GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:41:28

Sequence gi568815582f:23086272_23315466 : 229195 bp : 44.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   7127   7166   40                              -1.86
 1.01 Init +  11781  12131  351  2  0   58   53   141 0.386   4.76
 1.02 Term +  12187  12894  708  0  0   75   47   179 0.988   6.01
 1.03 PlyA +  13420  13425    6                               1.05

 2.05 PlyA -  14159  14154    6                               1.05
 2.04 Term -  15393  15284  110  1  2   86   43    50 0.454  -1.03
 2.03 Intr -  16192  16048  145  1  1   91   94    91 0.990   9.86
 2.02 Intr -  21912  21775  138  0  0   40  116   113 0.917   9.96
 2.01 Init -  62999  62367  633  2  0   99  105   864 0.966  82.95
 2.00 Prom -  75875  75836   40                              -4.56

 3.00 Prom +  95138  95177   40                              -3.76
 3.01 Init +  95986  96187  202  0  1   48   98   151 0.088   9.57
 3.02 Intr +  99957 100317  361  1  1  123   71   517 0.111  47.78
 3.03 Intr + 103100 103400  301  2  1  131   99   296 0.970  31.74
 3.04 Intr + 106081 106271  191  0  2   89   71   290 0.999  25.78
 3.05 Intr + 107900 108003  104  2  2  126   91    75 0.999  11.42
 3.06 Intr + 110993 111156  164  0  2   78   99   157 0.983  15.49
 3.07 Intr + 123479 123577   99  1  0   73   92   135 0.999  12.71
 3.08 Intr + 125763 125880  118  2  1   86   64    90 0.574   6.44
 3.09 Intr + 126407 126503   97  0  1  112   64   121 0.816  11.17
 3.10 Intr + 126566 126623   58  2  1  110  107   -35 0.712  -0.51
 3.11 Intr + 126831 126892   62  2  2  101  108     9 0.652   1.73
 3.12 Intr + 128441 128516   76  2  1   74   65    60 0.907   1.82
 3.13 Term + 128818 129198  381  0  0   79   54   343 0.948  24.84
 3.14 PlyA + 129696 129701    6                               1.05

 4.00 Prom + 139398 139437   40                              -2.16
 4.01 Init + 140175 140312  138  2  0   65   84    95 0.767   6.94
 4.02 Term + 140559 140693  135  2  0   72   44    87 0.758   0.72
 4.03 PlyA + 142758 142763    6                               1.05

 5.00 Prom + 158175 158214   40                              -2.86
 5.01 Sngl + 158875 159165  291  0  0   76   42   141 0.752   3.95
 5.02 PlyA + 160997 161002    6                               1.05

 6.00 Prom + 168063 168102   40                              -2.86
 6.01 Init + 168499 168534   36  0  0   70   91    14 0.245   0.11
 6.02 Term + 177362 177427   66  1  0  102   38    94 0.765   3.74
 6.03 PlyA + 178067 178072    6                               1.05

 7.05 PlyA - 178447 178442    6                               1.05
 7.04 Term - 186579 186365  215  1  2   45   40   134 0.289   1.69
 7.03 Intr - 200333 200129  205  2  1   67  100    38 0.187   1.67
 7.02 Intr - 201363 201329   35  1  2  113   96   -23 0.021  -1.06
 7.01 Init - 226544 226502   43  2  1  105   78    18 0.228   3.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  71076  71120   45  2  0   69   64    59 0.857   2.28
S.002 Term +  74339  74470  132  1  0  119   42    56 0.872   2.19
S.003 Init + 100001 100317  317  1  2   91   71   511 0.886  46.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_1|352_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDAKDVFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIVKMAILPRNWK
KLLQSSYGTKKARITKTILSKKNKAGGITLPNFKLYYKATVTKTAWYWYQHRDIDQWNRT
EASEVTPHIYNHLIFDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLDLFLTPYTKINPR
WIKDLNLRPRTIKTLEENLGSIFRDIGMSKGFMTKTPKAKATKAKTDKWDLIKLKSFCTA
KETTIRVNRQPTEWEKIFAIYPSDKGLISRIYKELKRIYKKKTTPSKSGQRV

