GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:39:30

Sequence gi568815594f:39598328_39878431 : 280104 bp : 42.31% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   3309   3348   40                              -3.45
 1.01 Init +  13681  13722   42  0  0   81  121    24 0.635   5.49
 1.02 Intr +  20479  20550   72  0  0   53   87    52 0.143   0.28
 1.03 Intr +  31416  31510   95  2  2   74   96    11 0.183  -1.66
 1.04 Intr +  36802  36971  170  1  2   47  116    95 0.937   6.87
 1.05 Intr +  39320  39579  260  0  2   35   30   216 0.899   6.76
 1.06 Intr +  40187  40370  184  1  1   65   84   278 0.901  23.54
 1.07 Term +  50609  50976  368  0  2   21   44   267 0.054   9.38
 1.08 PlyA +  51612  51617    6                               1.05

 2.04 PlyA -  52015  52010    6                               1.05
 2.03 Term -  74891  74322  570  2  0   36   37   263 0.774   9.45
 2.02 Intr -  81511  81407  105  1  0   93   75    49 0.630   3.59
 2.01 Init -  88076  88074    3  2  0   98   81     0 0.487   0.35
 2.00 Prom -  91634  91595   40                              -8.15

 3.00 Prom +  91901  91940   40                              -5.85
 3.01 Init +  99352  99548  197  0  2   11   49   270 0.020  13.85
 3.02 Intr + 120152 120340  189  2  0   49   85   145 0.023   8.08
 3.03 Term + 131451 131532   82  0  1   81   42    83 0.229  -0.81
 3.04 PlyA + 133334 133339    6                               1.05

 4.03 PlyA - 133663 133658    6                               1.05
 4.02 Term - 172641 171754  888  0  0   81   42   918 0.981  77.97
 4.01 Init - 173044 172682  363  1  0   82   44   481 0.851  40.20
 4.00 Prom - 174328 174289   40                             -10.05

 5.00 Prom + 175143 175182   40                              -9.65
 5.01 Init + 176517 176606   90  2  0   72  110   105 0.967  11.64
 5.02 Intr + 179355 179483  129  2  0   51  110    82 0.980   6.67
 5.03 Term + 180033 180107   75  2  0  129   54    41 0.966   1.66
 5.04 PlyA + 180271 180276    6                               1.05

 6.14 PlyA - 180637 180632    6                               1.05
 6.13 Term - 220651 220267  385  0  1   46   50   159 0.142   1.28
 6.12 Intr - 239881 239529  353  1  2   65   90   314 0.513  22.50
 6.11 Intr - 243729 243621  109  2  1   57   94   102 0.943   7.07
 6.10 Intr - 246474 246284  191  0  2   77  -57   176 0.898  -0.54
 6.09 Intr - 250643 250524  120  2  0  109   86    -3 0.714   1.37
 6.08 Intr - 251325 251193  133  2  1   33   63    86 0.020   0.33
 6.07 Intr - 264006 263892  115  1  1   45   89    68 0.375   1.19
 6.06 Intr - 264746 264542  205  2  1   73  119   138 0.997  13.25
 6.05 Intr - 265132 265009  124  0  1   73  101    68 0.986   6.27
 6.04 Intr - 268670 268534  137  2  2   62   94    72 0.966   3.65
 6.03 Intr - 271135 271067   69  1  0   42   94    89 0.887   3.36
 6.02 Intr - 274817 274659  159  2  0   61  110    49 0.780   3.66
 6.01 Intr - 278826 278740   87  0  0   96   64    48 0.472   2.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:39598328_39878431|GENSCAN_predicted_peptide_1|396_aa
MEMRPELERLTFQKKGLHTFFNLHVGPCRGVKPPVEKKAPEQLSPQVHAITLSQFFYFFV
ERGGLDVLPSKIWEKSTEAPAFSKCKGPTARTSLASSRDKNASGIRIQEETHMARLQGTE
LSRRIQVLSTAAESGKFGAGYTKGICAASHPKWKGMQSLLQPPQRWAARMPPKRPNTPTP
GRSYAFQVIICTAAVSDNNTHKLEGLFCKCSYYRIPNCRLFAGDAGSAAAELLPVQNRQP
GRGNAKPEKQPCSAAAAAVPESLRSPQEKLGRGEGCWFGWLLGRNHGGGAPGVWSPPGGT
AVAAVSVGLQSPQVPTGSLALGEEGACFFCGHPGHIKRRCYGCQPWLQLNLGEACPPGPL
EWLWSCPGEILRTFLVLGAGPLGELEVAVADETVQF

