GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:49:04

Sequence gi568815582r:49179407_49381465 : 202059 bp : 43.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4686   4826  141  2  0   53   31    91 0.003   0.45
 1.02 Intr +  20841  20928   88  2  1   98   81    65 0.887   6.34
 1.03 Intr +  26556  26647   92  1  2   73  115   -15 0.120  -0.59
 1.04 Intr +  33783  33942  160  2  1   46   97    57 0.614   1.96
 1.05 Intr +  34749  34957  209  1  2   23   96    98 0.542   2.90
 1.06 Term +  37412  37522  111  1  0   81   37    99 0.777   2.66
 1.07 PlyA +  39017  39022    6                               1.05

 2.00 Prom +  41238  41277   40                              -4.06
 2.01 Init +  48745  48764   20  0  2   84   60    38 0.537   0.10
 2.02 Intr +  51480  52234  755  0  2   54   72   242 0.371  10.31
 2.03 Term +  56607  56764  158  1  2   48   38   102 0.465  -0.70
 2.04 PlyA +  56823  56828    6                               1.05

 3.00 Prom +  72100  72139   40                              -4.26
 3.01 Init +  84806  84881   76  1  1   50   77    74 0.426   4.00
 3.02 Intr +  92102  92224  123  0  0   70  108    45 0.638   5.26
 3.03 Intr +  92955  93131  177  1  0   56   41    94 0.501   1.39
 3.04 Term +  99188  99282   95  0  2   61   33   148 0.765   4.59
 3.05 PlyA +  99676  99681    6                               1.05

 4.11 PlyA -  99773  99768    6                               1.05
 4.10 Term - 100195  99998  198  1  0   98   42   239 0.991  17.70
 4.09 Intr - 101636 101517  120  2  0  122   76   169 0.897  19.79
 4.08 Intr - 101993 101796  198  2  0   31  109   344 0.001  30.35
 4.07 Intr - 102411 102195  217  2  1   81   34   249 0.001  17.31
 4.06 Intr - 103198 103082  117  0  0   71  101    88 0.991   7.98
 4.05 Intr - 104175 104135   41  0  2   93   78    35 0.389   0.02
 4.04 Intr - 115944 115805  140  1  2  121   60    57 0.429   6.38
 4.03 Intr - 133423 133309  115  1  1    0   94    62 0.001  -1.98
 4.02 Intr - 146180 146104   77  0  2   86   84    40 0.248   2.63
 4.01 Init - 148432 148309  124  1  1   58   81    65 0.272   3.13
 4.00 Prom - 158304 158265   40                              -2.46

 5.00 Prom + 164830 164869   40                              -6.66
 5.01 Init + 165114 165216  103  2  1   93   92    91 0.929   8.68
 5.02 Intr + 167849 167949  101  0  2   89   63     6 0.662  -1.97
 5.03 Term + 168634 168732   99  0  0  125   36    77 0.670   4.33
 5.04 PlyA + 169017 169022    6                               1.05

 6.00 Prom + 174927 174966   40                              -1.66
 6.01 Init + 179327 179549  223  1  1   97   27   128 0.484   6.32
 6.02 Term + 185906 186033  128  0  2  118   38    53 0.487   1.74
 6.03 PlyA + 187235 187240    6                               1.05

 7.00 Prom + 189649 189688   40                              -3.86
 7.01 Init + 194534 194683  150  1  0   59   90   122 0.898   9.54
 7.02 Intr + 198325 198444  120  0  0  105   95   128 0.998  15.89
 7.03 Term + 199064 199246  183  1  0   80   43   178 0.603  10.04
 7.04 PlyA + 199845 199850    6                               1.05

