GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:12:04

Sequence gi568815590f:8903064_9130031 : 226968 bp : 41.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    433    493   61  1  1  122  111    26 0.607   6.12
 1.02 Intr +   2268   2393  126  2  0   25   92    61 0.156   0.16
 1.03 Intr +  17050  17121   72  0  0   78   78    39 0.002   0.58
 1.04 Intr +  21298  21355   58  0  1   88   92    66 0.442   4.54
 1.05 Term +  26852  26961  110  0  2   96   41   101 0.468   3.89
 1.06 PlyA +  28910  28915    6                               1.05

 2.04 PlyA -  30635  30630    6                               1.05
 2.03 Term -  30990  30735  256  2  1    5   39   232 0.768   4.07
 2.02 Intr -  32713  32603  111  0  0   69   55   126 0.576   5.98
 2.01 Init -  45749  45679   71  2  2   68   15    84 0.083  -0.33
 2.00 Prom -  49022  48983   40                              -3.85

 3.00 Prom +  50402  50441   40                              -4.95
 3.01 Init +  58131  58191   61  2  1   86   97    86 0.978  10.76
 3.02 Intr +  58697  58981  285  0  0   47   52   344 0.564  23.09
 3.03 Intr +  60835  61075  241  2  1   50   27   101 0.010  -4.11
 3.04 Intr +  70997  71204  208  2  1   45   54   175 0.063   7.96
 3.05 Intr +  75934  76142  209  0  2   68   27   122 0.064   1.05
 3.06 Intr +  92178  92379  202  0  1  100   64   189 0.342  16.07
 3.07 Intr +  99974 100267  294  1  0  -26   63   256 0.005   7.98
 3.08 Intr + 104907 105085  179  2  2   94   59   155 0.995  11.00
 3.09 Intr + 108479 108689  211  2  1   67   92   152 0.984  11.49
 3.10 Intr + 113259 113342   84  2  0  140   29    48 0.786   3.20
 3.11 Intr + 115234 115343  110  0  2  101  106     7 0.944   1.96
 3.12 Intr + 117287 117401  115  2  1   85   93    36 0.957   3.33
 3.13 Intr + 118032 118163  132  2  0   83   93    62 0.978   6.12
 3.14 Intr + 141241 141411  171  0  0   14   96   159 0.982   8.52
 3.15 Term + 143249 143335   87  1  0  102   53    65 0.795   1.08
 3.16 PlyA + 143982 143987    6                               1.05

 4.04 PlyA - 144723 144718    6                               1.05
 4.03 Term - 149443 149357   87  1  0   38   49   153 0.394   3.08
 4.02 Intr - 153192 153031  162  0  0   79   39    83 0.640   1.75
 4.01 Init - 155273 155130  144  2  0  107   66   108 0.404  10.67
 4.00 Prom - 155990 155951   40                              -5.85

 5.02 PlyA - 156650 156645    6                               1.05
 5.01 Sngl - 157309 156698  612  1  0   90   40   186 0.670   9.95
 5.00 Prom - 160216 160177   40                              -3.75

 6.12 PlyA - 161793 161788    6                               1.05
 6.11 Term - 163231 162924  308  2  2    3   43   238 0.297   5.09
 6.10 Intr - 167692 167615   78  2  0   78   85    48 0.765   2.10
 6.09 Intr - 168023 167884  140  1  2   76   89   105 0.703   8.59
 6.08 Intr - 175953 175917   37  1  1   83   92    30 0.013  -0.70
 6.07 Intr - 187165 187072   94  1  1  129   81    -1 0.069   1.92
 6.06 Intr - 193474 193321  154  0  1   93   73   127 0.349  10.85
 6.05 Intr - 199803 199652  152  0  2   -9   94   109 0.508  -0.16
 6.04 Intr - 200634 200445  190  2  1   99   97    58 0.766   6.47
 6.03 Intr - 205216 205092  125  1  2   20   62   129 0.683   1.96
 6.02 Intr - 207288 207185  104  1  2   34  113    67 0.772   2.77
 6.01 Init - 208829 208502  328  2  1  103   33   279 0.841  21.43
 6.00 Prom - 210931 210892   40                              -4.75

