GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:29:23

Sequence gi568815592f:135085900_135317977 : 232078 bp : 40.11% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    217    212    6                               1.05
 1.03 Term -    429    271  159  0  0   37   43   123 0.104  -0.34
 1.02 Intr -   5326   5169  158  2  2   75   84    99 0.359   7.01
 1.01 Init -   6735   6732    4  0  1   87  106     0 0.698   1.91
 1.00 Prom -  19183  19144   40                              -4.05

 2.00 Prom +  25850  25889   40                              -6.25
 2.01 Sngl +  26638  27174  537  0  0   39   42   246 0.899  10.93
 2.02 PlyA +  27978  27983    6                               1.05

 3.05 PlyA -  28427  28422    6                               1.05
 3.04 Term -  43336  43242   95  2  2   89   43    95 0.461   2.11
 3.03 Intr -  43507  43390  118  1  1  127   42    47 0.463   3.12
 3.02 Intr -  50364  50072  293  1  2   93   28    92 0.144  -0.37
 3.01 Init -  61666  61555  112  1  1   70   82    67 0.287   4.73
 3.00 Prom -  65583  65544   40                              -5.65

 4.03 PlyA -  65700  65695    6                               1.05
 4.02 Term -  69365  69020  346  1  1   35   45   287 0.422  12.08
 4.01 Init -  81703  81672   32  1  2   85   97    15 0.045   1.36
 4.00 Prom -  87478  87439   40                              -6.95

 5.00 Prom +  93208  93247   40                              -4.75
 5.01 Init +  95615  95637   23  1  2  107   97    30 0.880   4.87
 5.02 Intr +  97483  97635  153  1  0  102   -3    95 0.242   0.07
 5.03 Intr + 100004 100121  118  2  1   98   78   150 0.970  14.55
 5.04 Intr + 101935 102006   72  0  0   34  131    93 0.963   6.88
 5.05 Intr + 103892 103984   93  1  0   25   89   111 0.916   4.14
 5.06 Intr + 106038 106120   83  2  2   73   57    29 0.783  -4.18
 5.07 Intr + 106425 106659  235  0  1   55   75   260 0.624  18.17
 5.08 Intr + 107939 108019   81  1  0  106  110    53 0.993   8.22
 5.09 Intr + 108457 108561  105  0  0   73   63   129 0.887   8.39
 5.10 Intr + 109849 110103  255  0  0  104   84    91 0.982   7.02
 5.11 Intr + 111062 111424  363  1  0   67   75   202 0.984  11.26
 5.12 Intr + 113009 113151  143  1  2   57   75    58 0.973  -0.37
 5.13 Intr + 114186 114300  115  0  1   61   94    84 0.791   5.83
 5.14 Intr + 114391 114516  126  0  0   53   82   176 0.856  13.46
 5.15 Intr + 115740 115850  111  2  0   60  131    52 0.973   6.36
 5.16 Intr + 117318 117425  108  2  0  112   91    61 0.964   8.36
 5.17 Term + 131965 132081  117  0  0   79   53   179 0.652  11.06
 5.18 PlyA + 132276 132281    6                               1.05

 6.00 Prom + 135664 135703   40                              -4.45
 6.01 Init + 158498 158712  215  1  2  102  -10   156 0.836   5.54
 6.02 Intr + 160019 160167  149  2  2   77   97   113 0.806  10.06
 6.03 Intr + 162599 162755  157  0  1   45   45   107 0.568   0.25
 6.04 Intr + 166305 166375   71  0  2  104  115    85 0.569  10.71
 6.05 Term + 167309 167412  104  0  2  100   47    46 0.391  -0.84
 6.06 PlyA + 171561 171566    6                               1.05

 7.03 PlyA - 172835 172830    6                               1.05
 7.02 Term - 178043 177639  405  2  0  -17   42   219 0.363   1.00
 7.01 Init - 180251 180159   93  2  0   72   75   100 0.491   7.53
 7.00 Prom - 203190 203151   40                              -4.65

 8.00 Prom + 203900 203939   40                              -5.85
 8.01 Init + 205546 205780  235  0  1   72   97    88 0.084   6.45
 8.02 Intr + 219135 219155   21  1  0   99   98    16 0.020   0.30
 8.03 Intr + 226018 226136  119  2  2  120   66    11 0.324   1.36
 8.04 Term + 226776 226925  150  2  0   75   45   102 0.836   1.53
 8.05 PlyA + 227034 227039    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_1|106_aa
MASRGCPHSMAPFLHLQSQQQQVEDSHRIYGTLLLSTHLPLTLTWERFSSLMTHSICGST
SVSLSAAMGNFGKRCAGDVKWPFQTPLPRGFPAGLKERYSTFPGID

