GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:43:35

Sequence gi568815581r:43541913_43761534 : 219622 bp : 49.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   3110   3063   48  0  0   97  113    50 0.930   7.05
 1.02 Intr -   3567   3362  206  2  2  113   98   214 0.654  23.74
 1.01 Init -   5312   5239   74  2  2   93   37    37 0.374  -0.35
 1.00 Prom -   5656   5617   40                              -7.66

 2.00 Prom +   8837   8876   40                              -6.66
 2.01 Init +  14518  14699  182  0  2   74   96   137 0.945   9.76
 2.02 Intr +  15921  15951   31  0  1   95  101    20 0.848   2.13
 2.03 Intr +  41580  41792  213  2  0  116   68   136 0.822  13.31
 2.04 Intr +  72782  72983  202  1  1   70   51    83 0.511   1.66
 2.05 Intr +  73318  73398   81  2  0   90   86    17 0.523   1.31
 2.06 Intr +  80072  80221  150  0  0   83   15    86 0.096   0.93
 2.07 Term +  86596  86678   83  2  2   84   55    84 0.248   2.56
 2.08 PlyA +  87349  87354    6                               1.05

 3.17 PlyA -  89037  89032    6                               1.05
 3.16 Term - 100120  99998  123  1  0  125   50    85 0.433   6.78
 3.15 Intr - 101748 101576  173  1  2   89   85   275 0.996  26.96
 3.14 Intr - 104398 104000  399  2  0   67   20   146 0.282   0.18
 3.13 Intr - 119481 119154  328  0  1   86   96   145 0.024  10.37
 3.12 Intr - 124048 123940  109  0  1   43   64    52 0.001  -1.41
 3.11 Intr - 138894 138698  197  0  2    3   92   124 0.193   2.51
 3.10 Intr - 139184 139093   92  0  2   57  100    23 0.308   0.11
 3.09 Intr - 141039 140956   84  1  0   69   76    39 0.217   0.59
 3.08 Intr - 141395 141256  140  1  2   55   51    47 0.133  -2.19
 3.07 Intr - 148750 148654   97  2  1   63   99    70 0.502   4.67
 3.06 Intr - 156073 156017   57  2  0  108  121    44 0.455   8.56
 3.05 Intr - 169364 169178  187  2  1  122   30   121 0.018   8.96
 3.04 Intr - 178184 177704  481  1  1   28   81    86 0.011  -5.06
 3.03 Intr - 178496 178244  253  0  1   32   40   256 0.006  11.69
 3.02 Intr - 203792 203715   78  0  0  103   36   101 0.789   5.92
 3.01 Init - 207906 207798  109  0  1   66   93    41 0.405   2.78
 3.00 Prom - 208841 208802   40                              -5.46

 4.05 PlyA - 211846 211841    6                               1.05
 4.04 Term - 213851 213430  422  0  2  118   43   925 0.999  86.45
 4.03 Intr - 215595 215391  205  0  1   66   59   108 0.594   4.47
 4.02 Intr - 216493 216237  257  2  2   28  116    16 0.333  -4.44
 4.01 Init - 216829 216610  220  1  1   86   86   284 0.987  24.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 163647 163748  102  2  0  116   47    78 0.898   4.78
S.002 Term - 169364 169143  222  2  0  122   48   147 0.806  11.02
S.003 Sngl - 178524 178159  366  0  0   75   32   276 0.823  16.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:43541913_43761534|GENSCAN_predicted_peptide_1|110_aa
MAERELHFRKSSTLGLLVSAAISRNPSGVLGCPAPESPEDPNLVPQTKRLRVTRGHSPRF
SQKSPGNGSLREALIGPLGKLMDPGSLPPLDSEDLFQDLSHFQETWLAEX

>gi568815581r:43541913_43761534|GENSCAN_predicted_CDS_1|330_bp
atggctgagagggagctacactttcggaaatcatctaccctggggcttctggtttctgct
gcaatcagtagaaatcccagcggagtcctgggctgccccgcccctgagtcacccgaggac
cccaacctcgtcccccagactaagcgcctcagggtgactcgcgggcattctccccgcttc
tcgcagaaatcgcccggaaatgggagcttgcgcgaagcgctgatcggcccgctggggaag
ctcatggacccgggctccctgccgcccctcgactctgaagatctcttccaggatctaagt
cacttccaggagacgtggctcgctgaagnn

