GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:14:48

Sequence gi568815597r:217510320_217730971 : 220652 bp : 36.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13050  13170  121  2  1   68   74    79 0.483   4.90
 1.02 Intr +  19706  19743   38  0  2   93  103    17 0.264   0.76
 1.03 Intr +  43692  43802  111  2  0   33   37   115 0.041   0.56
 1.04 Intr +  44847  44889   43  2  1   67  121    21 0.336   0.19
 1.05 Intr +  50324  50404   81  0  0   75   70    59 0.322   1.49
 1.06 Intr +  61554  61709  156  1  0   13   75   114 0.294   1.66
 1.07 Term +  62647  62771  125  2  2   31   47    92 0.217  -3.03
 1.08 PlyA +  64023  64028    6                               1.05

 2.06 PlyA -  64932  64927    6                               1.05
 2.05 Term -  71903  71763  141  2  0   84   48    48 0.113  -2.65
 2.04 Intr - 100081 100002   80  2  2   59   66    68 0.283   0.05
 2.03 Intr - 100752 100570  183  1  0   58   78   160 0.800  10.84
 2.02 Intr - 103883 103822   62  1  2   98   79    48 0.980   2.36
 2.01 Init - 110164 109464  701  1  2   99   57   578 0.980  50.30
 2.00 Prom - 111319 111280   40                              -5.85

 3.00 Prom + 115925 115964   40                              -9.05
 3.01 Init + 116190 116198    9  2  0   65   89     0 0.162  -1.68
 3.02 Term + 120582 120755  174  2  0  119   49   190 0.986  14.98
 3.03 PlyA + 120875 120880    6                               1.05

 4.02 PlyA - 122175 122170    6                               1.05
 4.01 Sngl - 133105 132917  189  1  0   71   42   199 0.685   8.46
 4.00 Prom - 147536 147497   40                              -3.95

 5.04 PlyA - 149985 149980    6                               1.05
 5.03 Term - 174969 174922   48  0  0  103   49    75 0.147   1.43
 5.02 Intr - 182361 180859 1503  0  0    6   13   516 0.032  24.84
 5.01 Init - 183788 182751 1038  2  0   44   41   495 0.041  34.43
 5.00 Prom - 183881 183842   40                              -6.15

 6.03 PlyA - 184050 184045    6                               1.05
 6.02 Term - 184830 184278  553  2  1  -48   43   334 0.761   8.10
 6.01 Init - 185294 184909  386  2  2   88   44   420 0.974  33.96
 6.00 Prom - 195537 195498   40                              -0.95

 7.02 PlyA - 195654 195649    6                               1.05
 7.01 Sngl - 202629 202441  189  0  0   45   48   179 0.780   3.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 183788 182373 1416  2  0   44   42   572 0.859  43.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_1|224_aa
MTLNEHAAFKRLFNKAQLAPPLIHLTLSGHSTCFREHRVGGYKINSDKDITFVMGPTGRF
SANNSSFFGPSCPALELAPADNDEYQGYSKVLFLKTNVKSNAAKGASFTAEFLNPCMIDI
WGQVNSLLWETAWATRDSEKQKDRKKDRQTKEERKKREEGRKEGKKERRKEGRKEGRKEG
RKGDTLGQNPDVLQSKTLEVQEERKSDTKVHNPFIYNMLFKQIK

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_1|675_bp
atgactcttaacgagcatgctgccttcaagcgtctgtttaacaaggcacaacttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttggg
ggttacaaaatcaacagtgacaaagacataacctttgtgatgggaccaactggacgcttc
agcgcaaacaactcatccttcttcggaccttcttgtccagctcttgagctagctccagct
gataatgatgaataccaaggctacagtaaagtcctctttttaaaaaccaacgtgaaaagt
aatgcagcaaaaggtgcttcatttacagcagaatttctcaacccctgcatgattgacatc
tggggccaggttaattctttgctgtgggagactgcctgggccacaagagattctgagaaa
cagaaagacagaaagaaagacagacagacaaaagaagaaagaaagaaaagggaggaagga
aggaaggaaggaaagaaagaaagaaggaaggaaggaaggaaagaaggaaggaaggaagga
aggaagggagatacgttaggacaaaatccagatgtcctgcaatccaaaacattagaagtg
caagaagaaaggaagtccgacacaaaagttcataaccccttcatctacaatatgcttttt
aagcaaataaaatga

>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_2|388_aa
MEELVHDLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWET
GHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWH
ESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEF
TKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDELMSESDSSSLS
STDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITGVVPWWEKEDPTELDKNVPDPVFES
ILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMLNKRCSGEWHRKRVTEVY
RRKEVGESEQLHNQVIIPNPIQASCFYV

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_2|1167_bp
atggaggagctggttcatgaccttgtctcagcattggaagagagctcagagcaagctcga
ggtggatttgctgaaacaggagaccattctcgaagtatatcttgccctctgaaacgccag
gcaaggaaaaggagagggagaaaacggaggtcgtataatgtgcatcacccgtgggagact
ggtcactgcttaagtgaaggctctgattctagtttagaagaaccaagcaaggactataga
gagaatcacaataataataaaaaagatcacagtgactctgatgaccaaatgttagtagca
aagcgcaggccgtcatcaaacttaaataataatgttcgagggaaaagacctctatggcat
gagtctgattttgctgtggacaatgttgggaatagaactctgcgcaggaggagaaaggta
aaacgcatggcagtagatctcccacaggacatctctaacaaacggacaatgacccagcca
cctgagggttgtagagatcaggacatggacagtgatagagcctaccagtatcaagaattt
accaagaacaaagtcaaaaaaagaaagttgaaaataatcagacaaggaccaaaaatccaa
gatgaaggagtagttttagaaagtgaggaaacgaaccagaccaataaggacaaaatggaa
tgtgaagagcaaaaagtctcagatgagctcatgagtgaaagtgattccagcagtctcagc
agcactgatgctggattgtttaccaatgatgagggaagacaaggtgatgatgaacagagt
gactggttctacgaaaaggaatcaggtggagcatgtggtatcactggagttgtgccctgg
tgggaaaaggaagatcctactgagctagacaaaaatgtaccagatcctgtctttgaaagt
atcttaactggttcttttccccttatgtcacacccaagcagaagaggtttccaagctaga
ctcagtcgccttcatggaatgtcttcaaagaatattaaaaaatctggagggactccaact
tcaatgttaaataagagatgcagcggggaatggcacaggaagagggtgacagaagtgtat
agacgaaaagaagtaggggagagtgaacagttgcataatcaagtaataattcccaaccca
attcaggctagttgtttctatgtttga

