GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:38:09

Sequence gi568815581r:31763362_32001627 : 238266 bp : 44.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2094   2247  154  2  1   70   12   110 0.188   1.74
 1.02 Intr +   4696   4853  158  2  2   66   66    56 0.148   0.93
 1.03 Term +  17353  17529  177  0  0   94   33   108 0.498   3.59
 1.04 PlyA +  18307  18312    6                               1.05

 2.00 Prom +  19480  19519   40                              -4.96
 2.01 Sngl +  20751  21563  813  2  0   43   43   243 0.947  11.08
 2.02 PlyA +  23194  23199    6                               1.05

 3.03 PlyA -  23601  23596    6                               1.05
 3.02 Term -  24009  23730  280  2  1   78   37   140 0.229   2.82
 3.01 Init -  30934  30918   17  1  2   75  115    -1 0.207   0.99
 3.00 Prom -  35721  35682   40                              -3.96

 4.03 PlyA -  35834  35829    6                               1.05
 4.02 Term -  39472  39220  253  0  1  116   44   199 0.970  13.41
 4.01 Init -  49601  49594    8  2  2  114   91     0 0.843   3.40
 4.00 Prom -  75522  75483   40                              -3.66

 5.19 PlyA -  75738  75733    6                               1.05
 5.18 Term -  88947  88778  170  1  2   83   48   194 0.999  12.94
 5.17 Intr -  89669  89451  219  0  0   70   78   199 0.914  15.37
 5.16 Intr -  95150  95119   32  1  2   86   97    45 0.753   2.97
 5.15 Intr -  95937  95453  485  0  2   73   51   118 0.050  -1.58
 5.14 Intr - 104751 104685   67  2  1   90  108    34 0.855   4.51
 5.13 Intr - 110126 110017  110  2  2   72   73    82 0.948   4.18
 5.12 Intr - 112052 111873  180  2  0   62   82   123 0.660   9.16
 5.11 Intr - 114966 114889   78  0  0   89   91    39 0.511   4.05
 5.10 Intr - 117393 117192  202  2  1   57   46    73 0.176  -0.71
 5.09 Intr - 121144 121063   82  2  1   82   80    71 0.429   4.40
 5.08 Intr - 122700 122619   82  0  1   38  100    61 0.931   1.51
 5.07 Intr - 123944 123875   70  1  1   12   79   111 0.382   1.78
 5.06 Intr - 126042 125924  119  0  2   75   81    84 0.382   5.66
 5.05 Intr - 129433 129386   48  1  0   91   92    12 0.613   0.78
 5.04 Intr - 131376 131284   93  0  0   96   87    51 0.965   5.96
 5.03 Intr - 131650 131609   42  1  0   75   98    35 0.756   1.64
 5.02 Intr - 136369 136285   85  0  1   66  108    59 0.998   5.52
 5.01 Init - 138266 138175   92  2  2   59   41   136 0.975   5.96
 5.00 Prom - 141625 141586   40                              -3.06

 6.00 Prom + 145413 145452   40                              -5.06
 6.01 Init + 173886 174159  274  2  1  105   70   248 0.160  19.87
 6.02 Intr + 213160 213253   94  2  1   30   95    50 0.031  -1.08
 6.03 Intr + 219638 219743  106  2  1   83   86    48 0.159   4.32
 6.04 Intr + 231203 231360  158  1  2   76   96   122 0.918  10.61
 6.05 Term + 235297 235642  346  1  1   79   48   119 0.567   0.97
 6.06 PlyA + 237418 237423    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:31763362_32001627|GENSCAN_predicted_peptide_1|162_aa
MEQANHPVGLDISVVYKDTLKKIVQQETSCPFTHVHYAEGITGRHTAPEDEGWLMTEEGK
ILIPEASQWKILKTLHQIFHMGIENTHQMAKSLFTGPNLQTIRQKEHQEAHYPGLPPLFV
SGLKAVNEKYSNKFWKAKEKPFFSKSCGLTYGQMAGMKFAET

