89  100    26 0.848   4.21
 5.00 Prom - 177139 177100   40                              -5.96

 6.04 PlyA - 177995 177990    6                               1.05
 6.03 Term - 180261 180199   63  0  0  108   39    86 0.966   3.59
 6.02 Intr - 193139 193104   36  2  0  110  110    36 0.276   6.46
 6.01 Init - 207867 207811   57  0  0   60   98    49 0.700   4.41
 6.00 Prom - 223249 223210   40                              -2.36


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 107200 107457  258  0  0   81   48   230 0.846  13.37
S.002 Sngl + 176593 176838  246  0  0   62   43   163 0.810   4.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:36513869_36741335|GENSCAN_predicted_peptide_1|155_aa
XLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDLLQLSIEDISM
KFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASDASDKQRQEAR
KRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL

>gi568815578r:36513869_36741335|GENSCAN_predicted_CDS_1|468_bp
ntcttaggaaaagtcctcagtgctgtgggcagtgcccagctactgatgtcccagaaattc
cagcagttccggggcctctgtgagcaaaacttgaaccctgatgccaacccacgccccaca
gcccaggacctggcagggttctgggacctgctacagctgtccatcgaggatatcagcatg
aagttcgatgaactctaccacctcaaggccaacagctggcagctggtggagacccccgag
aagaggaaggaagagaagaaaccaccccctccggtcccaaagaagccagccaaatccaag
ccggcagtgagccgcgacaaggcctcagacgccagcgacaagcagcgccaggaggcccgc
aagagactcctggcggccaagcgggcagcttctgtgcggcagaactcagccaccgagagc
gcagacagcatcgagatttatgtcccggaggcccagaccaggctctga

>gi568815578r:36513869_36741335|GENSCAN_predicted_peptide_2|233_aa
MRGGPGPTRLSRGAKAGPTDWDVELSGTESVNPYCWALLMSPVPDEDSRAQRGKPHPPEA
KMSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA
SLGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIH
EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD

>gi568815578r:36513869_36741335|GENSCAN_predicted_CDS_2|702_bp
atgagaggtggcccgggcccgacccggctgtcacggggggcaaaggcgggccccacggac
tgggacgtggagctctcgggcactgagtcagttaatccctactgctgggcactcctcatg
tctccagtcccagatgaagactctcgggctcagagagggaagccccacccaccagaagcc
aagatgtccagcaagcgggccaaagccaagaccaccaagaagcggccacagcgggccaca
tccaatgtcttcgcaatgtttgaccagtcccagatccaggagtttaaggaggctttcaac
atgattgaccagaaccgtgatggcttcattgacaaggaggacctgcacgacatgctggcc
tcgctggggaagaaccccacagacgaatacctggagggcatgatgagcgaggccccgggg
cccatcaacttcaccatgttcctcaccatgtttggggagaagctgaacggcacggacccc
gaggatgtgattcgcaacgcctttgcctgcttcgacgaggaagcctcaggtttcatccat
gaggaccacctccgggagctgctcaccaccatgggtgaccgcttcacagatgaggaagtg
gacgagatgtaccgggaggcacccattgataagaaaggcaacttcaactacgtggagttc
acccgcatcctcaaacatggcgccaaggataaagacgactag

>gi568815578r:36513869_36741335|GENSCAN_predicted_peptide_3|237_aa
MSDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNL
SVLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPA
PTNVLSLSVCSMPLHSGQGEKPAAPFPRGELESPKPLVTPGSTLTLLTRAEAGSPTGGLF
NTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQKQQDPSLPLLHTPIPLVSENPQ

>gi568815578r:36513869_36741335|GENSCAN_predicted_CDS_3|714_bp
atgtcggacagtgatctaggtgaggacgaaggcctcctctccctggcgggcaaaaggaag
cgcagggggaacctgcccaaggagtcggtgaagatcctccgggactggctgtacttgcac
cgctacaacgcctacccctcagagcaggagaagctgagcctttctggacagaccaacctg
tcagtgctgcaaatatgtaactggttcatcaatgcccggcggcggcttctcccagacatg
cttcggaaggatggcaaagaccctaatcagtttaccatttcccgccgcgggggtaaggcc
tcagatgtggccctcccccgtggcagcagcccctcagtgctggctgtgtctgtcccagcc
cccaccaatgtgctctccctgtctgtgtgctccatgccgcttcactcaggccagggggaa
aagccagcagcccctttcccacgtggggagctggagtctcccaagcccctggtgacccct
ggtagcacacttactctgctgaccagggctgaggctggaagccccacaggtggactcttc
aacacgccaccacccacacccccagagcaggacaaagaggacttcagcagcttccagctg
ctggtggaggtggcgctacagagggctgctgagatggagcttcagaagcagcaggaccca
tcactcccattactgcacactcccatccctttagtctctgaaaatccccagtag

>gi568815578r:36513869_36741335|GENSCAN_predicted_peptide_4|129_aa
MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIW
GVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWI
IFYTAIHYD

