GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:22:17

Sequence gi568815595f:53078423_53292263 : 213841 bp : 50.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 PlyA -   3352   3347    6                               1.05
 1.14 Term -   6208   6143   66  1  0   98   42    41 0.015  -1.56
 1.13 Intr -  13839  13693  147  0  0  122   65    -5 0.603   1.03
 1.12 Intr -  14196  13947  250  2  1  129   78   172 0.914  17.74
 1.11 Intr -  21064  20959  106  2  1   73   94    56 0.980   3.97
 1.10 Intr -  25675  25531  145  1  1   90   92   189 0.999  19.36
 1.09 Intr -  27381  27251  131  1  2  109   95    32 0.996   6.41
 1.08 Intr -  28447  28397   51  2  0  122   90   -20 0.547   0.48
 1.07 Intr -  33486  33408   79  0  1  129  115   -31 0.910   2.82
 1.06 Intr -  35938  35729  210  1  0   55   29   132 0.544   3.11
 1.05 Intr -  43378  43277  102  1  0   88  110    14 0.893   3.97
 1.04 Intr -  44141  43952  190  1  1  105   86    21 0.949   3.19
 1.03 Intr -  45418  45302  117  0  0  110   92   103 0.998  12.48
 1.02 Intr -  47572  47487   86  1  2  106   97    31 0.753   4.42
 1.01 Init -  51978  51916   63  0  0   64   78   132 0.840   8.96
 1.00 Prom -  59679  59640   40                              -2.06

 2.00 Prom +  61371  61410   40                              -5.86
 2.01 Init +  63825  63940  116  2  2   51   77    83 0.354   1.99
 2.02 Intr +  65675  65740   66  2  0   97   89    44 0.544   3.42
 2.03 Intr +  71415  71644  230  0  2   49   81   101 0.085   3.01
 2.04 Intr +  78349  78533  185  2  2   23   94    61 0.104  -0.29
 2.05 Intr +  82914  83006   93  2  0   59  107    31 0.330   2.26
 2.06 Intr +  86682  86793  112  2  1  134   91    -2 0.273   4.65
 2.07 Intr +  87640  87700   61  2  1   59   65    46 0.073  -2.81
 2.08 Intr +  99982 100115  134  1  2   81   96   289 0.224  29.29
 2.09 Intr + 101155 101354  200  2  2  105   82   332 0.999  33.37
 2.10 Intr + 102785 102845   61  1  1   85   86    83 0.988   6.11
 2.11 Intr + 103022 103184  163  0  1   68   85   215 0.957  18.23
 2.12 Intr + 103279 103310   32  1  2  107   88    46 0.940   4.27
 2.13 Intr + 104515 104568   54  2  0  107   60    28 0.428   0.85
 2.14 Intr + 104699 104784   86  0  2   72   47   162 0.999  10.04
 2.15 Intr + 105030 105159  130  2  1   62  100   195 0.570  18.37
 2.16 Intr + 106452 106552  101  1  2  109   80   124 0.998  13.53
 2.17 Intr + 107182 107278   97  0  1  102   67    33 0.981   2.18
 2.18 Intr + 107505 107605  101  1  2   52  100   201 0.987  17.53
 2.19 Intr + 107745 107918  174  2  0  109   44   306 0.736  28.44
 2.20 Intr + 108182 108273   92  1  2  120   75   162 0.662  16.89
 2.21 Intr + 110298 110436  139  0  1  119   83   266 0.805  29.67
 2.22 Intr + 110636 110824  189  1  0  107   44   341 0.877  31.38
 2.23 Intr + 111451 111579  129  0  0   65   68    85 0.971   5.09
 2.24 Term + 113686 113844  159  0  0   82   51   286 0.994  22.24
 2.25 PlyA + 114197 114202    6                              -0.45

 3.03 PlyA - 114263 114258    6                               1.05
 3.02 Term - 114998 114995    4  1  1  142   48     0 0.014  -2.22
 3.01 Init - 120953 120832  122  2  2  103   27   133 0.169   6.36
 3.00 Prom - 143019 142980   40                              -1.96