>gi568815581r:31763362_32001627|GENSCAN_predicted_CDS_1|489_bp
atggagcaggccaatcacccagtggggcttgatatcagtgtggtttacaaggacacctta
aaaaagattgtccaacaagaaacaagctgccccttcacccatgtccactatgctgaggga
atcactggaaggcacactgccccagaggatgaagggtggttaatgacagaagaaggaaag
atacttatacctgaagccagccagtggaaaatacttaaaacgctccaccaaatttttcat
atgggtattgaaaacactcatcaaatggccaaatccctgtttacagggccaaatctccag
accatccgacagaaggaacaccaagaagcacattacccaggacttcctcctttgtttgtt
tctgggttaaaggctgttaatgagaagtattcaaacaagttttggaaggcaaaagagaag
ccatttttctccaaaagttgtgggctgacttatgggcagatggcgggcatgaagtttgca
gaaacttag

>gi568815581r:31763362_32001627|GENSCAN_predicted_peptide_2|270_aa
MNIDAKILNKILANQIQQHIKKLIHHDQVGFIPGMQGWFNIHKSINVIQHINRTKDKNHM
IISVDAEKAFDKVQQHFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGLKLEAFPLKT
GTRQGCPLSLLLFNIVLEVLARAIRQEKEINCIQLGKEEVKLPLFADDMIVYLENPVVSA
PNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLNEIKEDTNKCKNIPCS

>gi568815581r:31763362_32001627|GENSCAN_predicted_CDS_2|813_bp
atgaacatcgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atacacaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatg
attatctcagtagatgcagaaaaggcctttgacaaagttcaacaacacttcatgctaaaa
actctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatgggctaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcacttctcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaggagaaggaaataaattgtattcaattaggaaaagaggaagtt
aaattgcccctgtttgcagatgacatgattgtatatctggaaaaccccgtcgtctcagcc
ccaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaacgtg
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggat
acaaacaaatgcaagaacattccatgctcatag

>gi568815581r:31763362_32001627|GENSCAN_predicted_peptide_3|98_aa
MGACGRQLGGSKELKQVKHCETGTLNEYWLLSSSSSSSSSSSSSSSLLLLLLQDTYMTWD
NCYIYRSSPRIKCFFVLEALGQFDNNGLCIFKYEKYLE

>gi568815581r:31763362_32001627|GENSCAN_predicted_CDS_3|297_bp
atgggtgcatgtggaaggcagttaggaggatcaaaggagttgaaacaagtaaaacactgt
gagaccggcacactcaatgaatattggctcttatcatcatcatcatcatcatcatcatca
tcatcatcatcatcatcattattactattacttctccaagacacttacatgacttgggat
aattgttacatttatagaagcagccccaggattaaatgcttcttcgtcttggaagccttg
ggccaatttgataacaacgggctttgtattttcaaatatgagaaatatctagaataa

>gi568815581r:31763362_32001627|GENSCAN_predicted_peptide_4|86_aa
MPREVPLMSYEEVRTQVPSLPWVWDIDLGQAPPIRCVHTDTGSSGSPREKQAVAGAAMFA
GVDGNKGAQLLVVTAGGSKFMFLVLT

>gi568815581r:31763362_32001627|GENSCAN_predicted_CDS_4|261_bp
atgcccagggaagttcctcttatgtcttatgaggaagtcagaactcaagttcccagcctg
ccctgggtctgggacatagacctgggccaggctccaccaatcagatgcgtccatactgac
actggttcaagtgggagccccagggagaaacaggctgtggctggagcagccatgtttgct
ggtgtggatggcaacaagggtgcccagcttttggtggtgactgccggtggtagcaagttc
atgttcctggtgctgacatga