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_1|321_bp
atggcttctagaggctgcccacattccatggcccctttcctccatcttcaaagccagcaa
cagcaggtagaagactcacatcgcatctatggaacccttctgctgtctacacatctccct
ctgactctgacctgggaaaggttctcaagtttaatgactcattcaatctgtggcagcaca
tcagtctctctgtcagcagccatgggtaactttggcaagaggtgtgctggggatgtcaag
tggccattccagacacccttgccaaggggctttcctgctggcctcaaggaaagatacagt
acatttcctggaattgattag

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_2|178_aa
MEQYREPRNKAKYLQPTDLRQSKHNIKWGKDTLFNKWCWDNWQATCRMKLDLHFSPFTKI
NSRWIKDLNLRPETINTLEDNIGKTLLVFGLGKAFMTQNPKANAIKTKINRWDVVKLKGF
CTAKEIISRVNRQPTEWEKIFTIYTSDKRLISRIYKELKEISKKKNEQSHQEVGQGHE

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_2|537_bp
atggaacagtatagagaacccagaaataaagccaaatacttacagcctactgatcttcga
caaagcaaacacaatataaagtggggaaaggacacgctattcaacaaatggtgctgggat
aattggcaagccacatgtagaatgaaactggatcttcatttctcaccttttaccaaaatc
aactcaagatggatcaaagacttaaatctaagaccagaaaccataaatactttagaagat
aacattggaaaaacccttctagtctttggcttaggcaaagcgttcatgacccagaaccca
aaagcaaatgcaataaaaacaaagataaatagatgggacgtagttaaactaaaaggcttc
tgcacagcaaaagaaataatcagcagagttaacagacaacccacagagtgggagaaaatc
ttcacaatctatacatctgacaaaagactaatatccagaatctacaaagaactcaaagaa
atcagcaagaaaaaaaatgaacaatcccatcaagaagtgggccaaggacatgaatag

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_3|205_aa
MDGPTDLQLAILANNTLRKWLVLDSTIRECVLGNRRAAACVAHDHHSTRHSCWALGMATT
AAGVLGSSWSLRALCSLSFQSTTTKLCMELELLVEAGRDFPLYRLHLSPWLFFLCPDVTK
LSCNGFMTHIALGGWVKVDLWSWNSTTCKSCISWPSGQLLGKPESPQGQSSQCAATAATA
AVASQPQEQSELYCWSLDSSRYSQT

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_3|618_bp
atggatgggcccacagacctacagttggcaatcttggccaataacacactccgaaaatgg
ttagttctggatagcacgatcagggagtgtgttctggggaacaggagagctgctgcctgt
gttgcccatgatcatcattccaccaggcacagttgttgggctctaggcatggccaccact
gccgctggtgtgctgggttcctcatggagcctaagagccctgtgttctctgagttttcaa
agtactacaaccaagctgtgtatggagctggaattgctggtggaggctggcagggacttt
cctctctacaggttacatctttctccgtggcttttcttcctgtgtcctgatgtcacaaag
ttatcgtgtaatggcttcatgacccacatagcacttgggggctgggtcaaagtagaccta
tggagttggaactccaccacctgtaagagctgcattagctggccctctgggcagctgcta
ggaaaaccagaatctccacaaggccagtcaagccagtgtgcagctacagcggctacggca
gctgtggcttcacagccacaggaacaatctgagctgtattgttggagcctggattcttct
agatattctcaaacctag

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_4|125_aa
MLKSASKKSKREATNLEKRLEESLTRITSLEKNINDLMELKNTAREFREAYTSINSQIDQ
VEERISEMEDQLNEIKCEDKIREKRMKKNEQSLQEIWDYVKRPNLRLIGVPESDGENGTK
MENTL

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_4|378_bp
atgctgaaatcagcttccaaaaaatccaaaagggaagctacgaaccttgaaaaaaggtta
gaggaatcgctaactagaataaccagtttagagaagaatataaatgacctgatggagctg
aaaaacacagcacgagaatttcgtgaagcatacacaagtatcaatagccaaattgatcaa
gtggaagaaaggatatcagagatggaagatcaacttaatgaaataaagtgtgaagacaag
attagagaaaaaagaatgaaaaagaatgaacaaagcctccaagaaatatgggactatgtg
aaaagaccaaacctacgtttgattggtgtacctgaaagtgatggggagaatggaaccaag
atggaaaacactctttag

