GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:08:51

Sequence gi568815597f:167622152_167887918 : 265767 bp : 43.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8092   8278  187  0  1  136   88    82 0.025  12.26
 1.02 Intr +  33287  33412  126  0  0  108   67    29 0.011   3.45
 1.03 Intr +  51707  51783   77  0  2   94   36    37 0.023  -1.67
 1.04 Intr +  61749  61850  102  2  0   87  105   164 0.758  18.37
 1.05 Intr +  63270  63359   90  2  0  111  107    24 0.925   6.79
 1.06 Intr +  67898  67969   72  1  0   63  111    49 0.944   4.30
 1.07 Intr +  71948  72151  204  1  0   87   94   124 0.931  12.30
 1.08 Intr +  74948  75691  744  1  0   84   92   358 0.824  27.45
 1.09 Intr +  90363  90468  106  2  1  108  101   -12 0.092   1.89
 1.10 Intr +  92262  92437  176  1  2   93   66    80 0.017   5.96
 1.11 Intr +  99962 100091  130  1  1  -12   84   141 0.000   3.97
 1.12 Intr + 143432 143598  167  0  2  105  103   112 0.969  14.08
 1.13 Intr + 150124 150337  214  0  1   71   75   122 0.988   7.49
 1.14 Intr + 151085 151217  133  0  1  106   86    54 0.878   6.70
 1.15 Intr + 152062 152101   40  1  1  100   83   -10 0.229  -2.07
 1.16 Term + 165669 165770  102  2  0  125   48   108 0.986   8.78
 1.17 PlyA + 167362 167367    6                               1.05

 2.25 PlyA - 170122 170117    6                               1.05
 2.24 Term - 184016 183897  120  2  0   60   43   100 0.457   1.17
 2.23 Intr - 188461 188375   87  1  0  -11   81   105 0.396   0.07
 2.22 Intr - 188762 188574  189  2  0   89   53    78 0.697   4.18
 2.21 Intr - 196116 195921  196  2  1   82  100    45 0.015   4.52
 2.20 Intr - 199990 199873  118  2  1  137   52     9 0.131   1.72
 2.19 Intr - 200972 200857  116  1  2  107  119    65 0.996  11.59
 2.18 Intr - 202421 202325   97  0  1   86   68     5 0.981  -2.63
 2.17 Intr - 202704 202500  205  0  1  122   82   247 0.966  26.27
 2.16 Intr - 207272 207116  157  1  1   73   91   -16 0.536  -2.79
 2.15 Intr - 211011 210836  176  0  2  113   86    96 0.601  10.64
 2.14 Intr - 211926 211819  108  0  0   74   94    59 0.625   5.58
 2.13 Intr - 214389 214158  232  2  1   28  103   166 0.780   9.88
 2.12 Intr - 215167 215098   70  2  1   96   80    38 0.777   2.04
 2.11 Intr - 223702 223412  291  2  0  108   25   329 0.868  25.71
 2.10 Intr - 224112 223834  279  1  0   78   92   145 0.972  11.35
 2.09 Intr - 226338 226210  129  1  0  104  116    36 0.992   8.67
