GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:19:23

Sequence gi568815578r:49536315_49813634 : 277320 bp : 46.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -    556    489   68  2  2   96   77    17 0.144   0.02
 1.05 Intr -   3407   3256  152  1  2  117   94   222 0.943  25.51
 1.04 Intr -   8134   7991  144  0  0   93   94   101 0.722  10.60
 1.03 Intr -  11705  11527  179  2  2   92   74   196 0.996  17.32
 1.02 Intr -  13875  13752  124  2  1   53   93   119 0.855   9.49
 1.01 Init -  31802  31729   74  2  2   98  101   238 0.991  24.64
 1.00 Prom -  39190  39151   40                              -4.96

 2.20 PlyA -  42575  42570    6                               1.05
 2.19 Term -  52566  52462  105  0  0   90   45    59 0.117   0.21
 2.18 Intr -  67094  66955  140  0  2   43   58    74 0.073   0.08
 2.17 Intr -  71300  71162  139  2  1  107   70    97 0.966   9.84
 2.16 Intr -  75007  74898  110  2  2   45   73    63 0.015   0.50
 2.15 Intr -  78392  78333   60  0  0   73   90    54 0.030   2.81
 2.14 Intr -  84679  84562  118  1  1   59   42    81 0.039   0.64
 2.13 Intr - 100145 100013  133  1  1  115   66   172 0.226  18.35
 2.12 Intr - 101128 101027  102  0  0   70   81    89 0.975   5.69
 2.11 Intr - 103486 103364  123  0  0   87   82    83 0.980   7.30
 2.10 Intr - 104351 104164  188  2  2   59   65    27 0.921  -4.01
 2.09 Intr - 106270 106154  117  1  0   95   89   107 0.999  12.16
 2.08 Intr - 107336 107212  125  0  2   95   97    50 0.928   6.90
 2.07 Intr - 110764 110651  114  2  0  109   61    25 0.763   2.32
 2.06 Intr - 120388 120254  135  2  0  107   76   188 0.969  20.04
 2.05 Intr - 132331 132220  112  1  1   47   86    71 0.208   2.75
 2.04 Intr - 134577 134413  165  0  0   57   69    59 0.124   1.06
 2.03 Intr - 136760 136699   62  0  2   39   84    51 0.025  -1.75
 2.02 Intr - 161063 160917  147  0  0   56   57    73 0.309   1.21
 2.01 Init - 177376 177262  115  1  1   71   63   330 0.999  27.17
 2.00 Prom - 193667 193628   40                              -5.06

 3.03 PlyA - 194278 194273    6                               1.05
 3.02 Term - 233547 233446  102  0  0   56   55   105 0.692   2.28
 3.01 Init - 234720 234697   24  0  0   96   94    29 0.499   2.88
 3.00 Prom - 256594 256555   40                              -4.46

 4.03 PlyA - 256985 256980    6                               1.05
 4.02 Term - 261390 260973  418  2  1   77   44   214 0.372  10.65
 4.01 Init - 277034 276991   44  2  2   59   90    32 0.131   0.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  74995  74898   98  1  2   74   73   149 0.891   9.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:49536315_49813634|GENSCAN_predicted_peptide_1|247_aa
MAWAALLGLLAALLLLLLLSRRRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEK
HGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDVQLPHYSPSDE
KARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTL
YGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVAISSAKWGEQQDLPRG
QLLELAE

