GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:35:26

Sequence gi568815592f:157767545_158042835 : 275291 bp : 44.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     71     66    6                               1.05
 1.02 Term -   1906   1614  293  2  2  111   48   152 0.300   9.01
 1.01 Init -   7192   7144   49  1  1   66   78    47 0.231   2.61
 1.00 Prom -   9938   9899   40                              -3.56

 2.04 PlyA -  10319  10314    6                               1.05
 2.03 Term -  23321  23192  130  1  1   79   51   100 0.037   3.05
 2.02 Intr -  49589  49466  124  0  1   68   44   124 0.036   5.64
 2.01 Init -  55422  55359   64  0  1   89   20    92 0.102   1.81
 2.00 Prom -  60800  60761   40                              -1.46

 3.00 Prom +  62238  62277   40                              -1.96
 3.01 Init +  65103  65238  136  2  1   90   51    78 0.234   4.60
 3.02 Intr +  95508  95725  218  1  2   88   87    11 0.038  -0.78
 3.03 Intr + 100003 100089   87  0  0   88  111   106 0.920  13.07
 3.04 Intr + 107507 107632  126  1  0   89   98    65 0.469   8.48
 3.05 Intr + 129283 129454  172  0  1   67   94    47 0.815   2.72
 3.06 Intr + 134354 134501  148  0  1  105  108   150 0.960  17.99
 3.07 Intr + 138584 138668   85  2  1   35   87    69 0.894   1.32
 3.08 Intr + 142121 142246  126  1  0    8   93    93 0.781   2.68
 3.09 Intr + 142364 142481  118  1  1  120  109    25 0.984   7.84
 3.10 Intr + 153987 154117  131  1  2   95   97    99 0.980  11.91
 3.11 Intr + 159567 159670  104  2  2   93   45    43 0.929  -0.53
 3.12 Intr + 161055 161158  104  0  2  101   97   227 0.997  24.72
 3.13 Intr + 164651 164728   78  0  0  101  100    49 0.935   6.92
 3.14 Intr + 168420 168496   77  1  2   80   79    97 0.994   7.23
 3.15 Intr + 171089 171203  115  1  1   72  116   120 0.999  13.22
 3.16 Intr + 173339 173430   92  0  2   62  113    86 0.987   8.21
 3.17 Intr + 175776 175909  134  2  2   55   80    70 0.219   2.34
 3.18 Intr + 213476 213573   98  2  2  105   60     9 0.133  -0.55
 3.19 Intr + 214404 214544  141  1  0   56   92   235 0.274  21.02
 3.20 Intr + 249660 249746   87  1  0   98  105   121 0.987  14.74
 3.21 Intr + 251359 251415   57  2  0   80   56    60 0.098   0.86
 3.22 Intr + 261212 261482  271  0  1  138   81   212 0.210  22.10
 3.23 Intr + 265911 266136  226  0  1   45  109   363 0.052  32.09
 3.24 Intr + 270969 271140  172  2  1   57   94    82 0.868   5.22
 3.25 Term + 272317 272435  119  2  2   90   45    86 0.985   3.20
 3.26 PlyA + 272990 272995    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 251359 251465  107  2  2   80   41   105 0.822   3.57
S.002 Init + 265786 266136  351  0  0   74  109   414 0.886  39.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:157767545_158042835|GENSCAN_predicted_peptide_1|113_aa
MSSEESRKHSRCEGFGDQEKSPGCPRPSVLFLLVQLSVFPVHEDGGACACIRVELCKNLL
IVGRIDARLSGEFSVTHRENCCHLAMREMQCLLLLLLLLHGRPEEHPWSWWLC

>gi568815592f:157767545_158042835|GENSCAN_predicted_CDS_1|342_bp
atgagcagcgaagagagcagaaagcacagcagatgtgaaggcttcggagaccaggagaaa
tcccctggctgcccacgccccagcgtgctcttcctgctggtacagctcagtgtatttcct
gtccacgaagatgggggtgcctgcgcctgcatcagagtagaactctgcaaaaatttgttg
attgttggtcggatcgatgccaggctctctggtgaattcagtgtcacacacagagagaac
tgctgtcacttagcaatgagggaaatgcagtgcctgctgttgctgctgctgttgctgcat
gggaggcccgaggagcatccttggagctggtggctctgctga