>gi568815581r:31763362_32001627|GENSCAN_predicted_peptide_5|751_aa
MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQY
EINLLELIQRRRTRIGYSFKKDEIENSIVHRVQGVFQRASAKWKDDVQLWLSYVAFCKKW
LCGLWQPNGKWKIDCLQKAQGNYFFAHCAFIQSAQNFIKKMELMHAEKLRKEKEEFEKAS
MDVENPDYSEEILKGELAWIIYKNSVSIIKGAEFHVSLLSIAQLFDFAKDLQKEIYDDLQ
ALHTDDPLTWDYVARRELEIESQTEEQPTTKQAKAVEVGRKEERCCAVYEEAVKTLPTGE
LHQTMRLERTMTVFRKAHELKLLSECQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGT
MWQLKLQVLIESKSPDIAMLFEEAFVHLKPQKALLAVIGADSVTLKNKYLDWAYRSGGYK
KARAVFKSLQESRPFSVDFFRKMIQFEKEQADWRFCGGSSGGQPGRRVTWPTASRATSRG
PQGMDLQAAGAQAQGAAEPSRGPPLPSARGAPPSPEVSAAWGPGATASRSLGREVAGPGW
AGAAGPGKRLWPASGRPATRSAVWARARAENGQAAGPRGCGAGKAEGVGGRSGSAETAVR
PLGAAADLVNGSLYRLGAERLEARGTQSIPNDSPARGEGTHSEEEGFAMDEEDSDGELNT
WELSEGTNCPPKEQPGDLFNEDWDSELKADQGNPYDADDIQESISQELKPWVCCAPQGDM
IYDPSWHHPPPLIPYYSKMVFETGQFDDAED

>gi568815581r:31763362_32001627|GENSCAN_predicted_CDS_5|2256_bp
atggcagagataattcaggaacgcatagaagatcggctcccggaattggaacagctggag
cgcattggactgttcagtcatgcggagattaaggctatcattaagaaggcttccgatcta
gagtacaaaatccagagaagaacccttttcaaggaagactttatcaattatgttcaatat
gaaattaatcttttggagctgatccagagaagaagaacacgcattggatattcatttaag
aaggatgagattgagaattctattgtacaccgggtacaaggtgttttccagcgtgcctca
gcaaaatggaaagacgatgttcaactttggctctcctatgtggctttttgtaagaagtgg
ctttgtggattatggcagccaaatgggaaatggaagatcgattgtcttcagaaagcgcaa
ggcaactatttcttcgcgcactgcgctttcatccagagtgcccaaaactttataaagaag
atggagctgatgcatgctgaaaaactgaggaaggagaaggaagaatttgaaaaagccagt
atggatgtggagaatcctgattattctgaagaaatccttaagggcgagttggcatggatc
atctacaaaaattctgtaagcataattaaaggtgcagaatttcacgtgtcactgctttcg
attgcacagctatttgactttgccaaagatctacaaaaagagatttatgatgaccttcag
gctctacacacagatgatcctctcacttgggattatgtggcaaggcgagaattagagatt
gagtcacagacagaagagcagcctacaacgaaacaagccaaagcagtggaggtcggccgg
aaggaggagaggtgctgtgctgtgtatgaagaggcagtgaagactctgccaacaggtgaa
cttcaccaaaccatgaggttggaaagaaccatgactgtattcaggaaggcacatgaactg
aagcttctgtcagaatgccaatacaagcagttgagtgtttcgttgctgtgttataacttc
ctgagggaagctctggaagtggcagtagctggaactgaattgtttagagactctgggaca
atgtggcagctgaagctgcaggtgctgatcgagtcaaagagccctgacatagccatgctt
tttgaagaagcctttgtgcacctgaaaccccagaaagctctcttagctgtcataggtgcc
gactcagtaaccctgaagaataagtacctggattgggcttatcgaagtggtggctacaaa
aaggccagagctgtgtttaaaagtttacaggagagccgaccattttcagttgactttttc
aggaaaatgattcagtttgaaaaggagcaagctgattggcgcttctgcggcggatcctcg
ggcgggcagccgggccggcgcgtcacgtggcccacggcgtccagggcgaccagccgcggg
ccgcagggcatggaccttcaggccgccggggcccaggcgcagggggccgcggagccgtct
cggggcccgccgctgcctagcgcgcggggggcgccccccagcccggaggtgagcgccgcg
tgggggccaggagcaacagccagccgcagcctggggcgggaagtcgcggggccgggctgg
gcgggggccgcggggccggggaagcgcctctggccggcctcgggccgccccgcgacacgg
agcgctgtttgggctcgcgctcgagctgaaaacggccaggccgcggggccgcggggctgc
ggggcggggaaagccgagggcgtgggtgggcgctctgggtcagcagagacggctgtccgc
ccgctgggcgccgctgcggatttggtaaatgggagtctgtaccggctaggtgctgagcgg
cttgaagcccgtggaacacagagcattcctaatgacagtcctgcccggggtgagggcacc
cattctgaagaggaaggctttgccatggatgaggaggactctgatggagaactgaatacc
tgggagctgtcagaagggacaaactgtccacccaaggaacagcctggcgatctttttaat
gaggactgggactcggagttgaaagcagatcaagggaatccatatgatgctgacgacatc
caggagagcatttctcaagagcttaaaccttgggtgtgctgtgccccacaaggagacatg
atctatgaccccagctggcaccatccgcctccactgataccctattattccaagatggtc
tttgaaacaggacagtttgacgatgctgaagattga

