GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:07:12

Sequence gi568815593f:21782587_21984309 : 201723 bp : 35.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1183   1304  122  0  2   75   48    69 0.331   1.31
 1.02 Term +   2994   3162  169  0  1   29   49   161 0.567   2.67
 1.03 PlyA +   4538   4543    6                               1.05

 2.00 Prom +  11736  11775   40                              -3.35
 2.01 Init +  14576  14662   87  1  0   33   24   276 0.994  16.39
 2.02 Intr +  19607  19780  174  1  0   57   53   262 0.458  18.81
 2.03 Term +  33609  33674   66  2  0  117   39   104 0.272   5.36
 2.04 PlyA +  34039  34044    6                              -0.45

 3.06 PlyA -  34301  34296    6                               1.05
 3.05 Term -  34546  34320  227  2  2   63   38   230 0.944  11.46
 3.04 Intr -  59742  59575  168  1  0   77   53   176 0.493  12.00
 3.03 Intr -  72187  72085  103  1  1   50   99   113 0.163   7.43
 3.02 Intr -  77127  76996  132  0  0   35  101   121 0.757   8.02
 3.01 Init -  80728  80690   39  1  0   75   69    65 0.409   3.56
 3.00 Prom -  84073  84034   40                              -6.35

 4.00 Prom +  85433  85472   40                              -6.55
 4.01 Init +  88452  88519   68  2  2   63   92    49 0.039   3.40
 4.02 Intr +  99988 100129  142  1  1   64   28   197 0.007  10.73
 4.03 Intr + 100134 100593  460  2  1  -11    0   585 0.167  31.63
 4.04 Term + 100705 101726 1022  2  2   11   35  1110 0.466  89.28
 4.05 PlyA + 101944 101949    6                               1.05

 5.04 PlyA - 103285 103280    6                               1.05
 5.03 Term - 109763 109677   87  2  0   71   40    93 0.111  -0.52
 5.02 Intr - 113265 112991  275  1  2   60   59   141 0.017   4.73
 5.01 Init - 127757 127682   76  2  1   66   73    43 0.018   1.90
 5.00 Prom - 135480 135441   40                              -3.55

 6.00 Prom + 146380 146419   40                              -4.55
 6.01 Sngl + 165344 165763  420  1  0   57   38   208 0.954   8.75
 6.02 PlyA + 166535 166540    6                               1.05

 7.04 PlyA - 166586 166581    6                               1.05
 7.03 Term - 169367 169263  105  2  0   70   49    76 0.064  -0.67
 7.02 Intr - 183716 183664   53  0  2   94  116    -4 0.017   0.71
 7.01 Intr - 192799 192505  295  1  1  110   92   369 0.552  35.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  35651  35612   40  2  1   88  111    11 0.926   3.80
S.002 Init +  83686  83896  211  0  1   49   57   172 0.833   9.19
S.003 Term +  86415  86536  122  1  2  101   48    74 0.845   2.36
S.004 Init + 130085 130146   62  1  2   74  100    37 0.844   4.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_1|96_aa
MSFLNLLNIKTFSSSKKFLNSGYDCVNGVERSTGNNYKEPRETLAVWIEDKASHNIPLSQ
SLTQNIALAVFCSMKVERSKETAEEKCELAELVHEV

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_1|291_bp
atgagtttccttaacctgctgaatattaaaactttttcaagcagtaaaaaattccttaac
agtggctatgactgtgtaaatggggttgagagaagcactggaaacaactacaaagaaccc
agagaaactttagcggtctggatagaagataaagccagtcacaacattcctttaagccaa
agtctaacccagaatatagccctagctgtcttctgttctatgaaggtggagagaagtaag
gaaactgcagaagaaaagtgtgagctagcagagttggttcatgaggtttaa

>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_2|108_aa
MWLFAVLSDDDDDDDDDEDDEDDDDKIPKVLSSDSANDGPYRSVFINLHGVERLAENRWL
IYVQHADLHRSCVFERARRVKPVVKVKPTQCEDDEDEDLYDDPLVLNK

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_2|327_bp
atgtggctctttgctgtgcttagtgatgatgatgatgatgatgatgatgatgaagatgat
gaagatgatgatgataaaatacccaaggtcttgagcagtgacagcgccaatgatggtccc
taccggagtgtcttcataaacctccatggtgtagagcggcttgctgaaaaccggtggctc
atctacgtccagcacgctgatcttcaccgtagctgtgtctttgaaagggcccgccgagtg
aaaccggtggtcaaggtgaagcctactcaatgtgaagatgatgaggatgaagacctttat
gatgatccactagtgcttaacaaatag