>gi568815592f:157767545_158042835|GENSCAN_predicted_peptide_2|105_aa
MARNPAWPPQGKRSAAHRAARVLEAEKSNIKAPADSVSGECPLVHGQPSSRYVLTWWKGE
QARERTENQKDKGVSSQNPTPNFWKTTQEQNEREGKAVWDARTIG

>gi568815592f:157767545_158042835|GENSCAN_predicted_CDS_2|318_bp
atggcccgcaaccctgcgtggccgccccaggggaagcgatccgcggcccacagagccgct
cgggttctggaggctgaaaagtccaacatcaaggcaccagcagattcagtgtctggtgag
tgccccctggttcatggacagccatcttctcgctatgtcctcacatggtggaagggtgaa
caagcgcgggagagaacagagaaccagaaagacaaaggagtttcctcccagaaccctaca
cccaacttctggaagacaacacaagagcagaatgagagggagggcaaagctgtgtgggat
gcaaggacaattggctga

>gi568815592f:157767545_158042835|GENSCAN_predicted_peptide_3|1073_aa
MSFFTWQQEEVPSKRGKTLIKPSDLVRIHENSMGVTAPMIQLPPPDRLSPHLSQLAIDSN
TREKEHCPQLPYQRALRKNSDYPVSKRKGCGADRITDMYNIGQIECVWSYSSLFSEEEAR
VMYDFAAEPGNNELTVNEGEIITITNPILPSDGKDQFSCGNSVADQAFLDSLSASTAQAS
SSAASNNHQVGSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTAFGHP
QAYQGPATGDDDDWDEDWDGPKSSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGF
AKPGTEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIE
YQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERL
QAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLD
LVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSS
SGYQGETDLNDAITEAGKTYEEIASLVAEQGAIEKVKESDKLVATSKITLQDKQNMVKRV
SIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETSSGAPVIEGSRYAFHCHSYSS
SAYTSRGRTLGAPGAASAIVVCGSSDRPSLGARTPRQKAGPHTPAYTRGHVPVSRAVGPT
LMALSKGLRLLGRLGAEGDCSVLLEARGRDDCLLFEAGTVATLAPEEKEVIKGQYGKLTD
AYGCLGELRLKSAIFLKLQEIPVALAFHGDDRGTSLSFLVLVTGCTSVGRIPDAEIYKIT
ATDFYPLQEEAKEEERLIALKKILSSGVFYFSWPNDGSRFDLTVRTQKQGDDSSEWGNSF
FWNQLLHVPLRQHQVSCCDWLLKIICGVVTIRTVYASHKQAKACLVSRVSCERTGTRFHT
RGVNDDGHVSNFVETEQAVLMSLEVPGLAHPSETPDSLATQEGELSLPSAESRAVHVGLQ
QSLTEPARSQALLPGHTGLGPLQRKQDPPARPADHLEVERAHRRLCGHRLANK

