GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:01:42

Sequence gi568815595r:125132344_125413640 : 281297 bp : 40.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9314   9678  365  1  2   60    5   338 0.211  17.27
 1.02 Intr +  14175  14297  123  0  0   72  100    44 0.093   2.78
 1.03 Intr +  15053  15152  100  2  1   22   85    70 0.045  -0.71
 1.04 Term +  15243  15410  168  2  0  130   51   136 0.905  11.00
 1.05 PlyA +  20205  20210    6                               1.05

 2.00 Prom +  20347  20386   40                              -7.45
 2.01 Init +  21803  22012  210  1  0   53   55   141 0.387   6.13
 2.02 Intr +  28225  28359  135  0  0   93   56    74 0.510   4.54
 2.03 Intr +  30081  30291  211  2  1   55   46   188 0.013   8.86
 2.04 Intr +  31751  31912  162  0  0   30   51   140 0.015   3.53
 2.05 Term +  33465  33586  122  1  2   45   34   101 0.003  -1.94
 2.06 PlyA +  34153  34158    6                               1.05

 3.10 PlyA -  34675  34670    6                               1.05
 3.09 Term -  36101  36045   57  2  0   67   38   102 0.353  -0.19
 3.08 Intr -  37569  37279  291  0  0   67   64   168 0.260   8.71
 3.07 Intr -  45296  45259   38  0  2   99   99    35 0.834   2.76
 3.06 Intr -  45712  45400  313  1  1   17  115   256 0.046  16.03
 3.05 Intr -  55085  54894  192  2  0   93   94   271 0.898  26.97
 3.04 Intr -  58178  58032  147  2  0  143   89    70 0.968  12.11
 3.03 Intr -  79125  78956  170  1  2    7   96   104 0.067   1.84
 3.02 Intr -  80241  80090  152  2  2   95   68    95 0.156   7.09
 3.01 Init -  82542  82436  107  0  2   40   48   142 0.117   5.14
 3.00 Prom -  85828  85789   40                              -6.15

 4.08 PlyA -  92419  92414    6                               1.05
 4.07 Term - 101596  99998 1599  1  0   27   42  1361 0.780 114.54
 4.06 Intr - 101986 101868  119  2  2   66  110    55 0.667   4.76
 4.05 Intr - 145466 145383   84  0  0   38  105    84 0.253   3.97
 4.04 Intr - 146904 146781  124  0  1   70   68    18 0.095  -2.76
 4.03 Intr - 155885 155760  126  2  0   78   69   164 0.899  13.46
 4.02 Intr - 160338 160117  222  0  0  103   88    64 0.130   5.30
 4.01 Init - 181297 180965  333  1  0   62   95   386 0.958  34.04
 4.00 Prom - 184300 184261   40                              -4.15

 5.00 Prom + 188276 188315   40                              -3.45
 5.01 Init + 213079 213219  141  0  0   55   52   107 0.382   3.98
 5.02 Intr + 224953 225018   66  0  0  140   48    30 0.001   2.38
 5.03 Intr + 226659 226817  159  2  0   71   50    99 0.004   3.66
 5.04 Term + 242963 243217  255  1  0  129   48   147 0.489   9.40
 5.05 PlyA + 246925 246930    6                               1.05

 6.05 PlyA - 247175 247170    6                               1.05
 6.04 Term - 264829 264747   83  2  2  110   41    90 0.918   3.38
 6.03 Intr - 265396 265207  190  1  1   31   99   128 0.888   6.44
 6.02 Intr - 268139 268002  138  2  0  103  100   113 0.979  13.74
 6.01 Intr - 270940 270846   95  2  2   96    7   116 0.834   3.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 138956 139108  153  1  0  124   47    97 0.888   6.14
S.002 Sngl + 178608 178829  222  2  0   93   49   189 0.944  10.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:125132344_125413640|GENSCAN_predicted_peptide_1|251_aa
MMLGLQAAGCGLRAAGCCRGGGFRRRSLLGPPPLDQRPTTSQTALSCEWTMGEAGATENS
QRGGRAPDGARRVGLGGRRKSGSARKGKGEAASGKGPARRRPKGVGGSGRPRRLREAPQQ
RNTLPRDPQRWHPASLLKAWAPPCRTDVGIEDKGGFLAKDGGSSERRKPEVAPSCASVCS
FASRCVPFLQALMESEVAAVTGVLDESSDHTSCPTSCLDSLGSVLMTDQPREHEGRARGG
ERMLLLLTERD