>gi568815581r:43541913_43761534|GENSCAN_predicted_peptide_2|313_aa
MTFLIYEVVLAALIWVLWGGGFEFLGAQSAVAIGRKGPTFLGREVELPLKEAEGGCQKRE
GEPALSFSFVNNLSKELSTLTASTSSPPMDSSTRFPPFHGNDLWFNEVQTLVNFEIALAK
VINGQLVFKLRLGSCPHALLALGWKDSENSKDIKQIHNGLSSINMSQVQTEMPQAPTWFN
ENIHQLCLCSHFTNKQGGEMDSEIVPGEPARFASSVKRGNNPRPVSPHDRKGSLRQGSSA
LMLYLGLIARESGLDGSPEHIKHCPLPRCSDCSSCHGDKDIFFLFQRWASEQSRQIETFS
AGQLASAGRSDPS

>gi568815581r:43541913_43761534|GENSCAN_predicted_CDS_2|942_bp
atgacctttctgatttacgaggtggtgctggctgcactcatttgggttctgtggggaggt
ggctttgagttcctcggggcccagtctgcagtggctattgggagaaaaggccccaccttc
ctgggcagagaagtggagcttccacttaaagaggcagaaggaggctgtcagaagagggaa
ggggaaccagcgctctccttcagctttgtcaataacttatcgaaggagctgtccacactc
actgcctccacttcctcacctcccatggattcctcaactcgctttccacccttccatgga
aatgatctgtggtttaatgaggtgcagactttggtcaattttgaaattgctcttgctaaa
gtcatcaatggccaacttgtcttcaaactacggcttggttcttgtcctcatgctcttctc
gctctgggatggaaggactcggagaattcgaaggatattaaacagattcataatggactc
agcagtataaacatgtctcaagtgcagacagaaatgccacaagctcctacttggtttaat
gaaaacatacaccagttgtgtctgtgttcccattttacaaataaacaaggtggggagatg
gactcggaaattgtccctggggagccagccaggtttgcctcatctgtgaaacggggtaac
aatcccagacctgtgtcgccgcatgatcgcaagggctctctgagacaagggagctcggct
ctaatgctgtacctgggcctcattgccagagagtctggtttagatgggtccccagagcac
attaagcactgtcctctgccaaggtgctcagactgcagctcctgtcatggggacaaggat
atcttcttcctgttccagagatgggccagcgagcagtctagacagatagagaccttcagt
gctggccagctggcttctgctggcaggtcggacccgtcgtga

>gi568815581r:43541913_43761534|GENSCAN_predicted_peptide_3|968_aa
MELTGSAGKEMDNGRITNKHLVQCPGMESSRKKIKAEPGIEPGTYREGGGAIVLTYALGI
GVGITGNTVQQPPQLTDSASIRQEDAFDNKIDIAEDGGQTPYEATLQQSFQYSPTTDLPP
LTNGYLPSISMYEIQTKYQSHNQYPNGNSKQKTTLNSRKPFPSTATTSVPQTVIPKKSGS
PEVKLKITKTIQNGRELFKSSLCGDLLNEVQASEHTKSKHESRKEKRKKPKKHDSSRSEE
RKSHKIPKLEPEEQNRPNERVHTISEKPREDPVLKEEAPVQPILSSVPTTEVSTGVKFQV
GDLVWSKVTVTPCWVPRLRGRRSHHCSSCLEILVLVPALSLKRSFMVSSLKFLTSTGKQK
PTFKGTAQMGWSPMASTTNVSLLLGHWEGTDQMSSRGPEFGGRRWVWQHQKPQIRISICH
RPGKEPLRLSFLRCEVERRISSLATSQGCWCSPPDHVCEKCLEDYAGRRHLTLRAQEAFL
GPDSRTGSLRAVGKRYCRNSQHQRYLLQGLLGGFLEERNANEYDCKLETREAASSTPRIP
YSPTHILQSESAPNHYFPYHVSLSKFLKRKANSHFLHLCAVVAVRRRSNMPGTRGWGGHK
QKQPCPAKYTPACHAQWETFRKFHVMAQKPDFLATATAAYPDFSASCLAATPHSLPQEEH
IFTEQHPAFPQSPNWHFPVSDARRRPNSGPAGGSKEMGTSSLGLVDTTGGPGDDYGVLGS
TANETEKKSSRRRKESSGGGAALAAAKAGGLLGDPGPGLRVLPCCPRSRFRRGLDLPSPA
WSQRPPGRQPAPGTRPPALLPGRAPRAANPDRTRTPGPGCHDTPDPGTGTIGPLPRLLEF
PERWHPLPFHPPAEATDAQREVGQAPKSLYHNQENRGKPEGSSKARKERTAFTKEQLREL
EAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKGGQPISPNGQDPEDGD
STASPSSE