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_1|1059_bp
atgattgtatatctagaaaaccccatcgtctcagcccaaaatctccttaaactgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgcaaaggacgtcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaacattcca
tgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaggaattggaaa
aaactacttcaaagttcatatggaaccaaaaaagcccgcatcaccaagacaatcctaagc
aaaaagaacaaagctggaggcatcacgctacctaacttcaaactatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaacacagagatatagaccaatggaacagaaca
gaggcctcagaagtaacaccacacatctacaaccatctgatctttgacaaacctgacaaa
aacaagaaatggggaaaggattccctgtttaataaatggtgctgggaaaactggctagcc
atatgtagaaagctgaaactggatctcttccttacaccttatacaaaaattaatccaagg
tggattaaagacttaaatcttagacctagaaccataaaaaccctagaagaaaacctaggc
agtatctttagggacataggcatgagcaagggcttcatgactaaaacaccaaaagcaaag
gcaacaaaagccaaaacagacaaatgggatctaattaaactaaagagcttctgcacggca
aaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaatc
tatccatctgacaaagggctaatatccagaatctataaagaactcaaacgaatttacaag
aaaaaaacaaccccatcaaaaagtgggcaaagggtatga

>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_2|341_aa
MSKVTAPGSGPPAAASGKEKRSFSKRLFRSGRAGGGGAGGPGASGPAAPSSPSSPSSARS
VGSFMSRVLKTLSTLSHLSSEGAAPDRGGLRSCFPPGPAAAPTPPPCPPPPASPAPPACA
AEPVPGVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGA
QGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQEFLLWLLDRV
HEDLNHSVKQSGQPPLKIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEG
ILSQRVVINASVLPGNWLEMQILGPYSTPSKGETLVNKPFR

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_2|1026_bp
atgtccaaggtaacggcgcctgggtccgggccgccggcggcggcgagcgggaaggagaag
cgctccttcagcaagcggctgtttcggagcggccgcgctggcggcggcggcgcggggggc
cccggggcgtccgggccggccgcgccttcctcgccctcctcgccctcctctgcacgctcg
gtgggcagcttcatgagccgcgttctcaagacgctgtccacgctctcgcaccttagctct
gagggcgccgccccagaccgcggcggcctccgcagctgcttcccgcccgggccggccgcc
gcgcccacgccgccgccgtgcccgccgccgcccgcctctcccgcgccgcccgcttgcgcc
gccgagccggtgcccggcgtggcggggctccgcaaccacggcaacacgtgcttcatgaac
gccacgctgcagtgcctcagcaacaccgagctcttcgccgagtacctggcgctgggccag
taccgggcggggcggcccgagccctcgcctgacccggagcagcctgcgggccgcggcgcg
cagggccagggcgaggtcactgagcagctggcgcacctggtgcgggccctctggaccctg
gagtacaccccgcagcacagccgcgacttcaagactattgtgtcaaagaatgcactgcag
taccggggaaattcccaacatgatgcccaggagtttctgctgtggcttttggaccgagtt
catgaagacctcaaccattcagtgaagcagagtggccagcctcctctgaagattgtgtta
acagaaatgtactatgatgggttccatcgttccttttgtgatacagacgacctggaaaca
gtccatgaaagcgactgcatttttgcctttgagactcccgaaatatttaggcctgaagga
attctcagtcaaagagtggttattaatgcatcagtattacctgggaactggttagaaatg
caaattcttggtccctactccacaccgagtaaaggagaaactctggtaaacaagcccttt
aggtag