>gi568815592f:157767545_158042835|GENSCAN_predicted_CDS_3|3222_bp
atgtccttcttcacatggcagcaggaagaagtgccgagcaaaagggggaaaacccttata
aaaccatcagatcttgtgagaattcatgagaacagcatgggggtaactgcccccatgatt
caattacccccaccagacagactttctccacacctcagccagttagccattgacagcaat
accagagagaaggagcactgtccccaactcccataccaaagagctctgagaaagaattct
gattatccagtttccaaaaggaagggatgtggggcagacagaataacagatatgtacaac
ataggtcagatagaatgtgtatggtcatactcctctcttttctcagaagaggaggctcgg
gttatgtatgattttgctgctgaacctggaaataatgaactgacggttaatgaaggagaa
atcatcacaatcacaaatccgattttacccagtgatggaaaagatcaattttcttgtgga
aattcagtggctgaccaagccttccttgattctctctcagccagcacagctcaggccagt
tcgtcggctgccagcaacaatcaccaggttggcagtggcaatgacccctggtcagcctgg
agtgcctccaaatctgggaactgggaaagctcagaaggctggggggcccagccagagggg
gctggagcccaaagaaacacaaacactcccaacaactgggacactgccttcggccacccc
caggcctaccaaggaccagcaactggtgatgatgatgactgggatgaagactgggatggg
cccaaatcctcttcctactttaaggattcagagtcagctgatgcaggcggcgctcagcga
ggaaacagtcgtgctagttcctcatccatgaaaattccccttaacaaatttcctggattt
gcgaaacctggcacggaacagtatttgttggccaaacaactagcaaaacccaaagagaaa
attcccatcattgttggagattatggcccaatgtgggtttatcctacctctacttttgac
tgtgtggtagcagatcccaggaaaggctccaaaatgtatggtctaaagagctacatcgaa
tatcagctaacacctactaacactaatcgatctgtaaaccacaggtataagcactttgac
tggttatatgagcgtctcctggttaagtttgggtcagccattccaatcccttctcttcca
gacaaacaagtcacaggccgctttgaagaggaatttatcaaaatgcgcatggagagactt
caggcctggatgaccaggatgtgtcgccatccagtaatctcagaaagtgaagttttccag
cagttcctaaatttccgagatgagaaggaatggaaaactggaaagaggaaggccgagaga
gatgagctggcgggagtcatgatattttccaccatggaaccagaggcacctgacttggac
ttagtagaaatagagcagaagtgcgaggctgtggggaagttcaccaaggccatggatgac
ggcgtgaaggagctgctgacggtggggcaggagcactggaagcgctgcacgggcccatta
cccaaggaatatcagaagataggaaaggccttgcagagtttggccacagtgttcagttcc
agtggctatcaaggtgaaacagatctcaatgatgcaataacagaagcaggaaagacttat
gaagaaattgccagtctcgtggcagaacagggagcaatagaaaaagtgaaagaaagtgac
aaactagttgcaacaagtaaaatcaccctacaagacaaacagaacatggtgaagagagtc
agcatcatgtcttacgcgttgcaagctgagatgaatcactttcacagtaaccggatctat
gattacaacagtgtcatccgcctgtacctggagcagcaagtgcaattttacgaaacgtcc
tctggggctcctgtcattgagggaagtcgttacgcctttcactgccacagttacagctca
agtgcttacacttcaagagggaggacgctgggggcccctggggctgctagtgccatcgtg
gtgtgtggcagctctgacaggccaagcctgggcgctagaaccccgcgccagaaggccggg
ccacacactccagcgtacacgcgcggacacgtgccggtgtccagagccgtgggcccgacc
ctcatggccctgagcaaagggctgcggctgctggggcgcctgggggccgagggggactgt
agcgtgctgctggaggcgcgcggccgcgacgactgcctgctgttcgaggccggcacggtg
gccacgctggctccagaagaaaaggaagtcattaaaggacagtatggcaagctcacggac
gcgtacggctgcctgggggagctgaggctgaaatctgcgatcttcctgaagttgcaggaa
atccctgtggcccttgccttccatggtgatgaccgtggcacgtctctgagcttcctggtg
ttggtgacaggctgcacatctgtgggcagaattccagatgctgaaatctacaaaatcact
gccactgacttttaccctcttcaggaagaggccaaggaggaggaacgcctcatagctttg
aagaaaatcctcagctcgggggtgttctatttctcatggccaaacgatgggtctcgcttt
gacctgactgtccgcacgcagaagcagggggatgacagctctgaatgggggaactccttc
ttctggaaccagctgttgcacgtgcccttgaggcagcaccaggtgagctgctgtgactgg
ctgctgaagatcatctgcggggtggtcaccatccgcaccgtgtatgcctcccacaagcag
gccaaggcctgcctcgtctctcgcgttagctgtgagcgcacaggcactcgcttccacacc
cgtggcgtgaacgacgacggccatgtgtccaacttcgtggagacagagcaggctgtgctg
atgagcctggaggtgcctgggctggcccatccatcggagaccccggacagcctggctacc
caggaaggggagctgtcacttcccagcgctgagtccagggctgtccacgtgggccttcag
caaagcctgactgagcctgccaggtcccaggctctgctcccaggtcacactggcctgggg
cccctgcagaggaaacaggatccaccagccaggcccgctgaccatttggaagtggagcgt
gcacacaggcggctgtgcggtcatcgtctggcaaacaaatga