Result of FASTA (ccds) for pF1KB5659
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5659, 308 aa
  1>>>pF1KB5659 308 - 308 aa - 308 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1800+/-0.000836; mu= 17.3670+/- 0.051
 mean_var=89.7140+/-17.057, 0's: 0 Z-trim(109.4): 58  B-trim: 22 in 1/50
 Lambda= 0.135408
 statistics sampled from 10801 (10859) to 10801 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.334), width:  16
 Scan time:  2.610

The best scores are:                                      opt bits E(32554)
CCDS2998.1 FSTL1 gene_id:11167|Hs108|chr3          ( 308) 2146 429.0 2.3e-120
CCDS47157.1 FSTL5 gene_id:56884|Hs108|chr4         ( 837)  304 69.6 9.5e-12
CCDS47158.1 FSTL5 gene_id:56884|Hs108|chr4         ( 846)  304 69.6 9.6e-12
CCDS3802.1 FSTL5 gene_id:56884|Hs108|chr4          ( 847)  304 69.6 9.6e-12
CCDS34238.1 FSTL4 gene_id:23105|Hs108|chr5         ( 842)  299 68.6 1.9e-11


>>CCDS2998.1 FSTL1 gene_id:11167|Hs108|chr3               (308 aa)
 initn: 2146 init1: 2146 opt: 2146  Z-score: 2274.6  bits: 429.0 E(32554): 2.3e-120
Smith-Waterman score: 2146; 100.0% identity (100.0% similar) in 308 aa overlap (1-308:1-308)

               10        20        30        40        50        60
pF1KB5 MWKRWLALALALVAVAWVRAEEELRSKSKICANVFCGAGRECAVTEKGEPTCLCIEQCKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MWKRWLALALALVAVAWVRAEEELRSKSKICANVFCGAGRECAVTEKGEPTCLCIEQCKP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHCKEKKSVSPSASPVVCYQSNRDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 HKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHCKEKKSVSPSASPVVCYQSNRDE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LRRRIIQWLEAEIIPDGWFSKGSNYSEILDKYFKNFDNGDSRLDSSEFLKFVEQNETAIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LRRRIIQWLEAEIIPDGWFSKGSNYSEILDKYFKNFDNGDSRLDSSEFLKFVEQNETAIN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 ITTYPDQENNKLLRGLCVDALIELSDENADWKLSFQEFLKCLNPSFNPPEKKCALEDETY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 ITTYPDQENNKLLRGLCVDALIELSDENADWKLSFQEFLKCLNPSFNPPEKKCALEDETY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ADGAETEVDCNRCVCACGNWVCTAMTCDGKNQKGAQTQTEEEMTRYVQELQKHQETAEKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 ADGAETEVDCNRCVCACGNWVCTAMTCDGKNQKGAQTQTEEEMTRYVQELQKHQETAEKT
              250       260       270       280       290       300

               
pF1KB5 KRVSTKEI
       ::::::::
CCDS29 KRVSTKEI
               

>>CCDS47157.1 FSTL5 gene_id:56884|Hs108|chr4              (837 aa)
 initn: 280 init1: 216 opt: 304  Z-score: 324.4  bits: 69.6 E(32554): 9.5e-12
Smith-Waterman score: 322; 30.5% identity (60.0% similar) in 220 aa overlap (31-244:64-265)

               10        20        30        40         50         
pF1KB5 MWKRWLALALALVAVAWVRAEEELRSKSKICANVFCGAGRECAVT-EKGEPTCLCIEQCK
                                     : : .:: ::.:... : :.  : :.. ::
CCDS47 QPLMRLRHKEKNQESSRVKGFMIQDGPFGSCENKYCGLGRHCVTSRETGQAECACMDLCK
            40        50        60        70        80        90   

      60        70        80        90         100       110       
pF1KB5 PHKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHC--KEKKSVSPSASPVVCYQSN
        : .:::::.:. : ::::.:: :::  .:: . ..  :  :  :  .   : .  .  .
CCDS47 RHYKPVCGSDGEFYENHCEVHRAACLKKQKITIVHNEDCFFKGDKCKTTEYSKMKNMLLD
           100       110       120       130       140       150   