 8.02 PlyA - 200971 200966    6                               1.05
 8.01 Sngl - 202011 201214  798  0  0   60   31   312 0.862  18.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   5022   4891  132  0  0  125   39    63 0.921   3.19
S.002 Init - 102059 101796  264  2  0   88  109   596 0.990  56.71
S.003 Term - 102411 102189  223  2  1   81   36   260 0.997  16.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_1|266_aa
DLQAPEEEADSIYPGLGCAQVVAAGGSESEQQRPLLVYTFTTPGDSELGNDQAIAGRLKG
VLCQLAQHADDNTSLGGNREWGKGEKQRGCKIENLKGLLRNGSENSMSVALGSREALQAQ
SKATGIGKQDEKKDQVRIQIKPNTLGIFLEEMGCGLPAGEGRENRKRKRPKAEESLDYLR
NSNNSNENWCGWIRVGEKIMSRSSEEPVSTALKIMVYIMHDENMSKYFGQEPEEKEGERL
REAEIKEPGREPFKRRKKKGKSQHEF

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_1|801_bp
gatctgcaagctccagaggaggaagcagacagtatctacccaggccttgggtgtgcccag
gtggttgctgctgggggtagcgagagtgagcagcagcggccccttttggtgtatacattt
actacacctggtgattctgagctgggaaatgaccaagctattgcagggagactaaaggga
gtgctttgccagctggctcagcacgccgatgacaacacctctcttggcgggaacagagag
tggggaaaaggagaaaaacagagggggtgtaagatagaaaatttaaaaggattgctacga
aatggaagcgaaaacagcatgtctgtagcactggggagtagagaagccctccaagcacag
agtaaagccactgggattgggaaacaggatgagaagaaagatcaagtcagaattcaaatc
aagcccaacacactgggaatctttctggaggaaatgggatgtggccttcctgcaggagaa
ggcagagaaaatagaaagcgtaaacgccctaaggcagaagaaagcctggattatttgagg
aatagcaacaacagcaatgaaaactggtgtggatggatcagagttggggagaagattatg
tcaagaagcagtgaggaacccgtaagtacggccttaaagatcatggtttatatcatgcat
gatgagaacatgtcaaagtattttgggcaggagcctgaagagaaggagggagaaagactg
agagaagcagagatcaaagaaccaggaagagagccatttaaaaggaggaagaagaaaggc
aagagccagcatgagttctga

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_2|310_aa
MSDTEDSAIKLELRVKKLTQNFSATWKLNNLLLNDYWVHNETKVEIKVFFETNENKDTTY
QNLWDTFKAVCRGKFIALNTHKRKQQRSKIDTLTSQLKELEKQEQTYSKASRREEITKIR
AELKEIETQKTLQKINESRSWFFEKINKINRPLARLIKKKREKNQIDTIKNDKGDITTNP
TQIQTTIREYYKHLYTNKLENLEEMDEFLHTYALPRLNQEEFESLNRPITGSEIEAIINS
LPTKKVQDQMDSQLNSIRGLLNNISKAIKPSFQEDASGSAVSGWESQPNYFQLVVNCGKV
DFTSLNFSSH

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_2|933_bp
atgagcgacacagaagacagcgcaatcaaactagaactcagggttaagaagctcactcaa
aacttctcagctacatggaaactgaacaacctgctcctgaatgactactgggtacataat
gaaacgaaggtagaaataaaggtgttctttgaaaccaatgagaacaaagacacaacatat
cagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaaatacc
cacaagagaaagcagcaaagatctaaaattgacaccctaacatcacaattaaaagaacta
gagaagcaggagcaaacatattcaaaagctagcagaagggaagaaattactaagatcaga
gcagaactgaaggagatagagacacaaaaaacccttcaaaaaatcaatgaatccaggagc
tggttttttgaaaagatcaacaaaattaatagaccgctagcaaggctaataaagaagaaa
agagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccaccaatccc
acacaaatacaaactaccatcagagaatattataaacacctctacacaaataaactagaa
aatctagaagaaatggatgaattcctgcacacatacgccctcccaagactaaaccaggaa
gaatttgaatccctgaatagaccaataacaggctctgaaattgaggcaataattaatagc
ctaccaaccaaaaaagtccaggaccagatggattcacagctgaattctatcagaggacta
cttaacaacatcagcaaagcaattaagcccagttttcaggaagatgccagcggctctgca
gtgtctggatgggagtctcagcccaattatttccagctagttgtgaactgtggaaaagtg
gactttacttcattaaacttcagttcccactga