>gi568815578r:49536315_49813634|GENSCAN_predicted_CDS_1|741_bp
atggcttgggccgcgctcctcggcctcctggccgcactgttgctgctgctgctactgagc
cgccgccgcacgcggcgacctggtgagcctcccctggacctgggcagcatcccctggttg
gggtatgccttggactttggaaaagatgctgccagcttcctcacgaggatgaaggagaag
cacggtgacatctttactatactggttgggggcaggtatgtcaccgttctcctggaccca
cactcctacgacgcggtggtgtgggagcctcgcaccaggctcgacttccatgcctatgcc
atcttcctcatggagaggatttttgatgtgcagcttccacattacagccccagtgatgaa
aaggccaggatgaaactgactcttctccacagagagctccaggcactcacagaagccatg
tataccaacctccatgcagtgctgttgggcgatgctacagaagcaggcagtggctggcac
gagatgggtctcctcgacttctcctacagcttcctgctcagagccggctacctgactctt
tacggaattgaggcgctgccacgcacccatgaaagccaggcccaggaccgcgtccactca
gctgatgtcttccacacctttcgccagctcgaccggctgctccccaaactggcccgtggc
tccctgtcagtggcgatctcatctgcaaaatggggggaacagcaggatcttcctagaggg
cagctgttagaattggctgag

>gi568815578r:49536315_49813634|GENSCAN_predicted_peptide_2|769_aa
MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIECTARSPRASVSAKGKPSRLCS
LKGAAALEEQVLWLLKSGALGADNNCLEDKSKSLIRFKLKVFGKNTQKDEYLKVGTTGLE
YEHFTLICIANLSRGYINLFPSTRCGIPVPPKPLNVGEALVEQHIPISNIRHTLTPPPPP
PILRRVVLISVRVQFQWNQQVNTYLFMMQAQGILIRDNVRTIGAQVYEQVLRSAYAKRNS
SVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPSMKGPIDINMSEIGMDYIH
ELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRLQFAFY
VVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPRHFATK
LDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPE
GDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKNITVNL
TPELAQGTQSKTLIDQKSGTSRTHHSVASPFSTDDDSGKVPEPLAGPEVGAGDEAVEYPS
YINSQGSPRDDPVPARPGCGSGAPWRLHGALQQSPKSLAMGKVKHHDSEKASDLPKITGP
TESQPECKPGPSDLEYALFTMAPGTKTPVLEAGSPSSRCRLSGLISVKASLFGLQMATLL
LPLHTVIPLCMCAPEEVTHLTSLEFALLHLIPMVLNQGSFASQDTFSNV