 2.08 Intr - 232338 232202  137  2  2   95   89     1 0.973   1.11
 2.07 Intr - 234288 234014  275  0  2   75   99   260 0.988  22.14
 2.06 Intr - 237742 237656   87  1  0   57   99    34 0.714   1.57
 2.05 Intr - 238912 238720  193  0  1   83   93   165 0.792  15.99
 2.04 Intr - 256484 256295  190  0  1   81   65   141 0.379   9.74
 2.03 Intr - 258040 257964   77  0  2   53   69    68 0.860   0.56
 2.02 Intr - 258458 258340  119  2  2  110   81    39 0.983   4.66
 2.01 Intr - 261477 261286  192  0  0   58  115   196 0.720  18.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  82599  82676   78  2  0   91   49   101 0.919   4.26
S.002 Sngl - 100156  99941  216  1  0  104   51   203 0.879  11.38


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:167622152_167887918|GENSCAN_predicted_peptide_1|889_aa
GPRGRGSPAAERSRARATAHSPCARRSPKLATAGSGGDSGDRELRPGRAGASAAESAPEG
HGGVSYGVAVRKDRARHIISFVPEIIKKSPCYDLRVPSQTPSGQASCYLSFKTLRKHHFL
CEAFPDSPKQERPAETNANVDNSASPSVAQLAGRFREQAAAAKETPASKPTRRKPPCSLP
LFPPKVDLGQNGEEKSPPNASHPPKFKVKSSPLIEKLQANLTFDPAALLPGASPKSPGLK
AMVSPFHSPPSTPSSPGVRSRPSEAEEVPVSFDQPPEGSHLPCYNKVRTRGSIKRRPPSR
RFRRSQSDCGELGDFRAVESSQQNGAKEEDGDEVLPSKSKAPGSPLSSEGAAGEGVRTLG
PAEKPPLRRSPSRTEKQEEDRATEEAKNGEKARRSSEEVDGQHPAQEEVPESPQTSGPEA
ENRCGSPREEKPAGEEAEMEKATEVKGERVQNEEVGPEHDSQETKKLEEGAAVKETPHSP
PGGVKGGDVPKQEKGKEKQQEGAVLEPGCSPQTGPAQLETSSEVQSEPAVPKPEAWEIKT
TTNKNKQKTLESVYSAKIEVSTSIMFHTHARAPGRPPTLRVEQPGRARKPEGGFRERVRT
WRPRRRWGVGTAGPGKSRSLPAPPRCGAGRGGGGGDCSGWTMAASAGAGAVIAAPDSRRW
LWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQPE
GADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDVKN
PPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLYRRKNSKRD
YTGWKANPYKLCRTHVGPVIYAQLDHSGGHHSDKINKSESVVYADIRKN

>gi568815597f:167622152_167887918|GENSCAN_predicted_CDS_1|2670_bp
ggcccccgcggccggggcagtcccgcagccgagcgcagccgggcgcgcgccaccgcccac
tcgccctgtgcccgccgcagcccgaaactggccacggccgggagcggaggggacagcggg
gatcgtgagctccggcccgggcgagcgggtgcgtctgccgcagagtcggcacctgaagga
catggaggtgtttcctatggtgttgctgtcagaaaggacagagctcgtcacataatcagc
tttgttcctgagattatcaaaaagtctccctgctatgacctgcgtgtgccatcccaaacc
ccctctgggcaagcaagctgttatctgtccttcaagactctgcgtaaacatcacttcctc
tgtgaagcgttccctgattcacctaagcaggaaagaccggcagagaccaatgccaatgtg
gacaactcggcgtccccctcggtggcccagctggccgggcggtttagggagcaggcggct
gcagccaaggagacaccagccagtaaaccaacccgaaggaaaccgccctgttccctcccc
ctgttcccccccaaggtagacctgggccagaatggtgaggagaaatcaccacccaatgcg
agccaccctcctaaattcaaggtcaagagctcgcctctgattgagaagcttcaggccaat