>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_3|60_aa
MQMGRQPHQLFPAAGAPIGWRPAAPNINDTREPGLEAQAREQTPTTTAPATSKEQFSILR

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_3|183_bp
atgcaaatgggccgccagcctcaccagctgttcccggctgctggagctccgatcggttgg
cgcccggcggccccgaacattaacgacacccgggagcctggcctcgaagctcaggcccgt
gaacagactccaactacaacagcaccggcgacttccaaagagcagttcagcattttgaga
tga

>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_4|62_aa
MKKESAHEGSQYRESEPKSDEGNIQVGGEAMVQHEEVEPALGLREEAVVVTIVWLHKEDL
IR

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_4|189_bp
atgaaaaaagaatctgcacatgaaggtagccagtatagagaatcagagcccaagagtgat
gagggaaacatccaagttggtggggaggcgatggttcagcatgaggaggtagagcccgca
ctgggtctaagagaagaggcagttgtggtgacaatagtttggttacataaagaggatctg
atcagataa

>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_5|862_aa
MGDFNTPLSTLDRSTRQTVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTVTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIKTQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLN
QEEAESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELKLGIDGTYFKIIRA
IYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGK
EEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQ
IMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINI
VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITL
PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHTYNYLIFDKPEKNKQWGKDSLF
NKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGK
DFMSKTPKAMAAKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISR
IYNELKQIYKKKTYNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRY
HLTPVRMGSDKSEASKAPEVQN

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_5|2589_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagacagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaagccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccgtaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaataaagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaag
aaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccacc
gatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggatacattcctcgacacatacactctcccaagactaaac
caggaagaagctgaatctctgaatagaccaataacaggagctgaaattgtggcaataatc
aacagtttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactgaaattaggtattgatgggacgtatttcaaaataataagagct
atctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccct
ttgaaaactggcacaagacagggatgccctctctcaccgctcctatttaacatagtgttg
gaagttctggccagggcaatcaggcaggagaaggaaataaagggtattcaattaggaaaa
gaggaagtcaaattgtccctgtttgcagacgacatgattgtttatctagaaaaccccatc
gtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaa
atcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaa
atcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaata
aaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatc
gtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagcta
ccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacacta
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaa
aacagagatatagatcaatggaacagaacagagccctcagaaataacgccgcatacctac
aactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctgttt
aataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaa
accataaaaaccctagaagaaaacctaggcattaccattcaggacataggcgtgggcaag
gacttcatgtccaaaacaccaaaagcaatggcagcaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctacaacatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccaga
atctacaatgaactcaaacaaatttacaagaaaaaaacatacaaccccatcaaaaagtgg
gcaaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatg
aagaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatat
catctcacaccagttagaatgggctcagacaagagtgaagcaagtaaggcccctgaagtg
cagaattga

>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_6|312_aa
MGKKQNRKTGNSKTQSASPPPKERSSSPAMEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCDQLEERVSA
MEDEMNEMKPNLRLIGVPESDAENGTKLENTLQDIIQENFPNLARQANVQIQEIQRTPQR
YSSRRATPRHIIVRFTKVEMKEKMLRATREKGRVTLKGKPIRLTADLSAETLQARREWGP
IFNILKEKNFQPRISYPAKLSFISEGEIKSFTHKQMLRDFVTTRPALKELLKEALNMERN
NRYQPLQNHAKM

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_6|939_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaacgcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaatggaacaaagctggatggagaatgattttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagca
atggaagatgaaatgaatgaaatgaaaccaaatctacgtctgattggtgtacctgaaagt
gatgcggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttc
cccaacctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaaga
tactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatg
aaggaaaaaatgttaagggcaaccagagagaaaggtcgggttaccctcaaagggaagccc
atcagactaacagcggatctctcggcagaaaccctacaagccagaagagagtgggggcca
atattcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaacta
agcttcataagtgaaggagaaataaaatcctttacacacaagcaaatgctgagagatttt
gtcaccaccaggcctgccctaaaagagctcctgaaggaagcgctaaacatggaaaggaac
aaccggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815597r:217510320_217730971|GENSCAN_predicted_peptide_7|62_aa
MAKVRGVNVLALTVPFMLFLALSTSTLPVGTPSECCWSLDAKTSPAEPSVTLFEPPEVDS
AF

>gi568815597r:217510320_217730971|GENSCAN_predicted_CDS_7|189_bp
atggccaaggttcggggagtgaacgtcttggctctgactgttccattcatgctatttctt
gcccttagtacttcaactctgccagtaggaacaccttccgagtgctgctggtctctggat
gccaaaacatcccctgctgagccctctgtaactctatttgagccacctgaggtcgattct
gctttctga