>gi568815594f:39598328_39878431|GENSCAN_predicted_CDS_1|1191_bp
atggagatgcggcctgagctggagaggctcactttccagaagaaaggactgcacactttt
ttcaacctgcatgttggaccttgcaggggtgtcaagccccctgttgagaagaaagctccg
gagcagctgagcccacaggtgcatgccatcacactcagccaatttttttacttttttgta
gagagagggggtctcgatgtgttgcccagcaagatctgggagaagagtactgaagcccca
gcgttcagcaaatgcaaaggccctacagcaagaaccagcttggcaagttccagggacaaa
aatgcaagtgggattagaatacaggaagaaactcacatggccaggctccagggtactgaa
ctaagtagaaggatacaagtgctgtcgacggccgcggagagcggcaagttcggagcaggc
tacactaaaggaatctgcgcggccagccaccctaagtggaagggaatgcaaagcctcctg
caacctccacagcgctgggcagcaagaatgcctcctaagcgtcccaacactccaacacct
ggaaggtcttacgctttccaagttataatatgtacagctgctgtttctgacaataacaca
cacaaactggaaggtctcttctgcaaatgtagctattacagaatacccaattgcaggctc
ttcgcgggggacgcgggctcggcagcagcggagcttctcccggtgcagaatcgccagccc
ggccgaggaaacgccaagcccgagaaacagccctgttctgccgcagccgccgcagtcccc
gagagcctgaggagcccccaggaaaaactggggcgaggggagggttgctggtttggctgg
ctgcttggcaggaaccatggagggggagcaccaggagtgtggagcccgcctggtggcact
gctgttgcagcagtttcagtgggcctccagtctcctcaggtgccaactggttctttggct
ctgggtgaagagggtgcctgcttcttttgtgggcaccctgggcatatcaagaggcgctgc
tatggatgtcagccatggctgcagttgaatcttggtgaggcttgtccacctggaccttta
gagtggctgtggagctgccctggggaaattctgcggacatttcttgtactcggagctggt
cctttgggagagctggaggttgctgttgctgatgagactgtgcagttttag

>gi568815594f:39598328_39878431|GENSCAN_predicted_peptide_2|225_aa
MYQQRRTGTFTWFSSVDTVSGRRDILPPTLTHPVSEACLTRAPEGSTKYGKEKPVPATAK
TSSEIEAVISILPTKKSPGPDGFTAKFYQRYKEKLVLFLVKLFQTIDKQGLFPNSSYEAS
IILIPKPDKDTTKKENFRPISLKNIDVKILNKILANQIQQHIKKLIHHDQVGFIPGIQVW
FTIHKSIKVIHHINRSNDNNHRIISIDAEKAFDKNSTTLHAKNPQ

>gi568815594f:39598328_39878431|GENSCAN_predicted_CDS_2|678_bp
atgtatcaacagaggagaaccgggactttcacctggttctcctctgttgatactgtgagc
ggaagaagggacattcttccacccaccttaacccaccctgtgtcagaggcctgccttaca
agagctcctgaaggaagcactaaatatggaaaggaaaaaccggtaccagccactgcaaaa
acaagttctgaaattgaggcagtaataagtatcctaccaaccaaaaaaagtccaggacca
gatggattcacagccaaattctaccagaggtacaaagagaagctggtactgttccttgtg
aaactattccaaacaatagataaacagggactcttccctaactcatcttatgaggccagc
atcatcctgataccaaaacctgacaaagacacaacaaaaaaagaaaatttcaggccaata
tctctgaagaacattgatgtgaaaatcctcaataaaatactggcaaaccaaatccagcag
cacatcaaaaagcttatccaccatgatcaagtcggtttcatccctgggatacaagtctgg
ttcaccatacacaaatcaataaaagtaatccatcacataaacagaagcaatgacaacaac
cacaggattatctcaatagatgcagaaaaggcctttgataaaaattcgacaacccttcat
gctaaaaaccctcaataa

>gi568815594f:39598328_39878431|GENSCAN_predicted_peptide_3|155_aa
MLQNKNDCSRFSGATPTENGPDRDPGERFPALDTAFSLRVPGLAESGRRSSRVRRRKPVR
LRPNLRWSCPPVLRHAPALLSPWAVDGTGCRGAGDNAQATQEPTAGGQDSGMAGCRSRAL
PRGEAAKACHIGGISIPKPVKSSFASILHSVYALP

>gi568815594f:39598328_39878431|GENSCAN_predicted_CDS_3|468_bp
atgttgcagaacaaaaacgactgcagtagattttctggggctacaccaactgaaaatggg
ccggaccgagatccgggagagcgttttcctgcgctagacacggcgttcagcctccgggtt
ccgggtctagctgagtcagggcggcgttccagccgagtgcggcgtcggaaacccgttcgg
ttgcgcccgaaccttcggtggagctgcccgccagtcctgcgccatgcgcctgcactcctc
agcccttgggcagtcgatggaactgggtgccgtggagcaggggacaatgctcaggccacg
caggagcccacggcaggggggcaggactcaggcatggcgggctgcaggtcccgagccctg
ccccgtggggaggcagctaaggcctgtcacattggcggcatttcaattcctaaacctgtc
aagtcctcgtttgcctccattttgcacagcgtgtacgctctgccttaa