>gi568815581r:31763362_32001627|GENSCAN_predicted_peptide_6|325_aa
MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA
AAAAGAAVLPVKKPKMEHVQADHELFLQAFENVNEELPARRKRNREDGEKTFVAQMTVFD
KNRRLQLLDGEYEVAMQEMEECPISKKRATWETILDGKYHPKGARIDVSINECYDGSYAG
NPQDIHRQPGFAFSRNGPVKRTPITHILVCRFIADNQMNHACMLFVENYGQKIIKKNLCR
NFMLHLVSMHDFNLISIMSIDKAVTKLREMQQKLEKGESASPANEEITEEQNGTANGFSE
INSKEKALETDSVSGVSKQSKKQKL

>gi568815581r:31763362_32001627|GENSCAN_predicted_CDS_6|978_bp
atggcgcctcagaagcacggcggtgggggagggggcggctcggggcccagcgcggggtcc
gggggaggcggcttcgggggttcggcggcggtggcggcggcgacggcttcgggcggcaaa
tccggcggcgggagctgtggagggggtggcagttactcggcctcctcctcctcctccgcg
gcggcagcggcgggggctgcggtgttaccggtgaagaagccgaaaatggagcacgtccag
gctgaccacgagcttttcctccaggcctttgagaatgtcaatgaagagcttccagccaga
agaaaacgaaatcgtgaggatggggaaaagacatttgttgcacaaatgacagtatttgat
aaaaacaggcgcttacagcttttagatggggaatatgaagtagccatgcaggaaatggaa
gaatgtccaataagcaagaaaagagcaacatgggagactattcttgatgggaagtatcat
ccaaaaggtgctaggatagatgtttctatcaatgagtgttatgatggctcctatgcagga
aatcctcaggatattcatcgccaacctggatttgcttttagtcgcaacggaccagttaag
agaacacctatcacacatattcttgtgtgcaggtttattgctgacaatcaaatgaatcat
gcctgtatgctgtttgtagaaaattatggacagaaaataattaagaagaatttatgtcga
aacttcatgcttcatctagtcagcatgcatgactttaatcttattagcataatgtcaata
gataaagctgttaccaagctccgtgaaatgcagcaaaaattagaaaagggggaatctgct
tcccctgcaaacgaagaaataactgaagaacaaaatgggacagcaaatggatttagtgaa
attaactcaaaagagaaagctttggaaacagatagtgtctcaggggtttcaaaacagagc
aaaaaacaaaaactctga