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_5|766_aa
MARRPRHSTSFLFRFFARFVSLTECNIHSCTLVTTPGLAGGESSASTLKSAFENPLTVGI
YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY
LPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRALLCHIQRSNFPKAAGTLHCVGVLYRD
RTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNSHLMGFAQAPPTAQLPAT
GQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRI
KELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCLGEHHSTP
SLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEFAETLQFIDSDSSSWCDLSSFEFF
EEADFSPSQHHTGKALQLQQREGNGTKPAGEPSPRVNKRMLSESSLDPPKVLPPARHSTI
PLVILRKKRGQASPLATGDCSSFIFADVSSSTPKRSPVKSLPFSPSQFLNTSSNHENSDL
EMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTVFRTPAIKRSILESSPRTPTPFKHAL
AAQEIKYGPLKMLPQTPSHLVEDLQDVIKQESDESGIVAEFQENGPPLLKKIKQEVESPT
DKSGNFFCSHHWEGDSLNTQLFTQTSPVADAPNILTSSVLMAPASEDEDNVLKAFTVPKN
RSLASPLQPCSSTWEPASCGKMEEQMTSSSQARKYVNAFSARTLVM

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_5|2301_bp
atggcccgaagaccccggcacagcacctcttttctttttcgtttctttgcacggtttgtt
tccttgacagaatgtaacattcatagttgtactcttgtaaccacaccgggtctagcaggt
ggggagtcgagtgcatcaaccctgaaatcagcctttgaaaatcctctgactgttggcata
tatagcagtgacgaggatgatgaggactttgagatgtgtgaccatgactatgatgggctg
cttcccaagtctggaaagcgtcacttggggaaaacaaggtggacccgggaagaggatgaa
aaactgaagaagctggtggaacagaatggaacagatgactggaaagttattgccaattat
ctcccgaatcgaacagatgtgcagtgccagcaccgatggcagaaagtactaaaccctgag
ctcatcaagggtccttggaccaaagaagaagatcagagagccctgctgtgccacattcaa
aggagtaatttccccaaggcagctggaactttacattgtgttggagtcttgtaccgcgac
cgaactgataatgctatcaagaaccactggaattctacaatgcgtcggaaggtcgaacag
gaaggttatctgcaggagtcttcaaaagccagccagccagcagtggccacaagcttccag
aagaacagtcatttgatgggttttgctcaggctccgcctacagctcaactccctgccact
ggccagcccactgttaacaacgactattcctattaccacatttctgaagcacaaaatgtc
tccagtcatgttccataccctgtagcgttacatgtaaatatagtcaatgtccctcagcca
gctgccgcagccattcagagacactataatgatgaagaccctgagaaggaaaagcgaata
aaggaattagaattgctcctaatgtcaaccgagaatgagctaaaaggacagcaggtgcta
ccaacacagaaccacacatgcagctaccccgggtggcacagcaccaccattgccgaccac
accagacctcatggagacagtgcacctgtttcctgtttgggagaacaccactccactcca
tctctgccagcggatcctggctccctacctgaagaaagcgcctcgccagcaaggtgcatg
atcgtccaccagggcaccattctggataatgttaagaacctcttagaatttgcagaaaca
ctccaatttatagattctgattcttcatcatggtgtgatctcagcagttttgaattcttt
gaagaagcagatttttcacctagccaacatcacacaggcaaagccctacagcttcagcaa
agagagggcaatgggactaaacctgcaggagaacctagcccaagggtgaacaaacgtatg
ttgagtgagagttcacttgacccacccaaggtcttacctcctgcaaggcacagcacaatt
ccactggtcatccttcgaaaaaaacggggccaggccagccccttagccactggagactgt
agctccttcatatttgctgacgtcagcagttcaactcccaagcgttcccctgtcaaaagc
ctacccttctctccctcgcagttcttaaacacttccagtaaccatgaaaactcagacttg
gaaatgccttctttaacttccacccccctcattggtcacaaattgactgttacaacacca
tttcatagagaccagactgtgaaaactcaaaaggaaaatactgtttttagaaccccagct
atcaaaaggtcaatcttagaaagctctccaagaactcctacaccattcaaacatgcactt
gcagctcaagaaattaaatacggtcccctgaagatgctacctcagacaccctctcatcta
gtagaagatctgcaggatgtgatcaaacaggaatctgatgaatctggaattgttgctgag
tttcaagaaaatggaccacccttactgaagaaaatcaaacaagaggtggaatctccaact
gataaatcaggaaacttcttctgctcacaccactgggaaggggacagtctgaatacccaa
ctgttcacgcagacctcgcctgtggcagatgcaccgaatattcttacaagctccgtttta
atggcaccagcatcagaagatgaagacaatgttctcaaagcatttacagtacctaaaaac
aggtccctggcgagccccttgcagccttgtagcagtacctgggaacctgcatcctgtgga
aagatggaggagcagatgacatcttccagtcaagctcgtaaatacgtgaatgcattctca
gcccggacgctggtcatgtga