>gi568815594f:39598328_39878431|GENSCAN_predicted_peptide_4|416_aa
MNKLRAEEWFCDVTIVADSLKFRGHKVILAACSPFLRDQFLLNPSSELQVSLMHSARIVA
DLLLSCYTGTLEFAVRDIVNYLTATSYLQMEHVVEKCQNALSQFTEPKIGLKEDGVREAS
LPGPQSQPRSPHPPPPLSPPLLRPVKLEFPLDEDLELKAEEEDEDEDVSDICIVKVESAL
DIAHRLKPPGGLGGGLGIGGSVGGHLGELAQSSVPPSTVAPPQGVVKACYSLSENAEGES
LLLTPGGRASVGATSGLVEAAAAAMVARGAGGSQGPLPGSFSGGNPLKNIKCTKCPEVFQ
GVEKLVFHMRQQHFIFMCPRCGKEFNHSNNLNHHRNVHRGVKSHSCGICGKCFTQKSTLH
DHLNLHSGAQPYRCSYCDMRFAHKPAIRRHLKEQHGKTTAENVLETSVAEINVLIR

>gi568815594f:39598328_39878431|GENSCAN_predicted_CDS_4|1251_bp
atgaacaagctccgggcagaggagtggttctgcgacgtgaccattgtggccgacagcctc
aagtttcgaggccacaaggtcatcttagccgcctgctcaccgttcctgcgggaccagttc
ctgcttaaccccagctcggagctgcaggtctccctgatgcacagtgcacgcatcgtggcc
gacctgcttctctcctgctacacgggcaccctggaattcgctgttagggacatcgtcaac
tatcttacagccacctcctacctgcagatggagcacgtggtggagaaatgccagaatgcc
ctcagccagttcactgagcccaaaataggcctcaaagaggatggggtccgtgaggctagc
cttccaggaccccaaagccagccccgaagcccccaccccccacctcctctatcccctcca
ctcctgcggccagtgaagctggagttcccactggatgaggacttggagctgaaagccgag
gaagaggatgaggatgaggacgtatctgacatctgcatcgtcaaggtggagtcggccctg
gacatcgcacaccggctcaagccccctggaggcctgggagggggcctgggcattggaggc
tccgtgggtggccaccttggggagctggcccagagcagcgtgccccccagcactgtggcc
ccaccgcagggtgtggtgaaggcctgctatagcctgtcggagaacgcagaaggggagagc
ctgctgttgactccgggaggccgggccagcgtgggggccacctcgggcctggtggaagca
gcagcggcggccatggttgcccggggggcggggggcagccagggacccctgcctgggagc
ttctcaggtggaaaccccttaaagaacatcaagtgcaccaagtgcccggaagtgttccag
ggcgtggagaagctggtcttccacatgcggcagcagcacttcatcttcatgtgccctcgc
tgtggcaaggagttcaaccacagcaacaacctcaaccaccacaggaacgtgcatcgtggt
gtcaagtcacactcgtgcggcatctgcggcaagtgcttcacacagaagtccaccctgcac
gaccacctcaacctgcactcgggagcgcagccctaccgctgctcctactgcgacatgcgc
ttcgcccacaagcctgccattaggcggcatctcaaggagcaacacggcaagaccaccgcc
gagaacgtgctggagaccagtgtggccgagattaatgtcctcatccgctag

>gi568815594f:39598328_39878431|GENSCAN_predicted_peptide_5|97_aa
MTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYT
KKIENLCAMGFDRNAVIVALSSKSWDVETATELLLSN

>gi568815594f:39598328_39878431|GENSCAN_predicted_CDS_5|294_bp
atgactctccgcacggtattattgtcattgcaagcactattggcagctgcagagccagat
gatccacaggatgctgtagtagcaaatcagtacaaacaaaatcccgaaatgttcaaacag
acagctcgactttgggcacatgtgtatgctggagcaccagtttctagtccagaatacacc
aaaaaaatagaaaacctatgtgctatgggctttgataggaatgcagtaatagtggccttg
tcttcaaaatcatgggatgtagagactgcaacagaattgcttctgagtaactga