>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_3|737_aa
MSGLAEQPLLPTAGRWWALKLQVWRESEERGCVGLLLVLGQAPAIWTGVEGSRGAVIGGS
RRFEAPWARPSSESRPQSPILAMAPGEKIKAKIKKNLPVTGPQAPTIKELMRWYCLNTNT
HGCRRIVVSRGRLRRLLWIGFTLTAVALILWQCALLVFSFYTVSVSIKVHFRKLDFPAVT
ICNINPYKYSTVRHLLADLEQETREALKSLYGFPESRKRREAESWNSVSEGKQPRFSHRI
PLLIFDQDEKGKARDFFTGRKRKVGGSIIHKASNVMHIESKQVVGFQLCSNDTSDCATYT
FSSGINAIQEWYKLHYMNIMAQVPLEKKINMSYSAEELLVTCFFDGVSCDARNFTLFHHP
MHGNCYTFNNRENETILSTSMGGSEYGLQVILYINEEEYNPFLVSSTGAKVIIHRQDEYP
FVEDVGTEIETAMVTSIGMHLTESFKLSEPYSQCTEDGSDVPIRNIYNAAYSLQICLHSC
FQTKMVEKCGCAQYSQPLPPAANYCNYQQHPNWMYCYYQLHRAFVQEELGCQSVCKEACR
YVDPKGFKEWTLTTSLAQWPSVVSEKWLLPVLTWDQGRQVNKKLNKTDLAKLLIFYKDLN
QRSIMESPANSIEMLLSNFGGQLGLWMSCSVVCVIEIIEVFFIDFFSIIARRQWQKAKEW
WAWKQAPPCPEAPRSPQGQDNPALDIDDDLPTFNSALHLPPALGTQVPGTPPPKYNTLRL
ERAFSNQLTDTQMLDEL

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_3|2214_bp
atgagtggcctggctgaacagcccctgctgcctacagccggacgctggtgggcactgaag
ctgcaggtctggagggagtccgaggagcgaggctgcgtgggattactgctggtgctaggg
caggcacctgccatctggacgggagtggaaggaagtcgcggggcagtaatagggggcagc
aggcgctttgaggcgccttgggcacgcccgtcctcagagtcccgtcctcaaagtcccatc
ctcgccatggcacccggagagaagatcaaagccaaaatcaagaagaatctgcccgtgacg
ggccctcaggcgccgaccattaaagagctgatgcggtggtactgcctcaacaccaacacc
catggctgtcgccgcatcgtggtgtcccgcggccgtctgcgccgcctcctctggatcggg
ttcacactgactgccgtggccctcatcctctggcagtgcgccctcctcgtcttctccttc
tatactgtctcagtttccatcaaagtccacttccggaagctggattttcctgcagtcacc
atctgcaacatcaacccctacaagtacagcaccgttcgccaccttctagctgacttggaa
caggagaccagagaggccctgaagtccctgtatggctttccagagtcccggaagcgccga
gaggcggagtcctggaactccgtctcagagggaaagcagcctagattctcccaccggatt
ccgctgctgatctttgatcaggatgagaagggcaaggccagggacttcttcacagggagg
aagcggaaagtcggcggtagcatcattcacaaggcttcaaatgtcatgcacatcgagtcc
aagcaagtggtgggattccaactgtgctcaaatgacacctccgactgtgccacctacacc
ttcagctcgggaatcaatgccattcaggagtggtataagctacactacatgaacatcatg
gcacaggtgcctctggagaagaaaatcaacatgagctattctgctgaggagctgctggtg
acctgcttctttgatggagtgtcctgtgatgccaggaatttcacgcttttccaccacccg
atgcatgggaattgctatactttcaacaacagagaaaatgagaccattctcagcacctcc
atggggggcagcgaatatgggctgcaagtcattttgtacataaacgaagaggaatacaac
ccattcctcgtgtcctccactggagctaaggtgatcatccatcggcaggatgagtatccc
ttcgtcgaagatgtgggaacagagattgagacagcaatggtcacctctataggaatgcac
ctgacagagtccttcaagctgagtgagccctacagtcagtgcacggaggacgggagtgac
gtgccaatcaggaacatctacaacgctgcctactcgctccagatctgccttcattcatgc
ttccagacaaagatggtggagaaatgtgggtgtgcccagtacagccagcctctacctcct
gcagccaactactgcaactaccagcagcaccccaactggatgtattgttactaccaactg
catcgagcctttgtccaggaagagctgggctgccagtctgtgtgcaaggaagcctgcagg
tatgtggaccccaagggctttaaagagtggacactaaccacaagcctggcacaatggcca
tctgtggtttcggagaagtggttgctgcctgttctcacttgggaccaaggccggcaagta
aacaaaaagctcaacaagacagacttggccaaactcttgatattctacaaagacctgaac
cagagatccatcatggagagcccagccaacagtattgagatgcttctgtccaacttcggt
ggccagctgggcctgtggatgagctgctctgttgtctgcgtcatcgagatcatcgaggtc
ttcttcattgacttcttctctatcattgcccgccgccagtggcagaaagccaaggagtgg
tgggcctggaaacaggctcccccatgtccagaagctccccgtagcccacagggccaggac
aatccagccctggatatagacgatgacctacccactttcaactctgctttgcacctgcct
ccagccctaggaacccaagtgcccggcacaccgccccccaaatacaataccttgcgcttg
gagagggccttttccaaccagctcacagatacccagatgctggatgagctctga