>gi568815581r:43541913_43761534|GENSCAN_predicted_CDS_3|2907_bp
atggagctcacagggagtgctggcaaggagatggataatggacggataacaaataaacat
ttagtacaatgtccgggaatggaaagttctcgaaagaaaattaaagctgagcccggcatt
gagcctggtacttacagggagggtggtggagccatcgtcctcacgtatgcgctggggatc
ggggttgggatcacgggaaacacagttcaacaaccacctcaactcactgactccgccagc
atccgtcaggaggatgcctttgataacaaaattgacattgctgaagatggtggccagaca
ccatacgaagctaccttgcagcaaagctttcaatactcacctacaacagatcttcctcca
ctcacaaatggctacctgccatcaatcagcatgtatgaaattcaaaccaaataccagtcg
cataatcaatatcctaatggaaattctaaacagaagaccacattaaattctagaaaaccc
ttcccctccacagccaccacttcggtaccacaaactgtgattccaaagaagagtggctca
cctgaagttaaactaaaaataaccaaaactatccagaatggcagggaattgttcaagtct
tccctttgtggagaccttttaaatgaagtacaggcaagtgagcacacgaagtcaaagcat
gaaagcagaaaagaaaagaggaaaaaacccaaaaagcatgactcatcaagatctgaagag
cgcaagtcacacaaaatccccaaattagaaccagaggaacaaaatagaccaaatgagagg
gttcacaccatatcagaaaaaccaagggaagatccagtactaaaagaggaagccccagtt
cagccaatactatcttctgttccaacaacagaagtgtccactggtgttaagtttcaagtt
ggtgatcttgtgtggtccaaggtgacggtcacaccctgttgggtgccccgcctgcgagga
cggaggagccatcactgttccagctgcctggagatcttggtgctggtgccagccctcagc
ctcaagaggtctttcatggtttcttccttgaagttcctcacctccacgggcaaacagaag
cccacattcaagggaactgcccagatgggctggtcacctatggcctccacgaccaatgtc
tccctgctccttggtcattgggaaggaacagaccagatgtcatccaggggcccggaattt
ggggggcgccgctgggtgtggcagcatcagaagcctcagatccgcatctccatctgccac
aggccagggaaggaacctctgagactcagtttcctacgatgtgaagtggagagaagaatc
tcctctttagccacctctcagggctgctggtgttcgcccccagaccacgtctgtgagaaa
tgcttagaagactatgcagggcgccgccatttgacactcagagcccaggaagcctttctt
ggtccagacagcaggactggaagccttagagctgtcggcaagagatactgcaggaacagc
cagcaccagagatatctcctgcaaggcctcctaggtgggttcttggaagaaaggaatgcc
aatgaatatgattgcaagctagagacgagagaagcggcgtcctcaactccaagaatcccg
tattccccaacccacatccttcagtctgaaagtgcccctaaccactactttccctaccac
gtctccctttccaagttcctcaaacgcaaagcaaacagccatttcctgcacctgtgtgca
gtcgtagcagtacgtaggagatccaatatgcctggcacaagggggtggggtggccacaaa
cagaagcagccctgtcctgccaagtacacgcctgcctgccacgcacaatgggagacattc
cgcaagttccacgtgatggctcagaaaccagacttcctggcgacagcgacggcagcgtac
cctgacttctcagcctcctgcctggcagccaccccacacagcctgccccaggaggagcac
atcttcactgagcagcaccccgctttcccacagtcccccaactggcacttccctgtctca
gacgcccggcgcaggcccaactcaggcccggcagggggttccaaggaaatggggaccagc
agcctgggcctggtggacaccacaggaggcccaggcgatgactacggggtgcttgggagc
actgccaatgagacagagaagaaatcatccaggcggagaaaggagagttcaggagggggc
gcggcgctggcggcggccaaggccggagggctcctcggggaccccggcccggggctgcgc
gtccttccctgctgcccacgctcccgcttccggaggggtctggacctgccttctccggcc
tggagccagaggccgccgggcaggcagcccgcgccaggaactcggccccctgccctgctc
cccgggcgcgccccgcgggcggccaacccggatcggacgcggacccccgggccagggtgc
cacgacacccctgacccgggcaccgggactatcgggcccctcccccgccttctcgagttc
ccggaacggtggcacccactccccttccatcccccggcggaggccacggacgcgcagcgc
gaggtgggccaggcgcccaaatcactttaccacaaccaggagaacagagggaagccggag
ggcagcagcaaagcccgcaaggagaggacggccttcaccaaggagcagctgcgagagctg
gaggcagagtttgcccatcataactacctgactcggctccgcagatatgagattgcggta
aacctggacctctctgagcgccaggtcaaagtgtggttccagaaccgaaggatgaagtgg
aagcgtgtgaagggaggtcagcccatctcccccaatgggcaggaccctgaggatggggac
tccacagcctctccaagttcagagtga