>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_3|222_aa
MDLDINGEANVLQFNGIIVVSPGVSISPSGTKTTRPAECNVAETGSKKFASGSLGVMVKA
TDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKDMGG
QLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEI
EYNIVPGDGGNLFDIVTDEDTQEGVIKLKKVYRQMLGQLTTK

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_3|669_bp
atggacctggacatcaacggtgaggcaaatgtcctccagtttaatggaatcattgttgta
tctcctggtgtcagcatttctccctctggaactaagactactaggccagcagaatgtaat
gtcgcagaaacaggaagcaagaagtttgctagtggatcactaggggtgatggtcaaggcc
acagatgcagatgacccgacctatggaaacagtgccagagtcgtttacagcattcttcag
ggacaaccttatttctctattgatcccaagacaggtgttattagaacagctttgccaaac
atggacagagaagtcaaagaacaatatcaagtactcatccaagccaaggatatgggagga
cagcttggaggattagccggaacaacaatagtcaacatcactctcaccgatgtcaatgac
aatccacctcgattccccaaaagcatcttccacttgaaagttcctgagtcttcccctatt
ggttcagctattggaagaataagagctgtggatcctgattttggacaaaatgcagaaatt
gaatacaatattgttccaggagatgggggaaatttgtttgacatcgtcacagatgaggat
acacaagagggagtcatcaaattgaaaaaggtatatagacaaatgttgggacagttgact
actaaataa

>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_4|563_aa
MTNNTNSWALIRQFNLIVLQCDSRPTEMLRLPTVFRQMRPVSRVLAPHLTRAYAKDVKFG
ADARALMLQGVDLLADAVAVTMEPKGRTVIIEQSWGSPNVTKDGVTVAKSIDLKDKYKNI
GAKLVQDVANNTNEESGDGTTTATVLAGSIAKEGFQKISKGANPVEIRRGVMLAVDAVIA
ELKKQSKPVTTPEEIAQVAMISANGDKEIGNIISDAMKKVGRKGQKCEFQDAYVLLSEKK
ISSVQSIVPALEIANAHHKPLVIIAEDVDGEALSTLILNRLKVGLQVVAVKAPGFGDNRK
NQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQLEKR
IQEIIGQLDVTTSEYEKEKLNEWLAKLSDGVVVLKFGGTSDVEVNEKKDRVTDALNATRA
AVEGGIVLGGGFALLRCIPALDSLTPANEDQKIGMEIIKRTLKIPAMTTATNAGVEGSLI
VEKIMQNSSEVGYDAMVGDFMNMVEKGIIDPTKLVRTALLDAAGVASLLTTAEVVVTEIP
KEEKDPGMGAMGGMGGGMGGGMF

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_4|1692_bp
atgactaacaacaccaattcttgggctctcatcagacagtttaatttaattgttcttcag
tgtgacagccgccccacagaaatgcttcggttacccacagtctttcgccagatgagacca
gtgtccagggtactggctcctcatctcactcgagcttatgccaaagatgtaaaatttggt
gcagatgcccgagccttaatgcttcaaggtgtagaccttttagccgatgctgtggccgtt
acaatggagccaaagggaagaacagtgattattgagcagagctggggaagtcccaacgta
acaaaagatggtgtgactgttgcaaagtcaattgacttgaaggataaatataaaaacatt
ggagctaaacttgttcaagatgttgccaataacacaaatgaagaatctggggatggcact
accactgctactgtactggcaggctctatagccaaggaaggcttccagaagattagcaaa
ggtgctaatccagtggaaatcaggagaggtgtgatgttagctgttgatgctgtaattgct
gaacttaaaaagcagtctaaacctgtgaccacccctgaagaaattgcacaggttgctatg
atttctgcaaatggagacaaagaaattggcaatatcatctctgatgcaatgaaaaaggtt
ggaagaaagggtcagaaatgtgaattccaggatgcctatgttctgttgagtgaaaagaaa
atttctagtgtccagtccattgtacctgctcttgaaattgccaatgctcaccataagcct
ttggtgataatcgctgaagatgttgatggagaagctctaagtacactcatcttgaatagg
ctaaaggttggtcttcaggttgtggcagtcaaggctccagggtttggtgacaatagaaag
aaccaacttaaagatatggctattgctactggtggtgcagtgtttggagaagaggggttg
accctgaatcttgaagatgttcagcctcatgacttaggaaaagttggagaggtcattgtg
accaaagacgatgccatgctcttaaaaggaaaaggtgacaaggctcaacttgaaaaacgt
attcaagaaatcattgggcagttagatgtcacaactagtgaatatgaaaaggaaaaactg
aatgaatggctggcaaaactttcagatggagtagttgtgctgaagtttggtgggacaagt
gatgttgaagtgaatgaaaagaaagacagagttacagatgcccttaatgctacaagagct
gctgttgaaggaggcattgttttgggagggggttttgccctccttcgatgcattccagcc
ttggactcattgactccagctaatgaagatcaaaaaattggtatggaaattattaaaaga
acactcaaaattccagcaatgaccactgctacgaatgcaggtgttgaaggatctttgata
gttgagaaaattatgcaaaattcctcagaagttggttatgatgctatggttggagatttt
atgaatatggtagaaaaaggaattattgacccaacaaagcttgtgagaactgctttattg
gatgctgctggtgtggcctctctgttaactacagcagaagttgtagtcacagaaattcct
aaagaagagaaggaccctggaatgggtgcaatgggtggaatgggaggtggtatgggaggt
ggcatgttctaa