>gi568815578r:49536315_49813634|GENSCAN_predicted_CDS_2|2310_bp
atgcgcgcccgccgggggctgctgcggctgccgcgccgctcgctgctcgccgcgctcttc
ttcttttctctctcgtcctcgctgctgtacttcgtctatgtggcgcccggcatagaatgt
acagccagaagtccaagagcaagcgtctctgcgaagggtaaaccttccaggctgtgctcc
ctcaaaggcgccgctgcgcttgaggagcaggtgctgtggctgctgaagtcaggtgctctg
ggagcagacaacaactgcctggaagataagtctaagagcttgattcgatttaaattaaaa
gtttttggcaagaatactcagaaggatgaatacctgaaagtaggaactactgggttagag
tatgaacatttcactttgatctgtattgccaacctctctagaggttatatcaatttgttt
ccatcaacaaggtgtgggatacctgttccaccaaagcctctgaatgttggtgaggctttg
gtagaacagcacattcccatcagcaacatccgtcataccctgacgccccccccaccccca
cccattctccgcagggttgttttgataagtgtacgtgttcagtttcaatggaaccagcaa
gtgaacacctacctcttcatgatgcaagcccaaggcattctgatccgggacaacgtgaga
acaatcggtgctcaggtttatgagcaggtgcttcggagtgcttatgccaagaggaacagc
agtgtaaatgactcagattatcctcttgacttgaaccacagtgaaaccttcctgcaaact
acaacatttcttcctgaagacttcacctactttgcaaaccatacctgccctgaaagactc
ccttccatgaagggcccaatagacataaacatgagtgaaattggaatggattacattcat
gaactcttctccaaagacccaaccatcaagctcggaggtcactggaagccttctgattgc
atgcctcggtggaaggtggcgatccttatccccttccggaaccgccacgagcacctccca
gtcctgttcagacacctgcttcccatgctccagcgccagcgcttgcagtttgcattttat
gtggttgaacaagttggtacccaaccctttaatcgagccatgcttttcaacgttggcttt
caagaggcaatgaaagacttggattgggactgtttgatttttcatgatgtagatcacata
ccggaaagtgatcgcaactattatggatgtggacagatgccgaggcattttgcaaccaaa
ttggataagtatatgtatctgcttccttataccgagttctttggcggagtgagtggctta
acagtggaacaatttcggaaaatcaatggctttcctaatgctttctggggttggggtgga
gaagatgacgacctctggaacagagtacagaatgcaggctattctgtgagccggccagag
ggtgacacaggaaagtacaagtccattcctcatcaccatcgaggagaagtccagtttctt
ggaaggtatgctctgctgaggaagtcaaaagaacggcaagggctggatggcctcaacaac
ctgaactactttgcaaacatcacatacgacgccttgtataaaaacataactgtcaacctg
acacccgagctggctcagggaacccaatcaaagacgctgatcgatcagaagagcggtaca
agtagaacacaccactcagtggcaagtcctttctccacagatgatgactcagggaaggtc
ccagagcctctggcaggccccgaggtaggtgctggggatgaagctgtggagtatcctagt
tatatcaactctcagggtagcccgcgggatgacccggtccccgcgcgtcctgggtgcggc
tcgggcgctccctggcggctgcacggggcattgcagcagtccccgaagagcctggcgatg
ggaaaggtaaagcaccatgactcagagaaggcaagtgacttgcctaaaatcacagggccc
acagagtcacagccagaatgcaagcctgggccctcagatctggagtatgccctcttcacc
atggctccaggcaccaaaactccagtgctggaggctggaagtccaagctcgagatgccgg
ctgtcagggttgatttccgtcaaggcctctctctttggcctgcagatggcgaccctcttg
ctgcctctgcacacggtcatccctctgtgcatgtgcgctcctgaggaagtaactcatctt
acctctttggaatttgctcttctacatcttatccccatggttctcaaccagggcagcttt
gcctctcaggacacatttagcaatgtctga

>gi568815578r:49536315_49813634|GENSCAN_predicted_peptide_3|41_aa
MAGNKMVEHPNFPSDNEAKAIGALAIVLTFNARWPKLRLFV

>gi568815578r:49536315_49813634|GENSCAN_predicted_CDS_3|126_bp
atggccggaaacaagatggtggagcaccccaattttccttcagacaatgaagcaaaggct
ataggtgccctggccattgtcctaaccttcaatgcacgctggcccaagcttcgtctcttt
gtctga

>gi568815578r:49536315_49813634|GENSCAN_predicted_peptide_4|153_aa
MKTDRYTGGDWLRRSPATGTGTNESKPIMRLASFCQSLVPEWASDLPQANEKWREVCQTL
LGKFFLTLPGRWPGSESIFLPDMKEDARGPDSSWQSSCDHEEDQPEDETNTVDGDMEKAW
LQDEITRLLDLLLPRPRNVLCGEPGEPVPVKHA

>gi568815578r:49536315_49813634|GENSCAN_predicted_CDS_4|462_bp
atgaaaactgatcgttatacaggaggcgactggctacgtaggagcccagccacaggcact
ggaaccaatgagtctaagccaatcatgagacttgcatctttttgccagagtttggttccg
gaatgggcctctgacctacctcaggctaatgagaagtggagagaagtttgccagacgctt
ctgggaaagttcttcctcactcttccaggaagatggcctggaagtgaatctattttccta
ccagacatgaaagaggatgcccgtggccctgatagctcctggcagtcatcctgcgatcac
gaggaggaccagcctgaggatgaaaccaacactgtggacggagacatggaaaaagcctgg
ctccaggatgagatcactaggctgctggatctcctgctcccccgtcctagaaatgtcctg
tgtggggagccaggggagcctgttccagtaaagcacgcttga