ttaacctttgacccagctgctctactgcctggggcctcacccaagagtcctggactcaag
gctatggtgtcgccatttcacagcccaccttctacccccagcagccctggtgtgcgatct
aggcccagcgaggcagaggaggtgcctgtcagcttcgaccagccccctgaaggcagtcat
ctgccctgttacaacaaggtgcggacgaggggctcaataaaaaggcgccctccctccagg
cgattccgaaggtcacagtcagactgtggagaacttggagatttcagggcggtggagtca
tctcagcagaacggtgctaaggaagaggatggggatgaagtgttgccatccaagagcaag
gccccaggatcccctttgtccagtgagggagcagcgggagagggagtgagaaccctggga
cctgctgaaaagcctcctctgaggaggtcacccagcaggacagagaagcaggaggaggac
agggccacagaggaagccaagaacggtgaaaaggccaggcggagttcagaggaggtggac
ggccagcacccggcccaagaggaggtcccggaatcgccccagacctctggcccagaggca
gaaaataggtgtgggagccccagggaggaaaagccagctggagaggaagcagagatggaa
aaggctacagaggtgaagggggagagggtgcaaaatgaagaggtgggacctgaacatgac
agccaagaaacaaagaagctggaggagggagctgcagtgaaggagaccccccacagtccc
cctggaggagtgaagggcggagatgtccccaagcaggaaaaaggcaaggaaaaacaacag
gagggggcagtgctcgagccaggctgcagcccccagaccggccctgcccagctggagacc
agcagtgaggtccagagcgagccagcagtccccaagccggaggcttgggaaattaaaaca
acaacgaacaaaaacaaacaaaaaacccttgagagtgtatactcagcaaagatagaagtg
tccacctctatcatgttccacacacatgcccgggctcccgggcgcccgccaacactgcga
gtggaacagccggggcgagcccgtaagccggaaggcggcttccgggagcgcgtgcgaacg
tggaggccacgccggcgatggggggttggaacggccggaccaggcaaaagccggtccctc
cctgctcctccacgctgtggggcaggacgcggcggcggcggcggcgactgcagtggctgg
acgatggcagcgtccgccggagccggggcggtgattgcagccccagacagccggcgctgg
ctgtggtcggtgctggcggcggcgcttgggctcttgacagctggagtatcagccttggaa
gtatatacgccaaaagaaatcttcgtggcaaatggtacacaagggaagctgacctgcaag
ttcaagtctactagtacgactggcgggttgacctcagtctcctggagcttccagccagag
ggggccgacactactgtgtcgtttttccactactcccaagggcaagtgtaccttgggaat
tatccaccatttaaagacagaatcagctgggctggagaccttgacaagaaagatgcatca
atcaacatagaaaatatgcagtttatacacaatggcacctatatctgtgatgtcaaaaac
cctcctgacatcgttgtccagcctggacacattaggctctatgtcgtagaaaaagagaat
ttgcctgtgtttccagtttgggtagtggtgggcatagttactgctgtggtcctaggtctc
actctgctcatcagcatgattctggctgtcctctatagaaggaaaaactctaaacgggat
tacactggctggaaagctaacccatataagctatgtagaactcatgtgggcccagtcata
tatgcacagttagaccactccggcggacatcacagtgacaagattaacaagtcagagtct
gtggtgtatgcggatatccgaaagaattaa

>gi568815597f:167622152_167887918|GENSCAN_predicted_peptide_2|1279_aa
IDNKQLQGYLSELRPVTIVFVNLMFEDQDKAEEIGPAIQDAYMHITSVLKIFQGQINKVF
MFDKGCSFLCVFGFPGEKVPDELTHALECAMDIFDFCSQVHKIQTVSIGVASGIVFCGIV
GHTVRHEYTVIGQKVNLAARMMMYYPGIVTCDSVTYNGSNLPAYFFKELPKKVMKGVADS
GPLYQYWGRTEKVIIAISLNKISFHQTFYTIQMFMANVLGLDTCKHYKERQTNLRNKVMT
LLDEKFYCLLNDIFHVQFPISREISRMSTLKKQKQLEILFMKILKLIVKEERIIFIIDEA
QFVDSTSWRFMEKLIRTLPIFIIMSLCPFVNIPCAAARAVIKNRNTTYIVIGAVQPNDIS