 7.00 Prom + 210958 210997   40                              -7.45
 7.01 Init + 215327 215380   54  1  0   52   93   -12 0.326  -2.97
 7.02 Term + 217900 218142  243  0  0  121   47   269 0.799  21.02
 7.03 PlyA + 218375 218380    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  17115  16928  188  0  2   62   77   203 0.820  15.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_1|142_aa
XPFSGSRSESTKKEPSTLLSPLFRICVNSQWLFNCSLSPPVVGCQEPFVHVTPHPCLRII
RPEPPQQPAITNRSKGRSLSNFIRHCEAQYRVEAAKAWGFHPLKPQQLALTCCITQVLLV
GHTKGVANYRKKIQKKEFPERI

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_1|429_bp
nngcctttttctggatccaggagcgaatcaactaagaaagagcctagcacccttttaagt
ccgctttttcgtatctgtgtaaattcacaatggctcttcaactgctccctgtctccccca
gtagtgggctgtcaggagccatttgtccatgtgaccccacatccttgccttcgaataatt
agacctgagcctccgcagcagccagccatcactaacagaagtaaggggagaagtcttagc
aacttcattagacattgtgaggctcaataccgtgtagaagctgccaaggcttggggcttc
caccctctgaagccacaacagttggccctcacatgctgtatcacccaggtccttctggtt
gggcataccaagggagtagcgaattatcggaaaaaaattcagaagaaagaattcccagaa
agaatttaa

>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_2|145_aa
MRMAVEKYDWTQPYDLMAVNWRETNSRHRSFQLPFSSAKDSVSAALDGVFGLPGSIRGTM
RSWIWDERKWKKCGTTAAMVAVCGGLGRKKLTHLVTAAVSLTHSGTHTVLWRRGCSQYKQ
VSSNEDLVFVGRNRKKSRKQLRELK

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_2|438_bp
atgaggatggccgtggaaaagtatgattggacacagccgtatgatctaatggcagtaaac
tggagagaaacgaactcccggcaccgctcctttcagcttcctttcagctctgccaaagat
tctgtctcagcagctttggatggagttttcgggcttcctggcagcatccgcgggaccatg
aggtcctggatttgggatgaaaggaagtggaagaaatgcggaaccacggccgctatggtt
gctgtttgcggtggtctagggaggaagaagttgacacacctggtaacggctgctgtcagc
cttacacattccgggactcacacggtgctttggagaagaggttgttcacaatataaacag
gtatccagcaacgaggacctggtctttgtgggaagaaacagaaagaaatcacgaaagcaa
ttaagagagctcaaataa

>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_3|862_aa
MVEGKEEQVTSYVDVQRACAGIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALC
KANFKFPGRQNIHFSEKWDFTKFSVDEFEDMMAEKQLIPITVGSSIPPIVTLRTSGMESP
CNTGCSYGNCYKTRSGFTRVGRRNLPRKPGARVMGVDVLLGPRKVGSDEEALKKSQYDDD
AFMVKFCASSTEHFLNNPQTDAVLGQRYGRESKSPKCLNHKHRDLTPVTVETNALASDPY
RSAFLPLNGAVRGELGCRTGGEKNVGKMSRCETGRSHPTSGSSGSGTSDCIQQGAREASE
APAETQDWLPLPSSGDVSRHSAAPARGLLQLLPSGFDMTARQFHNAYLPYQRPLMMEMLW
PVYRECTEDFRSSASPSDVRRLKTPHSDYANAAICVHVTHEEQLSSGVTAGMEDPQSKEP
AGEAVALALLESPRPEGGEEPPRPSPEVRSRPAPGCWRQLPRPQSALGTPFFSGVPQKVQ
LCALGPQPLPRCPAPWLYPRETQQCKFDGQETKGSKFITSSASDFSDPVYKEIAITNGCI
NRMSKEELRAKLSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNFADSYYDYICIIDFE
ATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQ
VDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKK
WINIRKSYGNFYKLYYLSVRALSVHTPVTMESVHNFPLDVIIYFRGCLLIPLLSIQTRIS
DPGSWNGAEIVERSEVTLVWESGGCEEQKGSQRPGQQTHHCVSSVGEFTLAPIQPGSKSQ
SAERDMSSTYARLPRGDEAEQP