>gi568815594f:39598328_39878431|GENSCAN_predicted_peptide_6|728_aa
VLSFTHPTSFHSAETYESLLQCLRMEDDKPLSRSLNADVPEQLITPLVSLGHISMLAPDQ
FASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMK
NNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIIT
PEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQ
CLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKEC
LWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCDVALCVINSKS
ALCNADSPKDPVLPMKFFTQPEKPKPAGVLGAVNKPLSATGRKPYVRSTGTETGSNINVN
SELNPSTGNRSRQLFSPIILLLALTTWEQSSEAAETGVSENEENPVRIISVTPVKNIDPV
KNKEINSDQATQGNISSDRGKKRTVTAAGAENIQQKTDEKVDESGPPAPSKPRRGRRPKS
ESQGNATKNDDLNKPINKGRKRAAVGQESPGGLEAGNAKAPKLQDLAKKAAPAERQIDLQ
RSLVDFSKARQPAKHPFFRAFLKSSTLVAPQPLPQENPGSLAFWMHLACPLQEEGQPQGL
KGSCPFATHLRPKAEKQNTGYPKTALLLDVGRTQGLRALHFLTIWQLGCPWKLIITSTGS
VFLEAMAH

>gi568815594f:39598328_39878431|GENSCAN_predicted_CDS_6|2187_bp
gttctgtcttttacacatcctacctcgttccactctgcagagacatatgagtccttgtta
cagtgcctaagaatggaggatgacaagccactcagtaggagtctgaatgctgatgtgcca
gaacaacttataactccattagtttcattgggccacatttctatgttagcaccagatcag
tttgcttccccaatgaaatctgtagtagcaaattttattgtgaaagatctgctaatgaat
gacaggtcaacaggtgaaaagaatggaaaactgtggtctccagatgaagaggtttcccct
gaagtactagcaaaggtacaggcaattaaacttctggtaaggtggctgttgggtatgaaa
aacaaccagtctaaatctgccaattcaacccttcggttattatcagcgatgttggttagt
gagggtgacctgacagagcaaaagaggatcagtaaatctgatatgtctcgcttgcgatta
gctgctggtagtgccataatgaagcttgctcaggaaccttgttaccatgaaattattacc
ccagaacagtttcagctctgtgcacttgttattaatgatgagtgttaccaagtaaggcag
atatttgctcagaagctgcataaggcacttgtgaagttactgctcccattggagtatatg
gcgatctttgccttgtgtgccaaagatcctgtgaaggagagaagagcacacgcacgacaa
tgtttactgaaaaatatcagtatacgcagggaatacattaagcagaatcctatggctact
gagaaattattatcactgttgcctgaatatgtagttccatacatgattcacctgctagcc
catgatccagattttacaagatcacaagatgttgatcagcttcgtgatatcaaagagtgc
ctatggttcatgcttgaagttttaatgacaaagaatgaaaacaatagccatgcctttatg
aagaagatggcagagaacatcaagttaaccagagatgcccagtctccagatgaatccaag
acaaatgaaaaactgtatacagtatgtgatgtggctctctgtgttataaatagtaaaagt
gctttgtgcaatgcagattcaccaaaggacccagtcctcccaatgaaattttttacacaa
cctgaaaagccaaagcctgctggagtactaggtgcagtaaataagcctttatcagcaacg
ggaaggaaaccctatgttagaagcactggcactgagactggaagcaatattaatgtaaat
tcagagctgaacccttcaaccggaaatcgatcaaggcaacttttctctccaattattttg
ttactagcactcactacttgggaacagagttcagaggcagcagaaactggagttagtgaa
aatgaagagaaccctgtgaggattatttcagtcacacctgtaaagaatattgacccagta
aagaataaggaaattaattctgatcaggctacccagggcaacatcagcagtgaccgagga
aagaaaagaacagtaacagcagctggtgcagagaatatccaacaaaaaacagatgagaaa
gtagatgaatcgggacctcccgccccttccaaacccaggagaggacgtcgacccaagtct
gaatctcagggcaatgctaccaaaaatgatgatctaaataaacctattaacaagggaagg
aagagagctgcagtgggtcaggagagccctgggggtttggaagcaggtaatgccaaagca
cccaaactgcaagatttagccaaaaaggcagcaccagcagaaagacaaattgacttacaa
aggagcttagtggacttctccaaagcaaggcagcccgcgaagcacccatttttcagagcc
tttttgaagagctccaccctggtggccccccaacccctaccccaagaaaaccctggcagt
ttagccttctggatgcatctggcatgtcccctccaagaggaaggtcaaccgcagggactg
aaaggaagctgtccctttgcaacccacctcaggccaaaagctgaaaagcaaaatactggt
taccccaaaactgccttacttttagatgtaggccggacccagggactaagggctctgcat
tttttgaccatttggcagctcggctgcccatggaagcttataattacgagcacaggatct
gtctttttagaagccatggctcattag