>gi568815595r:125132344_125413640|GENSCAN_predicted_CDS_1|756_bp
atgatgctggggctgcaggctgcgggctgcgggctgcgggctgcgggctgctgccgcggc
gggggcttccggcggcgctctcttctgggtcccccacccctggaccagcgaccgacgacc
agccagacagccctttcctgcgaatggacaatgggagaggctggcgcaaccgagaatagc
cagcgcggaggaagggctccggacggagctaggagggtggggctcggagggcgcaggaag
agcggctctgcgaggaaagggaaaggagaggccgcttctgggaagggacccgcacgacga
cgcccgaagggcgtcgggggaagtggtaggccccggagactgcgcgaggctcctcagcaa
aggaacaccctccccagggatcctcagagatggcaccctgcatccttgcttaaggcctgg
gctcctccctgccgtacagatgtgggaatagaggacaaagggggcttcctggccaaggat
ggtggaagctctgagaggagaaaaccagaagtggccccttcctgtgcctctgtgtgttcc
tttgcaagccgttgtgtgccttttctgcaggcgcttatggagagtgaggtggctgcagtc
actggggtgctggatgagtccagtgaccatacatcctgccctacatcctgcctggacagc
ctgggaagtgttttgatgactgatcaacccagagagcacgaggggagagcaagaggagga
gaaaggatgctgctgctcctgactgaacgtgattga

>gi568815595r:125132344_125413640|GENSCAN_predicted_peptide_2|279_aa
MLASSLPVQNTLTTVPFHFTSQQLRKLHFQCHALHGTYVSCLFSNSVSEEQAAPAAGNNV
SLMVKDMDPEPLPSLNQPLVANASLDEAGDAYNTLSLFTLRIKTWIPKSGKLSLLYQSHQ
QGPLDHVTRDKANGGWKQQERGADPPAPTPPPGFHPSLSTSEDFQIQIVFGLKNFLVTAK
WQAGHVLTRHERAQRRLAGSQTPLIRKEKGSSKEFTNFLQGHPRASGCQGAPGNHALESD
TVPGQLRGPESSQNIHVFPASRVEQPPGEILGVFLGKEY

>gi568815595r:125132344_125413640|GENSCAN_predicted_CDS_2|840_bp
atgctggcttcaagtctcccagtgcaaaatactttaactaccgtcccctttcacttcact
agtcagcagcttcgcaaactgcattttcaatgccatgccctacatgggacttatgtgtcc
tgcttgttttctaattcagtcagtgaagagcaggcggccccagcagctggaaacaatgtg
agcttgatggttaaggacatggaccctgagcctttgccatctctcaatcagccactggtt
gcaaatgcgagtttagatgaagcgggtgacgcttataacaccttaagtcttttcacactc
aggattaagacatggatccctaaaagtggcaaacttagcctgctgtatcaatcccatcag
cagggtcccttagatcacgtcaccagagacaaagccaacggagggtggaagcaacaggag
cgtggtgcagatccaccagccccaactccacctcctgggtttcatccctcccttagcacc
agcgaggacttccagattcagattgtttttggtcttaagaactttcttgtcacagccaag
tggcaggcgggacatgttttaaccaggcatgaacgggcccagcggagactggcaggttct
cagacccccttgatccgaaaggagaaaggaagcagtaaggagttcaccaacttcctccaa
gggcaccccagagccagcgggtgccagggggcaccagggaatcacgctttggagtcagac
acagtgccaggccagctgcgaggcccagagagcagccagaacatccatgtgttccctgca
tcccgagtggaacagccacctggggagattctgggtgtgtttctgggtaaagaatattga