       120       130       140       150        160       170      
pF1KB5 RDELRRRIIQWLEAEIIPDGWFSKGSNYSEILDKYFKNFD-NGDSRLDSSEFLKFVEQNE
        .. .. :.:  : :  :.:  .  :  . ..:..:: :: .... .: .:. . ..:.:
CCDS47 LQN-QKYIMQ--ENEN-PNG--DDISRKKLLVDQMFKYFDADSNGLVDINELTQVIKQEE
            160            170       180       190       200       

        180       190       200       210       220        230     
pF1KB5 TAINITTYPDQENNKLLRGLCVDALIELSDENADWKLSFQEFLKCLNP-SFNPPE-KKCA
        .            : :    . .:.. .: ::: .:...:: . ..  ... :: .: .
CCDS47 LG------------KDLFDCTLYVLLKYDDFNADKHLALEEFYRAFQVIQLSLPEDQKLS
                   210       220       230       240       250     

          240       250       260       270       280       290    
pF1KB5 LEDETYADGAETEVDCNRCVCACGNWVCTAMTCDGKNQKGAQTQTEEEMTRYVQELQKHQ
       .   : ...:                                                  
CCDS47 ITAATVGQSAVLSCAIQGTLRPPIIWKRNNIILNNLDLEDINDFGDDGSLYITKVTTTHV
         260       270       280       290       300       310     

>>CCDS47158.1 FSTL5 gene_id:56884|Hs108|chr4              (846 aa)
 initn: 280 init1: 216 opt: 304  Z-score: 324.3  bits: 69.6 E(32554): 9.6e-12
Smith-Waterman score: 322; 30.5% identity (60.0% similar) in 220 aa overlap (31-244:64-265)

               10        20        30        40         50         
pF1KB5 MWKRWLALALALVAVAWVRAEEELRSKSKICANVFCGAGRECAVT-EKGEPTCLCIEQCK
                                     : : .:: ::.:... : :.  : :.. ::
CCDS47 QPLMRLRHKEKNQESSRVKGFMIQDGPFGSCENKYCGLGRHCVTSRETGQAECACMDLCK
            40        50        60        70        80        90   

      60        70        80        90         100       110       
pF1KB5 PHKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHC--KEKKSVSPSASPVVCYQSN
        : .:::::.:. : ::::.:: :::  .:: . ..  :  :  :  .   : .  .  .
CCDS47 RHYKPVCGSDGEFYENHCEVHRAACLKKQKITIVHNEDCFFKGDKCKTTEYSKMKNMLLD
           100       110       120       130       140       150   

       120       130       140       150        160       170      
pF1KB5 RDELRRRIIQWLEAEIIPDGWFSKGSNYSEILDKYFKNFD-NGDSRLDSSEFLKFVEQNE
        .. .. :.:  : :  :.:  .  :  . ..:..:: :: .... .: .:. . ..:.:
CCDS47 LQN-QKYIMQ--ENEN-PNG--DDISRKKLLVDQMFKYFDADSNGLVDINELTQVIKQEE
            160            170       180       190       200       

        180       190       200       210       220        230     
pF1KB5 TAINITTYPDQENNKLLRGLCVDALIELSDENADWKLSFQEFLKCLNP-SFNPPE-KKCA
        .            : :    . .:.. .: ::: .:...:: . ..  ... :: .: .
CCDS47 LG------------KDLFDCTLYVLLKYDDFNADKHLALEEFYRAFQVIQLSLPEDQKLS
                   210       220       230       240       250     

          240       250       260       270       280       290    
pF1KB5 LEDETYADGAETEVDCNRCVCACGNWVCTAMTCDGKNQKGAQTQTEEEMTRYVQELQKHQ
       .   : ...:                                                  
CCDS47 ITAATVGQSAVLSCAIQGTLRPPIIWKRNNIILNNLDLEDINDFGDDGSLYITKVTTTHV
         260       270       280       290       300       310     

>>CCDS3802.1 FSTL5 gene_id:56884|Hs108|chr4               (847 aa)
 initn: 280 init1: 216 opt: 304  Z-score: 324.3  bits: 69.6 E(32554): 9.6e-12
Smith-Waterman score: 322; 30.5% identity (60.0% similar) in 220 aa overlap (31-244:65-266)

               10        20        30        40         50         
pF1KB5 MWKRWLALALALVAVAWVRAEEELRSKSKICANVFCGAGRECAVT-EKGEPTCLCIEQCK
                                     : : .:: ::.:... : :.  : :.. ::
CCDS38 PLMRLRHKQEKNQESSRVKGFMIQDGPFGSCENKYCGLGRHCVTSRETGQAECACMDLCK
           40        50        60        70        80        90    