 4.16 PlyA - 143042 143037    6                               1.05
 4.15 Term - 146554 146357  198  1  0  114   53    84 0.276   4.90
 4.14 Intr - 147509 147361  149  0  2  158   40   185 0.840  20.65
 4.13 Intr - 148456 148334  123  2  0  129  116   233 0.999  30.76
 4.12 Intr - 149727 149634   94  0  1  120  100   174 0.999  21.34
 4.11 Intr - 149937 149854   84  0  0   80   86   176 0.975  16.62
 4.10 Intr - 150715 150585  131  2  2   73  100   116 0.999  11.71
 4.09 Intr - 151014 150858  157  0  1  123  109   302 0.999  35.38
 4.08 Intr - 152199 152035  165  0  0   94   78   452 0.999  44.96
 4.07 Intr - 153128 152935  194  0  2   75   82   253 0.991  22.61
 4.06 Intr - 154852 154734  119  0  2   94   60   248 0.985  22.71
 4.05 Intr - 156752 156561  192  1  0   90   79   244 0.924  22.31
 4.04 Intr - 161926 161829   98  1  2   80   92   207 0.995  19.11
 4.03 Intr - 162823 162710  114  1  0  117  131   159 0.999  23.74
 4.02 Intr - 163820 163703  118  1  1   75  116   179 0.929  19.87
 4.01 Init - 177520 177414  107  1  2  108   92   147 0.946  16.79
 4.00 Prom - 191576 191537   40                              -4.86

 5.03 PlyA - 193209 193204    6                               1.05
 5.02 Term - 203032 202790  243  1  0   51   48   141 0.651   2.30
 5.01 Intr - 212434 212369   66  1  0   34  107    79 0.529   3.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 195381 195473   93  2  0   85   86    80 0.806   7.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:53078423_53292263|GENSCAN_predicted_peptide_1|580_aa
MGSQEVLGHAARLASSGLLLQVLFRLITFVLNAFILRFLSKEIVGVVNVRLTLLYSTTLF
LAREAFRRACLSGGTQRDWSQTLNLLWLTVPLGVFWSLFLGWIWLQLLEVPDPNVVPHYA
TGVVLFGLSAVVELLGEPFWVLAQAHMFVKLKVIAESLSVILKSVLTAFLVLWLPHWGLY
IFSLAQNFVFKELNHLPKSIHNLQANRHHESLMTSSSLRFLLKGDRSCFADPWEDHHSMA
RGEEQCEREKVLKPAVAFINWKEAKLTWSFFKQSFLKQILTEGERYVMTFLNVLNFGDQG
VYDIVNNLGSLVARLIFQPIEESFYIFFAKVLERGKDATLQKQEDVAVAAAVLESLLKLA
LLAGLTITVFGFAYSQLALDIYGGTMLSSGSGPVLLRSYCLYVLLLAINGVTECFTFAAM
SKEEVDRYNFVMLALSSSFLVLSYLLTRWCGSVGFILANCFNMGIRITQSLCFIHRYYRR
SPHRPLAGLHLSPVLLGTFALSGGVTAVSEASRAASSDNVTRECCQWGNNGPAVWLLCLL
SDLEAGTTAVFPGWSQRKECPITGWGLGTGSGAVIAVSEQ

>gi568815595f:53078423_53292263|GENSCAN_predicted_CDS_1|1743_bp
atgggcagccaggaggtgctgggccacgcggcccggctggcctcctccggtctcctcctg
caggtgttgtttcggttgatcacctttgtcttgaatgcatttattcttcgcttcctgtca
aaggaaatcgttggcgtagtaaatgtaagactaacgctgctttactcaaccaccctcttc
ctggccagagaggccttccgcagagcatgtctcagtgggggcacccagcgagactggagc
cagaccctcaacctgctgtggctaacagtccccctgggtgtgttttggtccttattcctg
ggctggatctggttgcagctgcttgaagtgcctgatcctaatgttgtccctcactatgca
actggagtggtgctgtttggtctctcggcagtggtggagcttctaggagagcccttttgg
gtcttggcacaagcacatatgtttgtgaagctcaaggtgattgcagagagcctgtcggta
attcttaagagcgttctgacagcttttctcgtgctgtggttgcctcactggggattgtac
attttctctttggcccagaactttgtctttaaagagctcaatcatcttcccaaatccatt
cacaacctgcaggcaaacaggcatcacgagagcctcatgacaagcagcagccttcgtttc
cttttaaaaggggacaggtcctgctttgctgacccctgggaggaccaccacagcatggca
aggggtgaggagcagtgtgagagagagaaggtgctgaagccggctgtggcgtttataaac
tggaaagaggctaaactgacttggagttttttcaaacagtctttcttgaaacagattttg
acagaaggcgagcgatatgtgatgacatttttgaatgtattgaactttggtgatcagggt
gtgtatgatatagtgaataatcttggctcccttgtggccagattaattttccagccaata
gaggaaagtttttatatattttttgctaaggtgctggagaggggaaaggatgccacactt
cagaagcaggaggacgttgctgtggctgctgcagtcttggagtccctgctcaagctggcc
ctgctggccggcctgaccatcactgtttttggctttgcctattctcagctggctctggat
atctacggagggaccatgcttagctcaggatccggtcctgttttgctgcgttcctactgt
ctctatgttctcctgcttgccatcaatggagtgacagagtgtttcacatttgctgccatg
agcaaagaggaggtcgacaggtacaattttgtgatgctggccctgtcctcctcattcctg
gtgttatcctatctcttgacccgttggtgtggcagcgtgggcttcatcttggccaactgc
tttaacatgggcattcggatcacgcagagcctttgcttcatccaccgctactaccgaagg
agcccccacaggcccctggctggcctgcacctatcgccagtcctgctcgggacatttgcc
ctcagtggtggggttactgctgtttcggaggcctctagggcagcatcttctgataatgtg
acaagagaatgttgccaatggggaaacaatggacctgcagtatggctgttatgcctttta
tctgacttagaagctggaaccacagctgtcttccctggctggtcccagaggaaggagtgc
cccatcacaggttggggccttggaacaggctcgggagctgtcatcgcagtcagtgagcag
tga