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_3|2589_bp
atggtggaaggcaaggaggagcaagtcacatcttacgtggatgtccagagagcttgtgca
ggtattcgaggtgcctttgaaaagccccagggtgctgtggccagggttcacattggccaa
gtcatcatgtccatctgcaccaagctgcagaacaaggagcatgtgattgaggccctatgc
aaggccaactttaagttccctggccgccagaatatccacttctcagagaagtgggacttt
accaagttcagtgtggatgaatttgaagacatgatggctgagaagcagcttatcccaata
actgtggggtcaagtatacccccaatcgtgaccctccggacaagcgggatggagtcgccc
tgcaacacgggctgctcctatggcaactgctacaaaacaagatcaggcttcaccagggtc
gggagaagaaacctcccaagaaagccaggcgctagagtcatgggtgtggatgtcctttta
gggcctaggaaagtagggtctgatgaggaggcattgaagaaaagccagtatgacgacgat
gctttcatggtgaagttttgtgcatcttctactgaacattttttaaacaacccccaaaca
gatgcagttttgggccagcgttatggaagagaaagcaaatcccccaaatgtctgaatcac
aaacacagagacctcacccccgtgacagtggaaacaaatgccctggcctctgacccctac
agatccgcgttcctgcccctaaacggtgcagtgaggggagagctgggctgcagaacaggt
ggagagaagaacgtggggaagatgagcaggtgcgagacagggagaagccatcctacttct
ggctccagcggcagcggtaccagtgactgtatacaacagggggcccgagaagcatctgag
gctccagcggagacacaggattggcttccgctccccagcagtggggacgtctccagacat
tcagcagctccagcccggggactgctgcagcttctaccctctggtttcgacatgacagct
cgccagtttcacaatgcataccttccttatcagagaccgttgatgatggagatgctctgg
ccagtctatagagaatgcacagaggattttcggtcctctgcttcaccttctgatgtcaga
aggctgaaaactccacactcagattatgctaatgctgccatttgtgtacatgtgacccat
gaagagcaactctcctctggcgtgacagccggcatggaggatccacagagtaaagagcct
gccggcgaggccgtggctctcgcgctgctggagtcgccgcggccggagggcggggaggag
ccgccgcgtcccagtcccgaggtgaggagtcgacccgcgcctggctgttggcgccagctg
ccccgtccccaaagcgccctcggcacccctttcttctcaggtgtcccgcagaaggtgcag
ctgtgcgcccttggaccccagcctcttcctcggtgcccagctccctggctttatcctcgg
gaaactcaacagtgtaaatttgatggccaggagacaaaaggatccaagttcattacctcc
agtgcgagtgacttcagtgacccggtttacaaagagattgccattacgaatggctgtatt
aatagaatgagtaaggaagaactcagagctaagctttcagaattcaagcttgaaactaga
ggagtaaaggatgttctaaagaagagactgaaaaactattataagaagcagaagctgatg
ctgaaagagagcaattttgctgacagttattatgactacatttgtattattgactttgaa
gccacttgtgaagaaggaaacccacctgagtttgtacatgaaataattgaatttccggtt
gttttactgaatacgcatactttagaaatagaagacacgtttcagcagtatgtaagacca
gagattaacacacagctgtctgatttctgcatcagtctaactggaattactcaggatcag
gtagacagagctgataccttccctcaggtactaaaaaaagtaattgactggatgaaattg
aaggaattaggaacaaagtataaatactcacttttaacagatggttcttgggatatgagt
aagttcttgaacattcagtgtcaactcagcaggctcaaataccctccttttgcgaaaaag
tggatcaatattcggaagtcatatggaaatttttacaagctctattacctttcagtcaga
gcactcagtgttcatactcccgtgactatggagagtgtccacaactttcccctggatgta
ataatttacttccgcggttgtttacttatccccttactctccattcaaactcggataagt
gatcccggatcctggaatggtgctgagattgttgaaagaagcgaggtgactttggtgtgg
gaatcaggaggatgtgaggaacagaagggaagccagcgaccaggtcagcagacacatcac
tgcgtcagttcagtaggagagttcacactggcccccatacagcctggcagtaaaagccag
tcagcagagagagacatgagcagcacatatgcgagactgcctagaggagatgaggcagag
cagccctga