NKICLDLNVSCISKELDSYLGEGSCGIPFYCEELLKNLEHHEVLVFQQTESEEKTNRTWN
NLFKYSIKLTEKLNMVTLHSDKESEEVCHLTSGVRLKNLSPPTSLKEISLIQLDSMRLSH
QMLVRCAAIIGLTFTTELLFEILPCWNMKMMIKTLATLVESNIFYCFRNGKELQKALKQN
DPSFEVHYRSLSLKPSEGMDHGEEEQLRELENEVIECHRIRFCNPMMQKTAYELWLKDQR
KAMHLKCARFLEEDAHRCDHCRGRDFIPYHHFTVNIRLNALDMDAIKKMAMSHGFKTEEK
LILSNSEIPETSAFFPENRSPEEIREKILNFFDHVLTKMKTSDEDIIPLESCQCEEILEI
VILPLAHHFLALGENDKALYYFLEIASAYLIFCDNYMAYMYLNEGQKLLKTLKKDKSWSQ
TFESATFYSLKGEVCFNMGQIVLAKKMLRKALKLLNRIFPYNLISLFLHIHVEKNRHFHY
VNRQAQESPPPGKKRLAQLYRQTVCLSLLWRIYSYSYLFHCKYYAHLAVMMQMNTALETQ
NCFQIIKAYLDYSLYHHLAGYKGVWFKYEVMAMEHIFNLPLKGEGIEIVAYVAETLVFNK
LIMGHLDLAIELGSRALQMWALLQNPNRHYQSLCRLSRCLLLNSRYPQLIQVLGRLWELS
VTQEHIFSKAFFYFVCLDILLYSGFVYRTFEECLEFIHQYENNRILKFHSGLLLGLYSSV
AIWYARLQEWDNFYKFSNRAKNLLPRRTMTLTYYDGISRYMEGQVLHLQKQIKEQSENAQ
ASGEELLKNLENLVAQNTTGPVFCPRLYHLMAYVCILMGDGQKCGLFLNTALRLSETQGN
ILEKCWLNMNKTGSLMNNRNLLLSFGSWKSKIKALEIRCLLRRDNDHRERAMMTMVVLSN
RKGGNVGKRKRDQIVIVSV

>gi568815597f:167622152_167887918|GENSCAN_predicted_CDS_2|3840_bp
attgataacaaacagcttcagggctatttatctgagcttcgcccagtgacgattgtgttt
gtgaacctgatgtttgaagaccaagacaaagcagaagagataggcccagccatccaggat
gcctatatgcacatcacttctgtcctgaagatcttccaaggccaaatcaataaagtcttc
atgtttgacaagggctgctctttcctctgtgtctttggcttccctggggaaaaggtacct
gacgagctcactcatgctctggaatgtgctatggatatatttgacttctgctctcaagtc
cacaaaatccaaactgtatccatcggtgttgccagtgggattgtcttctgtgggatcgtt
ggacacactgtgagacacgagtacacagtcattggtcaaaaagtcaacttagctgccagg
atgatgatgtactacccaggaattgtgacctgcgactctgtcacctacaatgggagcaac
ctaccagcgtacttttttaaagagcttccaaagaaagttatgaaaggtgttgcagattct
ggaccattgtatcagtattggggccgtactgagaaagtgattattgccatttcattgaat
aagatcagcttccatcaaactttctataccatccagatgttcatggccaatgtcctaggc
ctagacacttgtaaacattataaagaacgacagaccaaccttcgaaataaagtcatgaca
ctgttggatgaaaagttctactgtcttcttaatgacattttccatgttcagttccctatt
tctcgggagatttccaggatgagcaccttgaaaaagcaaaaacaattggaaatattgttt
atgaagatcttgaagctgatagtgaaagaggaaaggattatttttatcattgatgaggcc
cagtttgtggattcgacctcctggagatttatggagaagcttatccggactcttcctatc
ttcatcattatgtccctgtgtcccttcgttaacattccctgtgcagctgccagggccgta
ataaagaacaggaacaccacctacattgtcattggtgcagtacagcctaacgacatctcc
aacaagatctgtcttgacctcaatgtgagctgcatctccaaagaactggactcgtacctg
ggggagggaagctgtgggattccattttactgtgaagaattgcttaaaaacctggaacat
catgaggtactcgttttccaacaaacggagtctgaggaaaagacaaataggacctggaat
aacctgttcaagtattccattaagctaacagagaagttaaacatggttactctccatagt
gataaggaaagtgaagaagtctgtcacctcacaagtggtgtcagactgaaaaacctgtca
cctccaacgtcattaaaagaaatctctctgatccagctggatagcatgagactttcccac