>gi568815595f:53078423_53292263|GENSCAN_predicted_peptide_2|967_aa
MPPFPKAVINISVLTAPTAPQEHLDLYMRDLILQENPPSVPICSVEELASLVQEGPGKRP
RDFQGRACQCSWVQGAPEVQANPMQLNFWPLLYGGWGLKKPRNMQSLRLLSAVSGHSDVN
TGNLVFTEYLLCTRPSQVSPSQPANLEQPPFSSGPPPTLFPMGQAGFGELSSEDVGDEGL
RGGSGELRHPQARERKERQSAPRRTPSARAGERRPRRCRRDPWRLPLQREVCRELARQGG
RPVSPGGWCVVAAAGARTKDKQELGAPGVLPEQTLTANPTGCYAPIGLPTAGPTMAPFLR
IAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG
RVIQIVLMRAAEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKVLMSVQYFLEDVD
CKQSMRSEDEAKFPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQG
YKCRRSSFEGWQEEDSSAGPLRECNAAIHKKCIDKIIGRCTGTAANSRDTIFQKERFNID
MPHRFKVHNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLA
EALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQDNSGTYGKIWEGSSKCNINN
FIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENP
FLTHLICTFQTKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATDLKLDNVLLDRDGHIKI
ADFGMCKENIFGESRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH
GDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIKIHPFFKTINWT
LLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPK
FEHLLED