>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_4|90_aa
MDTAHEIRRDYDGHGPASMHQGLYTEYERRERKRTGSELGMGPESRPSSFEAPSTNIPLL
SPLPTPPSIIQDRLHPPKTSAPAALFAPYI

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_4|273_bp
atggatacagctcatgaaataaggagagattatgatggccatgggccagccagcatgcac
cagggtctttacactgagtatgaaaggagggagagaaaaaggacaggatcagagcttggc
atggggcctgagtcgaggccttcctcctttgaagcccccagcaccaacataccacttctt
tcacccttgccaacaccacccagcatcatccaggaccgtttacatcccccgaagacttca
gcccctgctgccctgtttgctccttacatttag

>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_5|96_aa
MDAKLIGYSRGLHLFISQGISHDPPSLGQIGFLVTGLMEYPETPQLANHFQKECGLRTAV
WTHPVVPGWRPSSTLSLALRKCGSKRQGAAASRLGP

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_5|291_bp
atggatgcaaagctcatcggatactccaggggtcttcatctcttcatctcccaaggaatc
tcccatgatcctccatcccttgggcaaattgggttccttgtaactggcctgatggaatac
ccagaaacgcctcagttggccaaccattttcagaaagaatgtgggctccggaccgcagtc
tggactcacccagttgttccaggatggaggcccagctccactctctcccttgcccttagg
aagtgtggcagcaaacgacaaggggcagctgccagccggctgggaccttag

>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_6|33_aa
MQGRRWLTQFLQPSQCEDDKDEDLCDDPLPLNE

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_6|102_bp
atgcagggtagacgttggctgacacagttcctgcagccttctcaatgtgaagatgacaaa
gatgaagacctttgtgatgatccacttccacttaatgaataa

>gi568815582f:23086272_23315466|GENSCAN_predicted_peptide_7|165_aa
MAPLSIIWCQGIGGGGGSVGHPLGLQKLNLWFDQILATRYRQEFFLGGVISMLLHHTRKL
KMKGCLISEAKIDSWVQVVTTRSFHCEVVSSLRTKRKASGPKDMSTRKLLQHRLWQNAET
VTAHQYRVGERILVHPLCTIIRTTECYAATCYATTKCYAATTLLD

>gi568815582f:23086272_23315466|GENSCAN_predicted_CDS_7|498_bp
atggcgccactctctatcatctggtgccaagggatcgggggaggaggtggatctgtaggc
caccccctgggactacagaagctaaatctatggtttgatcagattttggctacacgttat
cggcaagaattcttcctgggtggtgttataagtatgctcttgcatcacaccagaaagctc
aaaatgaaaggctgtctcattagcgaagctaagattgattcatgggttcaggtggtgaca
accagatccttccattgtgaagtcgtttcttctctcagaaccaaaagaaaagcatcagga
cccaaagacatgagtaccaggaagttactgcagcatcgtttgtggcaaaatgcggaaaca
gtgactgcccatcaatacagagtgggagaacgcatactggtgcatccattatgcaccatt
attcgtaccacggaatgttatgctgccacgtgttatgctaccaccaaatgttatgctgcc
actacactgttggattag