>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_4|130_aa
MGHIATYEVLNRNCPWLHPFSQRTFTPSGNPISSAGFLDLFTHQLQGHGVPHPADPKSAE
TVSSTSSGAGDHSSKAQKPFHFQTLLHDVSSKLQEPIAHRHPNAAGVSDGTLPESQRLSA
LGEFNQSAPE

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_4|393_bp
atggggcacatagcaacctacgaggtcttaaatagaaactgcccgtggctccaccctttc
tctcagcgcacattcactccatcaggaaatcccatcagctctgccggattcctggatctt
ttcactcaccagctccagggccacggagtgccccatccagctgatcccaaatccgcagag
acagtgtcttccacttccagcggagctggggatcacagctccaaggcccagaaacctttc
catttccaaactcttcttcacgatgtctcctcgaagctccaggaacccatagcacatagg
caccctaatgctgctggtgtcagtgacggtaccttgccagaatcccagagactcagtgct
ctaggcgagttcaaccaatcagcaccagaatag

>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_5|203_aa
MPQVRKLKYLLVWVDTFTGWVEVFLTGSEKATAVISSLLSDIIPRFGLPTSIQSNNRPAF
ISQITQAVSQALGIQWKLRTPYHPQYSGKVERTNGLLKTHLTKLSLQLKKDWTILLPLSL
LRIQACPRNATGYSPFELLYGRSFLLSPSLIPDTRPTWTVPQKTCHPYYLLSSHTPIHHS
QLLIHALLLFTLPVHTVSPSHRS

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_5|612_bp
atgccccaagtcagaaaactaaaatatctcttagtctgggtagacactttcactggatgg
gtagaggtctttctcacagggtctgagaaggccaccgcggtcatttcttcccttctgtca
gacataattcctcggtttggccttcccacctctatacagtccaataacagaccagccttt
attagtcaaatcacccaagcagtttctcaggctcttggtattcagtggaaacttcgtacc
ccttaccatcctcaatattcaggaaaggtagaacggactaatggtcttttaaagacacat
cttaccaagctcagcctccaacttaaaaaggactggacaatacttttaccactttccctt
ctcagaattcaggcctgtcctcggaatgctacagggtacagcccatttgagctcctgtat
ggacgctcctttttattaagccccagtctcattccagacaccagaccaacttggactgtg
ccccagaaaacttgtcatccctactatcttctgtctagtcatactcctattcaccattct
caactactcatacatgccctgctcttgtttacactgccggttcacactgtttctccaagc
catcgcagctga

>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_6|569_aa
MDDFERVRTLVEEVNAEVVGIAREFELEVEPEDMTELLQSHHKTSTNEALLLTDEQRKWF
LEMESTPVEDAVNIPETTTKDLEYYLSLVDTAAAGFERTDSNFERGSTMVESLAYSSDLY
EQDIPMSLDVLYYDFYNNLGIIWKQGFEPDKTMELVTEIPALSWNPARAASLVIRSTRKI
YPSVPRSSSCPSKPLFWPGIPQPAVKVRADPTVFREVGNASLNLLQCSQESEILASTCFL
STEKRDQGLSQAQVKQGASCNMYEESTKSKHKCRASKNKRAKCKTRKSKYAQALAPRYAS
EPFHSPAVTLSKFFHGASPVTTSMGKKALLLGYLALVQGLREGQSLDEEPRHIRRRKKQW
SFCIIGSSKCPGSLDKVCLQGEGKTTPLRAHNLARPRKICCFGKLEINRPKQPEEMGGEK
IEPVHSAVSAGVQSDGSHGCPYMRLEPDSFRRQMFSFCVHLQGWTPLREETSCAGGERGR
DAPASGNPNEENGEMRLTIRRTKKRKKVGRKRRRKKVEARKRVEMNEEARAPGGKQGTAD
REDSGVDIAKQKMRRIARQQKSQRKKRRP