>gi568815595f:53078423_53292263|GENSCAN_predicted_CDS_2|2904_bp
atgcctccctttccaaaggccgtgatcaacatcagtgtcctaacagcacccactgcgccc
caggagcatctggacctttacatgcgtgatctcattcttcaagagaaccctccaagtgtg
cctatttgctccgtggaggagttggccagcctggtccaagagggccctggaaaaagaccc
agagacttccagggcagggcctgccagtgctcctgggtgcagggagccccagaagtccag
gccaaccccatgcagcttaacttttggcccttgctatatggaggctgggggctgaagaag
ccaagaaacatgcagtcactaaggttgctgagtgctgtctctgggcacagcgatgtcaac
acaggaaacctggtcttcactgagtacctgctgtgtacccggccctcacaagtcagtcct
tcccagcctgccaacctcgagcagccgcctttcagctcagggccaccccctacactgttt
cccatgggccaagctgggtttggtgagctgtcctctgaggatgtgggggatgaggggctg
agaggtgggagcggggagctgaggcaccctcaggccagggagcgaaaggaaaggcagtca
gcgccgcgccgaaccccgtccgcgcgcgccggggagcggcgcccccgccgctgccgccgc
gacccttggcgcctgcccctgcaacgggaggtctgcagggaactggccaggcaagggggc
aggcccgtttctcctggtggttggtgcgttgtagcagcagcgggagccaggactaaggac
aagcaggagctgggagccccaggagtgctccctgagcagaccctcacagccaaccctact
ggctgttacgcacctataggtctccccactgcaggccccaccatggcgccgttcctgcgc
atcgccttcaactcctatgagctgggctccctgcaggccgaggacgaggcgaaccagccc
ttctgtgccgtgaagatgaaggaggcgctcagcacagagcgtgggaaaacactggtgcag
aagaagccgaccatgtatcctgagtggaagtcgacgttcgatgcccacatctatgagggg
cgcgtcatccagattgtgctaatgcgggcagcagaggagccagtgtctgaggtgaccgtg
ggtgtgtcggtgctggccgagcgctgcaagaagaacaatggcaaggctgagttctggctg
gacctgcagcctcaggccaaggtgttgatgtctgttcagtatttcctggaggacgtggat
tgcaaacagtctatgcgcagtgaggacgaggccaagttcccaacgatgaaccgccgcgga
gccatcaaacaggccaaaatccactacatcaagaaccatgagtttatcgccaccttcttt
gggcaacccaccttctgttctgtgtgcaaagactttgtctggggcctcaacaagcaaggc
tacaaatgcaggcgctcctccttcgagggctggcaggaggaagactcaagcgctgggcct
ctgcgggaatgtaacgctgccatccacaagaaatgcatcgacaagatcatcggcagatgc
actggcaccgcggccaacagccgggacactatattccagaaagaacgcttcaacatcgac
atgccgcaccgcttcaaggttcacaactacatgagccccaccttctgtgaccactgcggc
agcctgctctggggactggtgaagcagggattaaagtgtgaagactgcggcatgaatgtg
caccataaatgccgggagaaggtggccaacctctgcggcatcaaccagaagcttttggct
gaggccttgaaccaagtcacccagagagcctcccggagatcagactcagcctcctcagag
cctgttgggatatatcagggtttcgagaagaagaccggagttgctggggaggacatgcaa
gacaacagtgggacctacggcaagatctgggagggcagcagcaagtgcaacatcaacaac
ttcatcttccacaaggtcctgggcaaaggcagcttcgggaaggtgctgcttggagagctg
aagggcagaggagagtactttgccatcaaggccctcaagaaggatgtggtcctgatcgac
gacgacgtggagtgcaccatggttgagaagcgggtgctgacacttgccgcagagaatccc
tttctcacccacctcatctgcaccttccagaccaaggaccacctgttctttgtgatggag
ttcctcaacgggggggacctgatgtaccacatccaggacaaaggccgctttgaactctac
cgtgccacggacctcaaactggacaatgtgctgctggaccgggatggccacatcaagatt
gccgactttgggatgtgcaaagagaacatattcggggagagccgggccagcaccttctgc
ggcacccctgactatatcgcccctgagatcctacagggcctgaagtacacattctctgtg
gactggtggtctttcggggtccttctgtacgagatgctcattggccagtcccccttccat
ggtgatgatgaggatgaactcttcgagtccatccgtgtggacacgccacattatccccgc
tggatcaccaaggagtccaaggacatcctggagaagctctttgaaagggaaccaaccaag
aggctgggagtgaccggaaacatcaaaatccaccccttcttcaagaccataaactggact
ctgctggaaaagcggaggttggagccacctttcaggcccaaagtgaagtcacccagagac
tacagtaactttgaccaggagttcctgaacgagaaggcgcgcctctcctacagcgacaag
aacctcatcgactccatggaccagtctgcattcgctggcttctcctttgtgaaccccaaa
ttcgagcacctcctggaagattga

>gi568815595f:53078423_53292263|GENSCAN_predicted_peptide_3|41_aa
MPSHCPALEPGPHPRLGRLASTTHLLEDMNSKALGFGYLPP

>gi568815595f:53078423_53292263|GENSCAN_predicted_CDS_3|126_bp
atgcccagccactgccctgctcttgagccgggtccccaccctcggctggggcggctggcc
tccaccacccacctgctggaggacatgaactctaaggccttgggctttggttatctgcca
ccgtag

>gi568815595f:53078423_53292263|GENSCAN_predicted_peptide_4|680_aa
MESYHKPDQQKLQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKS
QDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFTDV
ATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVA
ILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAKHQPTAIIA
KTFKGRGITGVEDKESWHGKPLPKNMAEQIIQEIYSQIQSKKKILATPPQEDAPSVDIAN
IRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFI
ECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSHCGVS
IGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAII
YNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPL
DRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAE
LLKMFGIDRDAIAQAVTALTLLTTVDFSPCCSGSAGVSPAYKVNCAKPYTGQEQTSAGGG
GLGAPATGGVPRKSSELLRG