>gi568815595r:125132344_125413640|GENSCAN_predicted_peptide_3|488_aa
MYDPPKVNKKNDSADHSDESVEIQSALHICGFDQGRWILSYRRSPARRHTGLAPVLGVRV
RVCVGCQGARVPAWPKREGRGSAEEPVERKDGQQGERRGEASLTKDAVTFQSSLPVQITR
IPACWRMTQMSQVQELFHEAAQQDALAQPQPWWKTQLFMWEPVLFGTWDGVFTSCMINIF
GVVLFLRTGWLVGNTGVLLGMFLVSFVILVALVTVLSGIGVGERSSIGSGGVYSMISSVL
GGQTGGTIGLLYVFGQGSQRWAVLPMGPWLSVLLTLLPGIACQCVAGAMYITGFAESISD
LLGLGNIWAVRGISVAVLLALLGINLAGVKWIIRLQLLLLFLLAVSTLDFVVGSFTHLDP
GFTYNWCELFLDQMLPAFSKCLVVAVHPLLVMRHHRADREFHPQPKWVAVVTGGHHSRVI
GGKLRCFIGSPPNVRFCRSFSGIVRILQRRILSSPARDMPGCISSGSRVELSYRQLLSDL
YLAVWAPS

>gi568815595r:125132344_125413640|GENSCAN_predicted_CDS_3|1467_bp
atgtatgacccaccaaaagtgaataagaaaaatgactctgctgatcattctgatgaatct
gtggaaatacagtcagcccttcatatctgtggatttgaccaaggcaggtggatcctctcc
taccgccggtcacccgcgcgccggcacacgggcctggccccagtacttggggtgcgggtc
cgcgtctgcgtggggtgccaaggggcccgggtcccagcgtggcccaaacgtgagggtagg
ggctccgcggaggagccagtagagagaaaggatggacaacaaggggagaggagaggagaa
gccagcctgaccaaggatgctgttaccttccagagcagtctccctgtccagatcaccagg
atccctgcttgctggagaatgacccagatgtcccaggtgcaggagctcttccatgaggca
gcccagcaggatgccctggcccagccccagccctggtggaagacccagctgttcatgtgg
gagcctgtgctgtttgggacctgggatggtgtgttcacatcctgcatgatcaacatcttt
ggggttgtgctcttcctgaggactggctggctggtgggaaacacaggagtgctcctgggc
atgttcctggtgtccttcgtcatcctggtggccctcgtcacggtgctgtctggcattggc
gtcggggagcgcagcagcatcggcagcggtggcgtctactccatgatctcctcggtcctg
ggtgggcagacgggaggcaccatcgggctgctctatgtgtttggacagggttctcagcgc
tgggcggttctgcccatgggcccatggctttctgtcctgctgactcttctacctggaatc
gcatgtcagtgtgttgcaggtgccatgtatatcaccggctttgctgaatccatctcggat
ttgctgggcctcgggaatatctgggctgtgcgaggaatttcagttgcggtgcttctggcc
ttgctgggcattaacctcgcaggtgtcaaatggataatccgcctccagctgctgttgctg
ttcctgctggccgtgtccacactggactttgtggtgggttctttcacccacctggaccca
ggctttacctacaattggtgtgagctgttcctggatcagatgctgccagctttctccaaa
tgtctggtagtcgctgtccatccattgttggtaatgaggcaccacagagctgatcgggag
ttccatccacaacccaagtgggtggcagttgtgacaggtgggcatcacagtagggtgatt
ggtggcaaactgcgttgtttcattggaagtcccccaaatgttcgtttctgcaggtctttc
tctggtatagttcgtattctccagagaagaattctctcatctcctgccagggacatgccc
ggctgcatcagttcggggagcagagtggagctctcatatcgccagctcctgtcggatctc
tacctggctgtctgggcaccatcttga