      60        70        80        90         100       110       
pF1KB5 PHKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHC--KEKKSVSPSASPVVCYQSN
        : .:::::.:. : ::::.:: :::  .:: . ..  :  :  :  .   : .  .  .
CCDS38 RHYKPVCGSDGEFYENHCEVHRAACLKKQKITIVHNEDCFFKGDKCKTTEYSKMKNMLLD
          100       110       120       130       140       150    

       120       130       140       150        160       170      
pF1KB5 RDELRRRIIQWLEAEIIPDGWFSKGSNYSEILDKYFKNFD-NGDSRLDSSEFLKFVEQNE
        .. .. :.:  : :  :.:  .  :  . ..:..:: :: .... .: .:. . ..:.:
CCDS38 LQN-QKYIMQ--ENEN-PNG--DDISRKKLLVDQMFKYFDADSNGLVDINELTQVIKQEE
           160          170         180       190       200        

        180       190       200       210       220        230     
pF1KB5 TAINITTYPDQENNKLLRGLCVDALIELSDENADWKLSFQEFLKCLNP-SFNPPE-KKCA
        .            : :    . .:.. .: ::: .:...:: . ..  ... :: .: .
CCDS38 LG------------KDLFDCTLYVLLKYDDFNADKHLALEEFYRAFQVIQLSLPEDQKLS
      210                   220       230       240       250      

          240       250       260       270       280       290    
pF1KB5 LEDETYADGAETEVDCNRCVCACGNWVCTAMTCDGKNQKGAQTQTEEEMTRYVQELQKHQ
       .   : ...:                                                  
CCDS38 ITAATVGQSAVLSCAIQGTLRPPIIWKRNNIILNNLDLEDINDFGDDGSLYITKVTTTHV
        260       270       280       290       300       310      

>>CCDS34238.1 FSTL4 gene_id:23105|Hs108|chr5              (842 aa)
 initn: 232 init1: 232 opt: 299  Z-score: 319.1  bits: 68.6 E(32554): 1.9e-11
Smith-Waterman score: 328; 28.8% identity (61.5% similar) in 226 aa overlap (18-231:49-254)

                            10        20        30           40    
pF1KB5              MWKRWLALALALVAVAWVRAEEELRSKSKI---CANVFCGAGRECAV
                                     :  .: : :....   :.. ::. : .:..
CCDS34 AALGWMDPGTSRGPDVGVGESQAEEPRSFEVTRREGLSSHNELLASCGKKFCSRGSRCVL
       20        30        40        50        60        70        

            50        60        70        80        90       100   
pF1KB5 TEK-GEPTCLCIEQCKPHKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHCKEKKS
       ..: ::: : :.: :.:   :::::.:. : :::.::: ::: :..: : ..  :  : .
CCDS34 SRKTGEPECQCLEACRPSYVPVCGSDGRFYENHCKLHRAACLLGKRITVIHSKDCFLKGD
       80        90       100       110       120       130        

           110       120       130           140       150         
pF1KB5 VSPSASPVVCYQSNRDELRRRIIQWLEAEIIP----DGWFSKGSNYSEILDKYFKNFD-N
       .        : ...  .:.  ..  :.... :    :.  . .:.   .... :...: .
CCDS34 T--------CTMAGYARLKN-VLLALQTRLQPLQEGDSRQDPASQKRLLVESLFRDLDAD
              140       150        160       170       180         

      160       170       180       190       200       210        
pF1KB5 GDSRLDSSEFLKFVEQNETAINITTYPDQENNKLLRGLCVDALIELSDENADWKLSFQEF
       :...:.:::. . : ..           :. .. : :     :....: :.: .:...::
CCDS34 GNGHLSSSELAQHVLKK-----------QDLDEDLLGCSPGDLLRFDDYNSDSSLTLREF
     190       200                  210       220       230        

         220       230       240       250       260       270     
pF1KB5 ---LKCLNPSFNPPEKKCALEDETYADGAETEVDCNRCVCACGNWVCTAMTCDGKNQKGA
          .. .. :. : ..                                            
CCDS34 YMAFQVVQLSLAPEDRVSVTTVTVGLSTVLTCAVHGDLRPPIIWKRNGLTLNFLDLEDIN
      240       250       260       270       280       290        




308 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 13:11:01 2016 done: Sat Nov  5 13:11:01 2016
 Total Scan time:  2.610 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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