>gi568815595f:53078423_53292263|GENSCAN_predicted_CDS_4|2043_bp
atggagagctaccacaagcctgaccagcagaagctgcaggccttgaaggacacggccaac
cgcctacgtatcagctccatccaggccaccactgcggcgggctctggccaccccacgtca
tgctgcagcgccgcagagatcatggctgtcctctttttccacaccatgcgctacaagtcc
caggacccccggaatccgcacaatgaccgctttgtgctctccaagggccatgcagctccc
atcctctacgcggtctgggctgaagctggtttcctggccgaggcggagctgctgaacctg
aggaagatcagctccgacttggacgggcacccggtcccgaaacaagctttcaccgacgtg
gccactggctccctgggccagggcctcggggccgcttgtgggatggcctacaccggcaaa
tacttcgacaaggccagctaccgagtctattgcttgctgggagacggggagctgtcagag
ggctctgtatgggaggccatggccttcgccagcatctataagctggacaaccttgtggcc
attctagacatcaatcgcctgggccagagtgacccggccccactgcagcaccagatggac
atctaccagaagcggtgcgaggccttcggttggcatgccatcatcgtggatggacacagc
gtggaggagctgtgcaaggcctttggccaggccaagcaccagccaacagccatcattgcc
aagaccttcaagggccgagggatcacgggggtagaagataaggagtcttggcatgggaag
cccctccccaaaaacatggctgagcagatcatccaggagatctacagccagatccagagc
aaaaagaagatcctggcaacccctccacaggaggacgcaccctcagtggacattgccaac
atccgcatgcccagcctgcccagctacaaagttggggacaagatagccacccgcaaggcc
tacgggcaggcactggccaagctgggccatgccagtgaccgcatcatcgccctggatggg
gacaccaaaaattccaccttctcggagatcttcaaaaaggagcacccggaccgcttcatc
gagtgctacattgctgagcagaacatggtgagcatcgcggtgggctgtgccacccgcaac
aggacggtgcccttctgcagcacttttgcagccttcttcacgcgggcctttgaccagatt
cgcatggccgccatctccgagagcaacatcaacctctgcggctcccactgcggcgtttcc
atcggggaagacgggccctcccagatggccctagaagatctggctatgtttcggtcagtc
cccacatcaactgtcttttacccaagtgatggcgttgctacagagaaggcagtggaacta
gccgccaatacaaagggtatctgcttcatccggaccagccgcccagaaaatgccatcatc
tataacaacaatgaggacttccaggtcggacaagccaaggtggtcctgaagagcaaggat
gaccaggtgaccgttatcggggctggggtgaccctgcacgaggccttggccgctgccgaa
ctgctgaagaaagaaaagatcaacatccgcgtgctggaccccttcaccatcaagcccctg
gacagaaaactcattctcgacagcgctcgtgccaccaagggcaggatcctcaccgtggag
gaccattattatgaaggtggcattggtgaggctgtgtccagtgcagtagtgggcgagcct
ggcatcactgtcacccacctggcagttaaccgggtaccaagaagtgggaagccggctgag
ctgctgaagatgtttggtatcgacagggatgccattgcacaagctgtgactgccctcaca
ctgctgaccacagtggatttctccccctgctgctcgggctcagctggggtcagccctgct
tataaggtcaactgtgcaaaaccttatactggccaagaacaaactagtgctgggggagga
gggctgggtgccccggccactggtggagtccccaggaaatcctcagagctgttgcgagga
tga

>gi568815595f:53078423_53292263|GENSCAN_predicted_peptide_5|102_aa
SMQQNQDPEVFVQPKVLSSAIPKMEKALNLVEDMNRKRVLIDSMLHQKALSLYKDLKDLL
KWGHQAIYCKKGMVTQISGIQKVNSSLMLYHNAYAITSLLIM

>gi568815595f:53078423_53292263|GENSCAN_predicted_CDS_5|309_bp
tctatgcagcagaaccaggatcctgaagtatttgtgcagcctaaggtgttatccagtgcc
atcccgaagatggaaaaagcattaaatctcgtggaagacatgaacagaaaacgtgttctg
attgacagtatgttgcaccaaaaagcattgagcctatacaaagacctaaaagatctcttg
aaatggggacaccaagccatttactgcaagaaagggatggttacacagatttcaggaata
cagaaggtcaacagtagcctaatgctatatcacaatgcctacgccatcacctcacttctc
atcatgtag