>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_5|145_aa
MGPDDILGASEFDVLDARLLLTFLLCLGDLPICTLMHSYLKEASFLLIFTFNHEGYYLGT
WAGLDSLQNGRIQLQSLTGWGAVAPLGSDTLLVAQGCLTSAAELSPEKEKRSCVANKESS
YQTTRQLITMIDNHITLSLAEHLHD

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_5|438_bp
atgggtcccgatgacatccttggagcttctgaatttgatgttcttgatgccaggctgttg
ctgacttttttgttatgcctgggggatcttcctatctgtaccctcatgcacagttatttg
aaggaagccagtttcctgctgatctttaccttcaatcatgaaggctactacctgggcact
tgggcagggctagattctctccagaatggtagaattcaactccagtccctgactgggtgg
ggggcagtggctcctctgggctctgacacacttcttgtggcacaaggctgtctaacatca
gcagctgagctgagccctgagaaagaaaagcgcagctgtgtggctaacaaggaaagttca
tatcaaacaacaagacagctcatcaccatgattgataaccacatcactctgagccttgcc
gaacatctacatgactaa

>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_6|139_aa
MYSSPVDSEGASPKPWRIPYDVGPEGTQKSRIQVWKPLPRFHRLYGNAWMSRPRLAAGVE
PSWRTSARVVQKGNVGLELPHRVPTGALPSEAVRRGPLFSRPLNGRSTNSLYCAPGKATD
TQCQPVKELPKAMGAHPLH

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_6|420_bp
atgtacagctcacctgttgattcagagggtgcaagccccaagccttggaggattccatat
gatgttgggcctgagggtacacagaagtcaagaattcaggtgtggaaacctctgcctaga
tttcacaggttgtatggaaatgcctggatgtccaggccgagattggctgcaggggtggag
ccatcatggagaacctctgctagggtagtgcagaagggaaatgtggggttggagctccca
cacagagtccccactggggcactgcctagtgaagctgtgagaagagggccactgttctcc
agacccctgaatggaagatccaccaacagcttgtactgtgcacctggaaaagccacagac
actcaatgccagcctgtgaaggaactgcccaaggccatgggagcccaccccttgcattaa

>gi568815593f:21782587_21984309|GENSCAN_predicted_peptide_7|150_aa
LHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDREEKPFYTLRAQAVDIETR
KPLEPESEFIIKVQDINDNEPKFLDGPYVATVPEMSPVEKYVDPLHSGLSLREEIKFSSN
RNKQTLFKSFSSLNEDVPRVGVDELSLTLA

>gi568815593f:21782587_21984309|GENSCAN_predicted_CDS_7|453_bp
ctccattccgacttagacaagggagagggcactgtgaaatacaccctctcaggagatggc
gctggcaccgtttttaccattgatgaaaccacaggggacattcatgcaataaggagccta
gatagagaagagaaacctttctacactcttcgtgctcaggctgtggacatagaaaccaga
aagcccctggagcctgaatcagaattcatcatcaaagtgcaggatattaatgataatgag
ccaaagtttttggatggaccttatgttgctactgttccagaaatgtctcctgtggaaaag
tatgttgacccattacatagtggattgagtttgagagaggagattaagttcagttctaac
aggaataaacagacgctattcaaaagcttttcaagtctgaatgaagatgtacctagggtt
ggtgttgatgaactttccctcactcttgcttaa