>gi568815581r:43541913_43761534|GENSCAN_predicted_peptide_4|367_aa
MQLPLALCLVCLLVHTAFRVVEGQGWQAFKNDATEIIPELGEYPEPPPELENNKTMNRAE
NGGRPPHHPFETKALVEEQSCLEVGEEWLAGAAFKFRCRGMRQQTLVRAQGREDAGVVRV
WHQGIRTGSGAQKRKGFKESPPGNIGATSSCWYHWEGNKVAEKSTAQAPGPQPSPPHNLL
GLWGAKKGNCMGGQPGPSVFKMEDKGASPHSSPSRQGQLGSSDCLKGYVSEYSCRELHFT
RYVTDGPCRSAKPVTELVCSGQCGPARLLPNAIGRGKWWRPSGPDFRCIPDRYRAQRVQL
LCPGGEAPRARKVRLVASCKCKRLTRFHNQSELKDFGTEAARPQKGRKPRPRARSAKANQ
AELENAY

>gi568815581r:43541913_43761534|GENSCAN_predicted_CDS_4|1104_bp
atgcagctcccactggccctgtgtctcgtctgcctgctggtacacacagccttccgtgta
gtggagggccaggggtggcaggcgttcaagaatgatgccacggaaatcatccccgagctc
ggagagtaccccgagcctccaccggagctggagaacaacaagaccatgaaccgggcggag
aacggagggcggcctccccaccacccctttgagaccaaagcactggtcgaggaacagtct
tgcctggaggtgggggaagaatggctcgctggtgcagccttcaaattcaggtgcagaggc
atgaggcaacagacgctggtgagagcccagggcagggaggacgctggggtggtgagggta
tggcatcagggcatcagaacaggctcaggggctcagaaaagaaaaggtttcaaagaatct
cctcctgggaatataggagccacgtccagctgctggtaccactgggaagggaacaaggtg
gcagagaagtccactgcccaggctcctggaccccagccctccccgcctcacaacctgttg
ggactatggggtgctaaaaagggcaactgcatgggaggccagccaggaccctccgtcttc
aaaatggaggacaagggcgcctccccccacagctccccttctaggcaaggtcagctgggc
tccagcgactgcctgaagggctacgtgtccgagtacagctgccgcgagctgcacttcacc
cgctacgtgaccgatgggccgtgccgcagcgccaagccggtcaccgagctggtgtgctcc
ggccagtgcggcccggcgcgcctgctgcccaacgccatcggccgcggcaagtggtggcga
cctagtgggcccgacttccgctgcatccccgaccgctaccgcgcgcagcgcgtgcagctg
ctgtgtcccggtggtgaggcgccgcgcgcgcgcaaggtgcgcctggtggcctcgtgcaag
tgcaagcgcctcacccgcttccacaaccagtcggagctcaaggacttcgggaccgaggcc
gctcggccgcagaagggccggaagccgcggccccgcgcccggagcgccaaagccaaccag
gccgagctggagaacgcctactag