>gi568815595r:125132344_125413640|GENSCAN_predicted_peptide_4|868_aa
MNIDDKLEGLFLKCGGIDEMQSSRTMVVMGGVSGQSTVSGELQDSVLQDRSMPHQEILAA
DEVLQESEMRQQDMISHDELMVHEETVKNDEEQMETHERLPQGLQYALNVPSFLFYSPDF
KHKELRTTDVDLLKLLQNTGTYYWKDGSRRTAMKKRRELKLGDFMELGRLEFPSRIGMVS
TVSGKISVKQEITFTDVSEQLMRDKKQIREPVDLQKKKKRKQRSPAKILTINEDGSLGLK
TPKSHVCEHCNAAFRTNYHLQRHVFIHTGEKPFQCSQCDMRFIQKYLLQRHEKIHTGEKP
FRCDECGMRFIQKYHMERHKRTHSGEKPYQCEYCLQYFSRTDRVLKHKRMCHENHDKKLN
RCAIKGGLLTSEEDSGFSTSPKDNSLPKKKRQKTEKKSSGMDKESALDKSDLKKDKNDYL
PLYSSSTKVKDEYMVAEYAVEMPHSSVGGSHLEDASGEIHPPKLVLKKINSKRSLKQPLE
QNQTISPLSTYEESKVSKYAFELVDKQALLDSEGNADIDQVDNLQEGPSKPVHSSTNYDD
AMQFLKKKRYLQAASNNSREYALNVGTIASQPSVTQAAVASVIDESTTASILESQALNVE
IKSNHDKNVIPDEVLQTLLDHYSHKANGQHEISFSVADTEVTSSISINSSEVPEVTPSEN
VGSSSQASSSDKANMLQEYSKFLQQALDRTSQNDAYLNSPSLNFVTDNQTLPNQPAFSSI
DKQVYATMPINSFRSGMNSPLRTTPDKSHFGLIVGDSQHSFPFSGDETNHASATSTQDFL
DQVTSQKKAEAQPVHQAYQMSSFEQPFRAPYHGSRAGIATQFSTANGQVNLRGPGTSAEF
SEFPLVNVNDNRAGMTSSPDATTGQTFG

>gi568815595r:125132344_125413640|GENSCAN_predicted_CDS_4|2607_bp
atgaacattgacgacaaactggaaggattgtttcttaaatgtggcggcatagacgaaatg
cagtcttccaggacaatggttgtaatgggtggagtgtctggccagtctactgtgtctgga
gagctacaggattcagtacttcaagatcgaagtatgcctcaccaggagatccttgctgca
gatgaagtgttacaagaaagtgaaatgagacaacaggatatgatatcacatgatgaactc
atggtccatgaggagacagtgaaaaatgatgaagagcagatggaaacacatgaaagactt
cctcaaggactacagtatgcacttaatgtcccttctttccttttttattctcccgacttt
aaacataaagagttaagaaccactgatgtagatttactgaaactgttacaaaatacaggc
acatattactggaaggatggatccagaagaactgctatgaagaaaaggagagaacttaaa
ttaggtgattttatggaacttggaagactagaatttccaagtaggatagggatggtcagc
actgtttcaggtaagataagcgtaaagcaggaaattacttttactgatgtatctgagcaa
ctgatgagagacaaaaaacaaatcagagagccagtagacttacagaaaaagaagaagcgg
aaacaacgttctcccgcaaaaatccttacaataaatgaggatggatcacttggtttgaaa
acccctaaatctcacgtttgtgagcactgcaatgctgcctttagaacgaactatcactta
cagagacatgtcttcattcatacaggtgaaaaaccatttcaatgtagtcaatgtgacatg
cgtttcatacagaagtacctgcttcagagacatgagaagattcatactggtgaaaaacca
tttcgctgtgatgaatgtggtatgagattcatacaaaaatatcatatggaaaggcataag
agaactcatagtggagaaaaaccttaccagtgtgaatactgtttacagtatttttccaga
acagatcgtgtattgaaacataaacgtatgtgccatgaaaatcatgacaaaaaactaaat
agatgtgccatcaaaggtggccttctgacatctgaggaagattctggcttttctacatca
ccaaaagacaactcactgccaaaaaagaaaaggcagaaaacggagaaaaaatcatctgga
atggacaaagagagtgctttggacaaatctgacctgaaaaaagacaaaaatgattacttg
cctctttattcttcaagtactaaagtaaaagatgagtatatggttgcagaatatgctgtt
gaaatgccacattcgtcagttgggggctcgcatttagaagatgcgtcaggagaaatacac
ccacctaagttagttctcaaaaaaattaatagtaagagaagtctgaaacagccactggag
caaaatcaaacaatttcacctttatccacatatgaagagagcaaagtttcaaagtatgct
tttgaacttgtggataaacaggctttactggactcagaaggcaatgctgacattgatcag
gttgataatttgcaggaggggcccagtaaacctgtgcatagtagtactaattatgatgat
gccatgcagtttttgaagaagaagcggtatcttcaagcagcaagtaacaacagcagggaa
tatgcgctgaatgtgggtaccatagcttctcagccttctgtaacacaagcagctgtggca
agtgtcattgatgaaagtaccacggcatccatattagagtcacaggcactgaatgtggag
attaagagtaatcatgacaaaaatgttattccagatgaggtactgcagactctgttggat
cattattcccacaaagctaatggacagcatgagatatccttcagtgttgcagatactgaa
gtgacttctagcatatcaataaattcttcagaagtaccagaggtcaccccgtcagagaat
gttggatcaagctcccaagcatcctcatcagataaagccaacatgttgcaggaatactcc
aagtttctgcagcaggctttggacagaactagccaaaatgatgcctatttgaatagcccg
agccttaactttgtgactgataaccagaccctcccaaatcagccagcattctcttccata
gacaagcaggtctatgccaccatgcccatcaatagctttcgatcaggaatgaattctcca
ctaagaacaactccagataagtcccactttggactaatagttggtgattcacagcactca
tttcccttttcaggtgatgagacaaaccatgcttctgccacatcaacacaggactttctg
gatcaagtgacttctcagaagaaagctgaggcccagcctgtccaccaagcttaccaaatg
agctcctttgaacagcccttccgtgctccctatcatggatcaagagctggaatagctact
caatttagcactgccaatggacaggtgaaccttcggggaccagggacaagtgctgaattt
tcagaatttcccttggtgaatgtaaatgataatagagctgggatgacatcttcacctgat
gccacaactggccagacttttggctaa