>gi568815578r:36513869_36741335|GENSCAN_predicted_CDS_4|390_bp
atgagcggcgggcggcggaaggaggagccgcctcagccgcagctggccaacggggccctc
aaagtctccgtctggagtaaggtgctgcggagcgacgcggcctgggaggataaggatgaa
tttttagatgtgatctactggttccgacagatcattgctgtggtcctgggtgtcatttgg
ggagttttgccattacgagggttcttgggaatagcaggattctgcctgatcaatgcagga
gtcctgtacctctacttcagcaattacctacagattgatgaggaagaatatggtggcacg
tgggagctcacgaaggaagggtttatgacctcttttgccttgttcatggtcatttggatc
atcttttacactgccatccattatgactga

>gi568815578r:36513869_36741335|GENSCAN_predicted_peptide_5|544_aa
MDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWID
WAASKLSGLTTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGR
RDLEIERPILGQNDNKSKTLKCSTLLVVGDNSPAVEAVMADCGGLPQVVQPGKLTEAFKY
FLQGMGYIPYVQLSHLSTESVPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGT
QESCESPDVLDRHQTMEISLDDVLLSALLRNNGKSAQQKKISAKPKLEFLCPRPGTCDHG
SRKFCYTVLVDPRERSKATAVALGSFPAGGPAELSLRLGEPLTIVSEDGDWWTVLSEVSG
REYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFLIRESQTRRGSYSLSVRLS
RPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSELADDICCLLKEPCVLQRAG
PLPGKDIPLPVTVQRTPLNWKELDSSLLFSEAATGEESLLSEGLRESLSFYISLNDEAVS
LDDA

>gi568815578r:36513869_36741335|GENSCAN_predicted_CDS_5|1635_bp
atggatgagctggctgaaatgctgcctcctgttcttacccacctaagcctgaaaagcatc
attggaattggagttggagctggagcttacatcctcagcagatttgcactcaaccatcca
gagcttgtggaaggccttgtgctcattaatgttgacccttgcgctaaaggctggattgac
tgggcagcttccaaactctctggcctgacaaccaatgttgtggacattattttggctcat
cactttgggcaggaagagttacaggccaacctggacctgatccaaacctacagaatgcat
attgcccaagacatcaaccaagacaacctgcagctcttcttgaattcctacaatggacgc
agagacctggagatcgaaagacccatactgggccaaaatgataacaaatcaaaaacatta
aagtgttctactttactggtggtaggggacaattcgcctgcagttgaggctgtgatggcg
gactgtgggggactgccccaggtagttcagcctgggaagctcaccgaggccttcaagtac
tttttgcagggaatgggctacatcccgtatgtgcagctcagtcacctgagcaccgagtca
gtaccatctgccagcatgactcggctcgcccgatcacgaacccactcaacctcgagtagc
ctcggctctggagaaagtcccttcagccggtctgtcaccagcaatcagtcagatggaact
caagaatcctgtgagtcccctgatgtcctggacagacaccagaccatggagatttccctc
gatgatgtgcttctgagtgctctgctgaggaacaatgggaagtctgcccagcagaagaaa
atctctgccaagcccaagcttgagttcctctgtccaaggccagggacctgtgaccatgga
agcagaaagttctgctatactgtcctagtggacccgagagagagaagcaaggccacagcc
gtggccctgggcagtttcccggcaggtggcccggccgagctgtcgctgagactcggggag
ccattgaccatcgtctctgaggatggagactggtggacggtgctgtctgaagtctcaggc
agagagtataacatccccagcgtccacgtggccaaagtctcccatgggtggctgtatgag
ggcctgagcagggagaaagcagaggaactgctgttgttacctgggaaccctggaggggcc
ttcctcatccgggagagccagaccaggagaggctcttactctctgtcagtccgcctcagc
cgccctgcatcctgggaccggatcagacactacaggatccactgccttgacaatggctgg
ctgtacatctcaccgcgcctcaccttcccctcactccaggccctggtggaccattactct
gagctggcggatgacatctgctgcctactcaaggagccctgtgtcctgcagagggctggc
ccgctccctggcaaggatatacccctacctgtgactgtgcagaggacaccactcaactgg
aaagagctggacagctccctcctgttttctgaagctgccacaggggaggagtctcttctc
agtgagggtctccgggagtccctcagcttctacatcagcctgaatgacgaggctgtctct
ttggatgatgcctag

>gi568815578r:36513869_36741335|GENSCAN_predicted_peptide_6|51_aa
MDELQDVQLTEIKPLLNDKNGTRNFQDFDCQPTQQDNKDEDLYDDPLPLNE

>gi568815578r:36513869_36741335|GENSCAN_predicted_CDS_6|156_bp
atggatgaacttcaggatgttcagctcacagagatcaaaccacttctaaatgataagaat
ggtacaagaaacttccaggactttgactgtcagcctactcaacaagataacaaggatgaa
gacctttatgatgatccacttccacttaatgaatag