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_6|1710_bp
atggatgactttgagagggtcaggactttagtggaggaagtcaatgcagaggtggtggga
atagcaagagaattcgaattagaagtggaacctgaagatatgactgaattgctgcaatct
catcataaaacttcaacaaatgaggcgttgcttcttacggatgagcaacgaaagtggttt
cttgagatggaatctactcctgttgaagatgctgtgaacattcctgaaacaacaacaaag
gatttagaatattacctaagcctagttgacacagcagcggcaggatttgagaggactgac
tctaattttgaaagaggttctaccatggtagaaagtctggcttattcctctgacctttat
gaacaagacattcctatgtccttagacgttctttactatgacttctacaacaacctgggc
atcatatggaagcaaggctttgagcctgataaaaccatggagctggtaactgaaattcct
gcattaagctggaaccctgctagagctgcctccttggttataagatcaactagaaaaatc
tacccgtcagtaccaaggagctccagctgcccctccaagcccctcttctggcctggcatt
ccccagcctgcagtgaaggtcagagcagatcctaccgtattcagagaagtaggaaacgcg
agcttgaatcttcttcagtgttctcaagagagtgagatattggcaagcacctgttttctc
agcactgagaaaagggatcagggattgtcccaagctcaagttaaacagggggcctcctgc
aatatgtatgaagagagcaccaagagcaaacacaagtgcagggccagtaaaaataaaaga
gcaaagtgcaagactcgaaagagtaaatatgcacaggctctggccccaagatatgccagt
gagccctttcacagtccagcagtgacgttgtccaagttctttcatggtgcctctcctgtg
actacctccatgggaaagaaagcattgcttctggggtacttggccctggttcaaggcttg
agagaaggccaatcccttgatgaagaaccaaggcatatcaggaggaggaagaagcagtgg
agtttctgcataattgggtcaagcaagtgtcctgggtccttggataaggtttgcttacaa
ggagaaggtaagacaacaccccttagagctcataatcttgccaggccaagaaagatatgt
tgctttgggaaactggaaatcaacagaccaaaacagccagaagaaatgggtggagagaag
atagagcccgttcactctgcagtctccgcaggggtacagagtgatggcagccatgggtgc
ccttacatgcgacttgaaccagattctttcagacgccaaatgttctctttctgtgtgcat
ttgcaaggatggactccactgcgagaagaaacaagttgtgcaggtggagaaaggggaaga
gatgcccctgctagtgggaaccccaatgaagaaaatggggagatgaggctgacgataagg
aggacaaagaagaggaagaaggtggggaggaagaggaggaggaagaaggtggaggcaagg
aagagggtggagatgaatgaagaagctagagcccctggtggcaaacagggcactgcagat
agagaagatagtggtgttgatatcgcaaagcagaagatgaggaggatagccaggcagcag
aaaagtcaaagaaaaaaaaggcggccgtga

>gi568815590f:8903064_9130031|GENSCAN_predicted_peptide_7|98_aa
MANQMSNFHSKNFPEGEQGSVQVYVTHICRFSADETVSGDPGQTMLAGRANPGQSAPCLA
ALPGATEELVQQGRLIRVGQSRGVDVLPECAAVADNIG

>gi568815590f:8903064_9130031|GENSCAN_predicted_CDS_7|297_bp
atggctaatcaaatgtcaaattttcacagcaagaattttccagaaggggaacagggctct
gtccaggtgtatgttactcatatttgcagattcagtgctgatgagacagtttctggagac
ccaggacaaacaatgctggctggaagagccaaccctggccagtcagccccttgtttggca
gcacttccaggtgctacagaagaactggtgcagcaaggacgattgattcgtgtgggtcaa
agtaggggtgttgatgttcttccggaatgtgcagcagttgctgataatattggctga