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_3|156_aa
MPLKPMLLISIYTALSLFVHGTYGLETGTYLGNQGKQLQTSQPQRAPLSLTLMQEVIEAY
MLVNLPREPKAMMGFQSSFCFQPEQKPSDLMAIHEQGITSPLIGQDPVWLLFTSGQCAST
MGKPAEEEEASGRSSLAFRGVTEHDGIDKHQNIKQP

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_3|471_bp
atgcctctaaagcccatgctcctgatcagtatttatactgccttgtccctcttcgttcat
gggacctatgggctagagacagggacatatttaggcaatcaaggaaaacagctgcaaact
tcacagcctcaaagagcaccactgtcactcactttgatgcaggaggttattgaggcctac
atgctggtgaacctgccaagagaacccaaagctatgatgggatttcagagttcattctgc
ttccagccagaacaaaaacccagtgaccttatggccatccatgaacaaggaattaccagc
cccctcattggccaagaccctgtatggctactttttacatctggccagtgtgccagtacc
atgggaaagcctgctgaggaagaggaggcgtccggaagaagctccttggcgtttcgtgga
gtcacagagcacgacggcattgacaagcatcagaacatcaagcagccttag

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_4|448_aa
MKWIGAFVKAHPRSEIIDHSMLTTAPALFLLNHKWATLQKEGGDEREKAHAYDKSLWFAF
PRCFYYSQADPTPCSLTPLCRHRHRVPRCVCKLLFSRQIFCWGLTGWGGALEHKEELKNI
PVTYKAEKRETSGDKTNHPFDIWLALPITALGRPWPAVLNGGGGRRAVAGEAGESERPSS
TIAAAGWGRGTRRHSAPRLRTESPRAGCINNSERRRRRQRRVRAGGGGSSGTEQQRLCIQ
VRLGSRGTPEAREGLREHSAEGTLVAEGTLVPECEEENETEPIVLEGKCLVVCDSNPTSD
PTGTALGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFI
APRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGD
RAYLKLERGNLMGGWKYSTFSGFLVFPL

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_4|1347_bp
atgaagtggataggagcatttgtcaaggcccacccacgctcagaaatcatcgatcacagc
atgctgaccactgctcctgcactctttctcctgaatcacaaatgggccactctgcagaaa
gaaggcggagatgagagggaaaaagctcatgcctatgataaaagcctatggtttgctttt
ccacgatgtttctattacagtcaagctgacccaacgccctgctcgctgactcctttatgc
cggcaccggcaccgagtgccacgctgcgtttgcaagctattgttcagcaggcagattttc
tgctgggggttaacaggttggggaggtgctttagaacataaggaggaactaaagaatatt
cctgttacatacaaggcagagaaaagggaaactagtggtgacaagacaaatcatcccttt
gacatttggctggctctacctattacagctctggggcgaccctggccggccgtgctcaac
gggggcgggggtcggagagcagtcgctggagaggcgggagagagcgagaggccaagctcc
accatcgcggccgccggctggggcagagggacacggagacactcggcgccccggctccgc
accgagtccccgcgcgccggctgcatcaataattcagagcggcggcggcggcggcagcgg
cgggtgcgggcaggaggcggcggcagcagcgggaccgagcagcagcggctatgcatccaa
gtgcggctgggcagccgcggcacccctgaggcccgggaggggctccgggaacacagcgcg
gaggggacgctagtcgcggaggggacgctagtcccggagtgcgaggaagagaatgagacg
gagcccatcgtgctggagggcaagtgcctggtggtgtgcgactccaaccccacgtccgac
cccacgggcactgccctgggcatctctgtgcgctctggcagcgccaaggtggctttctct
gccatcaggagcaccaaccacgagccgtccgagatgagtaatcgcaccatgatcatctac
ttcgaccaggtactagtgaacattgggaacaactttgattcagaacgcagcactttcatc
gccccgcgcaaagggatctacagttttaacttccacgtggtaaaagtctacaacagacaa
accatacaggtgagcctcatgctaaacgggtggccggtgatttcagccttcgctggtgac
caggacgtgacccgggaggccgccagcaacggagtcctaatccaaatggagaaaggcgac
cgagcatacctcaagctggagcggggaaacttgatggggggctggaagtactcgaccttc
tccggattcctggtgtttcctctctga