>gi568815595r:125132344_125413640|GENSCAN_predicted_peptide_5|206_aa
MRKDVEPVIELPKETKKEQNEAKARRKELLKEEIKEENRENQLSKKFRGARAQTHARTHA
LTHKRKSWKILIIGLTHTIHPNIQNMLSLNKVQSEAHPKNNSRLNQAGLLHDGTAKFHEL
SKSSRDADMPQLERRRGRRHCRPGALWEAPHTGSAPRRPPSSGAETWLERHSVASIPAPA
CHQPRVAVEAGPEPQAPQAGPGRKAV

>gi568815595r:125132344_125413640|GENSCAN_predicted_CDS_5|621_bp
atgaggaaagatgtcgaaccagtaattgaattaccaaaagaaactaaaaaagagcaaaat
gaagccaaagcaagaaggaaggaattattaaaagaagaaataaaagaggaaaatagagaa
aatcaattaagcaaaaaatttaggggcgcacgcgcacagacacacgcacgcacgcacgca
cttacacacaaaaggaagtcatggaagatactcatcattggcctaacccacacaatccac
ccaaatattcagaatatgctctccctcaacaaggtccagtctgaggcacatcctaaaaac
aactctagactgaatcaggcagggctgctacatgatggtacagccaagtttcatgagttg
agcaaaagcagtagagacgcagacatgccgcagctagagcgccgccgcggtcgccgccac
tgccggcccggtgcattgtgggaagccccgcacacgggaagcgctccgcggcgcccgccc
tcgtctggcgcagagacctggctggaaagacacagcgtggcttcgattccggcgcctgcg
tgtcaccagcccagggtggccgtggaagctggacccgagccgcaggccccccaggctggg
cctgggaggaaagcggtttga

>gi568815595r:125132344_125413640|GENSCAN_predicted_peptide_6|168_aa
XSMCEDVCKAFRWYLSSSSKLWGNQNVDINLLSQGFRERSAEYRVWKETSSERFPRVADQ
RQLCPSEGEGYLESWHLKSNPYLQHKLLIACCNDHFLGPPVPAALDTVDSLPLPAALLIL
HNPIPFSGYPSAIPPLSMALFELISTTPGPVQRPEQYGLMAKSTDRPA

>gi568815595r:125132344_125413640|GENSCAN_predicted_CDS_6|507_bp
nggtcaatgtgtgaagatgtctgcaaggccttccgctggtatctgagttcttcttcgaag
ctctggggaaaccagaatgtggacataaatcttttaagtcagggctttagagaacgctct
gcagaataccgtgtctggaaagagacaagttcagagagatttccaagggtagcagaccag
aggcagctttgcccttcagaaggtgaaggctacttggagagctggcatctgaagagtaac
ccatatcttcaacataagcttctgattgcctgttgcaatgaccatttcttaggccctcct
gtccctgcagcactggacactgtggattcccttcctcttcctgctgctctcctgatattg
cataatccgattcccttcagtggctaccccagtgccatccctcctttatccatggccctc
tttgaacttattagcactactcctggaccagtgcaaagaccagagcagtatggcctgatg
gcaaagagcacagaccgccctgcttga