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_6|231_aa
MVEFSYCSVVISKLCVAVSLAAKKNPSNNPRNHCPGLESMGSSVSELTVSGGRDSRFSAV
PALASSTVKRSKASALNLDVMKRYYFSPLQFLVPSVGQWRHHTPSEACRKDPETTDKKPT
EDKRSLVSQEQPQDVPMMSWQPFLVASSVRADEYLLLLGNLTADLGLPGSKLLISGSGMT
SDCHSAAMENVHSEEESVSRSFPFSLTQKSSPTSSGNHPDDAQVEGIFPTF

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_6|696_bp
atggtggaattttcctattgttcagttgtcatttctaagctctgtgttgctgtcagcctg
gcagccaagaaaaacccctctaacaaccctagaaaccactgccctggcttggaatcaatg
ggcagcagtgtttctgagctgacagtttcaggtggaagagacagcagattttcagctgta
cctgctttggcctcctcaactgtgaaacgctccaaggcctcagccttgaatcttgatgtg
atgaaaagatattacttttctcctctacagtttctggtgcccagcgtggggcaatggaga
catcacactccctctgaagcctgcagaaaagatcctgagacaaccgacaaaaagccaaca
gaagacaaaagaagtttggtttcccaggagcaaccacaggatgtgcccatgatgtcttgg
cagcctttcctggtggcttcttcagtgagggctgatgagtatctgcttttactggggaac
ttgacagctgacttgggccttccaggatccaaactccttatatcaggtagtggaatgaca
agtgactgtcattctgctgctatggagaatgtgcactcagaggaagagagcgtttcaagg
tctttccctttctctctaacccaaaaatcatctccgacttcctctgggaaccacccagat
gatgcccaagttgaaggcatcttccccacgttctga

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_7|165_aa
MGPNPTDWCPFKKRKFYGQEHSKARALRKDHGTASVEIKKTKSESFGQTVLPTWKALGLV
LWKEENTSPKYEEIIQNAKAPWSRSSRSPPPSAKGFLNSSTSIYRGLAMCQMLCRCWKHN
NEEASPSPQRASVSRQILMLLFVDSAWAWALPPSSPSIASQRLIQ

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_7|498_bp
atgggccctaatccaactgactggtgtccttttaagaagaggaaattttacggacaagaa
cactcaaaggctcgtgcactgaggaaagaccatggaacagcaagtgttgaaataaaaaag
acaaagtcagagtcatttggccagacagtccttcccacctggaaggctctgggacttgtc
ttatggaaggaggaaaatacttctcccaagtatgaagaaatcatccaaaatgcaaaggct
ccctggtcccgcagtagccggtcccctccaccttcagccaagggattccttaattcatca
accagtatttacagaggacttgccatgtgccaaatgctgtgtcgctgctggaaacacaac
aacgaagaggcatcaccttcaccccaaagagcttctgtctcccggcagatcctgatgctg
ctctttgtagactcagcctgggcctgggccttgccacccagctccccctccattgcctca
cagagactcattcagtga

>gi568815592f:135085900_135317977|GENSCAN_predicted_peptide_8|174_aa
MKPERALFAQRRGHVRTQQEGSHLQARKRGLTGNQSCWHLDLGTSSPQNCVKISFCSLSN
EVCGILCGTLNRLMKKCVRKYLQEAVKSQQQMLPSPTNISMNQMKCWKVPGTISNRAGVF
HLEEHVVEENGHWPENMEAMLLISSIILNELLIASRISISCRMKELIRITKDVL

>gi568815592f:135085900_135317977|GENSCAN_predicted_CDS_8|525_bp
atgaaaccagagcgtgctctttttgcacagagaagaggccatgtgaggacacaacaagaa
ggcagccacctccaagccaggaagagaggcctcacgggaaaccaatcctgctggcacctt
gatcttgggacttctagcccccagaactgtgtgaaaataagtttctgtagtttaagcaat
gaagtctgtggtattctctgtggcaccctgaatagactaatgaagaaatgtgtaagaaag
tatcttcaggaggcagtgaagagccagcaacaaatgctgccatcacccactaacatttca
atgaaccagatgaaatgctggaaggtacctggcacaattagcaacagagcaggtgtgttc
cacttggaagaacatgtggtggaggaaaatgggcactggcctgagaatatggaggccatg
ctcctaattagcagcatcattttaaacgaacttcttatagcttcccggatctcaatttcc
tgtagaatgaaggagttgatcagaatcaccaaggatgttctctaa