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_5|100_aa
MRKGLAIPCASAGRPAQVPTPLREQTQLSPNLNAGGSLHGSKWPPEAPDTSFYQQPQENF
SFSVKSHKEKIYNFHQITQGDFILKRLKTTNINFDSYGHL

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_5|303_bp
atgaggaaggggcttgccatcccctgtgccagtgcgggaagaccagcccaagtgcccacc
ccactgcgggagcagactcagctgtccccaaacctgaatgcaggtggctcccttcatggg
tcaaagtggccaccagaagctccagatacatctttttatcaacagccccaggagaacttc
tctttctcagtaaaatcccacaaggaaaaaatctacaactttcatcaaattactcaggga
gactttattctaaagagactgaaaacgaccaacatcaattttgactcctatgggcatctg
taa

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_6|116_aa
MEYQGELNTWAHTLQRETRVMLCVPCTEKMNACAGSLRNSSGTAKSQIRNWRRVGAKKLS
SSRETQTQGVEGLGGSIGGGFEPRKNAIFGVIKSKAHTTHSTIANKSRDKVLGQGK

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_6|351_bp
atggaataccagggggagctgaacacgtgggctcacacgctacagagggagacccgtgtg
atgctatgtgtcccatgcactgaaaagatgaatgcttgtgctgggtcactgagaaactcc
tctggcacagcaaaatcgcagattcggaattggaggcgagtgggtgctaagaaactgagc
agcagcagggaaactcagactcagggagtggaggggcttggggggagtattgggggagga
tttgaaccaagaaaaaatgcaatttttggtgtcatcaagtccaaagctcataccactcac
agcacaatagccaataagtcaagagacaaggtcttggggcaaggaaagtga

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_7|150_aa
MSEQQMDLKDLMPTKRKYMWKTAEDRRMSDLTCVLEWLERRQGKKKQAPEKQKPKVVTVL
KRNKKKEEKKGKGLMTARGGNRRDTETSQQALGKRFRKDAASYRSLYGVEQKGKHLSMVP
GSYIKDGPKKSGKGKTLAPATRILLHNLLL

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_7|453_bp
atgtcagagcaacaaatggacctgaaggatttaatgcccacaaagaggaaatacatgtgg
aagactgctgaagataggcgcatgtctgacctcacctgtgtgctggagtggctggagcgg
aggcaggggaagaagaaacaagctcccgagaagcaaaagcccaaagtggtgacagtcctt
aaacgaaataagaagaaggaagagaagaaaggcaaaggcctcatgacagcacggggaggg
aaccgcagggacacggagacttcccagcaggccttaggaaagagattcaggaaggacgcc
gcctcctaccgaagcctctatggagtggagcaaaaggggaaacacctcagcatggtccct
ggcagctacatcaaggatggccccaagaaatctggtaagggaaaaaccttggccccggcc
accagaatcctgctccataatctcctcctctag

>gi568815582r:49179407_49381465|GENSCAN_predicted_peptide_8|265_aa
MSELPFTIASKRIKYLGIQLTKDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KMAILPKVNYRFNAIPIKLPMPFFTQLEKTTLKFIWNQKTARIAKSILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKSEKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKD
FMSKTPKAMATEAKIDKWDLIKLKM

>gi568815582r:49179407_49381465|GENSCAN_predicted_CDS_8|798_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatatctaggaatccaactt
acaaaggatgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatattgtg
aaaatggccatactgcccaaggtaaattacagattcaatgccatccccatcaagctacca
atgcctttcttcacacaattggaaaaaactactttaaagttcatatggaaccaaaaaaca
gctcgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaac
tatctgatctttgacaaatctgagaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggcttgccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaacc
ataaaaaccctagaagaaaacttaggcattaccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacagaagccaaaattgacaaatgggatcta
attaaactaaagatgtaa