caaatgctggtgagatgtgctgccatcattggcctgaccttcaccactgagttgttgttt
gagattctcccctgttggaatatgaagatgatgatcaagaccctggcaaccctagtggaa
tctaacattttttattgtttccggaatggcaaggagcttcaaaaggccctgaaacagaat
gatccctcatttgaggtgcactatcgttccttgtctctgaagcccagtgaagggatggat
cacggtgaagaggaacagcttcgtgaactggagaatgaggtgatcgagtgccacaggatt
cgattctgtaaccctatgatgcagaaaacagcctacgagctgtggctcaaggaccagaga
aaagccatgcacttgaaatgtgcccgctttttagaagaagatgcccacagatgtgaccac
tgccgaggcagggacttcattccctatcatcacttcacagtgaatattcggctcaacgct
ttagacatggatgccattaaaaagatggctatgtctcatggatttaaaactgaagaaaag
cttatcttgtccaactcagagattcctgagacatctgcattttttcctgaaaatcgcagt
cctgaagaaataagagaaaagatcttgaatttctttgaccacgttttaacaaaaatgaag
acatctgacgaagacattatccctctggaatcttgccagtgtgaagaaatcctagagatt
gtcatcttgcctctggcccaccattttctggctttgggagaaaatgacaaagccttatat
tacttcttagaaattgcatctgcttatctcatcttttgtgataactacatggcatacatg
tatttgaatgaaggacagaagttgctaaaaactctcaagaaggacaaatcttggagccag
acatttgagtctgccaccttttacagcctcaaaggtgaggtctgtttcaatatgggccag
atagtgcttgccaagaaaatgctgaggaaggcactgaagctcctcaaccgaatctttcct
tacaacttaatctccttgtttctccatatccatgtcgagaaaaacagacactttcattat
gtgaatcggcaggcccaagagagcccacctccagggaagaagaggctggcacaactttac
cggcaaactgtctgcctttccttgctgtggcgcatctatagctacagttatctttttcac
tgcaagtattatgcccacctggcagttatgatgcaaatgaatactgcactggaaactcaa
aattgtttccagatcattaaggcttacctagactattcgctataccaccacctggctggc
tacaaaggtgtgtggttcaaatatgaagtcatggccatggagcacatcttcaacctcccc
ctgaaaggcgagggcattgaaatcgtggcatacgtggctgagacactggtcttcaacaag
ctcataatgggacacctggatttggccattgagttaggctcccgagcccttcagatgtgg
gcactgctccagaatcccaaccgacattatcagtccctctgcagacttagcagatgtctc
cttctgaacagcagatacccgcaattgatccaggtgctggggcggctgtgggagctttct
gtaacacaggaacacatcttcagcaaggcatttttctattttgtctgcttggacatcctg
ctttattctggttttgtttatagaacatttgaagaatgtttggaattcatacaccaatac
gaaaacaacagaatcctcaagttccacagtggactcctcctgggactttattcctctgta
gctatctggtatgccagacttcaggaatgggacaacttttacaaattttccaatagagct
aaaaatcttttgccaagaagaaccatgacacttacttactatgacggaatatctaggtac
atggaggggcaagttcttcaccttcaaaaacaaatcaaagaacagtcagagaatgcccaa
gccagtggggaggagctactcaagaacttggagaatctggtggctcaaaataccactggc
cctgtcttttgcccaaggctctaccacctgatggcttacgtctgtatattaatgggagat
gggcagaaatgtggcctcttcctgaacacagccttgcggctctctgaaacacaggggaat
atactggagaaatgctggctgaacatgaacaaaactgggtcattgatgaacaatagaaac
ctactgctcagttttggaagctggaagtccaagatcaaggctctggagattcgctgtctg
ctccgaagagacaacgaccatcgagaacgggccatgatgacgatggtggttttgtcgaat
agaaaagggggaaatgtggggaaaagaaagagagatcagattgttattgtgtctgtgtag