GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:24:32

Sequence gi568815590r:27136849_27342493 : 205645 bp : 42.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8538   8663  126  2  0   17   28   185 0.377   5.63
 1.02 Intr +  22283  22432  150  1  0   86   19   137 0.158   6.04
 1.03 Intr +  35051  35223  173  1  2   55   77   134 0.327   6.82
 1.04 Term +  37332  37413   82  0  1  123   38    75 0.113   2.19
 1.05 PlyA +  39897  39902    6                               1.05

 2.04 PlyA -  40164  40159    6                               1.05
 2.03 Term -  43769  43575  195  2  0   85   43   139 0.389   5.53
 2.02 Intr -  50479  50351  129  1  0   89   57    64 0.416   3.37
 2.01 Init -  63459  63295  165  0  0  109   82    52 0.643   6.38
 2.00 Prom -  66134  66095   40                              -4.45

 3.14 PlyA -  66413  66408    6                               1.05
 3.13 Term -  70547  70430  118  1  1   62   36    95 0.267  -1.27
 3.12 Intr -  72362  72244  119  2  2   77   79    54 0.319   1.74
 3.11 Intr -  80832  80728  105  0  0   57   84    65 0.157   2.49
 3.10 Intr -  83166  83037  130  2  1   23   91    94 0.164   2.98
 3.09 Intr -  94211  94072  140  2  2   82   64    95 0.067   4.84
 3.08 Intr -  95240  95067  174  2  0   11   81   110 0.016   1.81
 3.07 Intr -  97261  97171   91  0  1   33  116    33 0.020  -0.32
 3.06 Intr - 100057 100002   56  1  2  158  103    94 0.966  14.76
 3.05 Intr - 103314 103123  192  0  0   84  100   274 0.931  26.97
 3.04 Intr - 104414 104206  209  0  2   78   94   236 0.920  21.07
 3.03 Intr - 104909 104829   81  0  0   99   53   108 0.651   7.09
 3.02 Intr - 105644 105549   96  0  0   68   86    95 0.550   6.36
 3.01 Init - 117568 117373  196  1  1   69   33   222 0.129  13.94
 3.00 Prom - 125310 125271   40                              -2.95

 4.05 PlyA - 126789 126784    6                               1.05
 4.04 Term - 131145 130918  228  0  0   49   45   146 0.101   2.05
 4.03 Intr - 140765 140611  155  0  2   48   57   129 0.420   4.67
 4.02 Intr - 141971 141836  136  2  1   93   29    64 0.499   0.22
 4.01 Init - 143361 143065  297  0  0   47   67   133 0.577   4.38
 4.00 Prom - 143675 143636   40                              -9.55

 5.08 PlyA - 143732 143727    6                               1.05
 5.07 Term - 151279 150702  578  2  2   79   49   551 0.874  43.94
 5.06 Intr - 151489 151360  130  1  1   28   10    82 0.377  -6.25
 5.05 Intr - 152061 151879  183  0  0   95   67   124 0.553  10.06
 5.04 Intr - 152432 152294  139  1  1  102   37   189 0.508  14.75
 5.03 Intr - 153330 153308   23  0  2  102  131    35 0.996   4.62
 5.02 Intr - 157462 157232  231  1  0  155   91   297 0.998  33.75
 5.01 Init - 161696 161616   81  2  0   94   99   111 0.938  13.84
 5.00 Prom - 170148 170109   40                              -5.75

 6.03 PlyA - 171384 171379    6                               1.05
 6.02 Term - 173833 173723  111  1  0   79   51    95 0.426   2.48
 6.01 Init - 174387 173953  435  0  0   84   94   405 0.663  36.91
 6.00 Prom - 176320 176281   40                              -5.45

 7.07 PlyA - 176583 176578    6                               1.05
 7.06 Term - 179852 179709  144  2  0   52   43   139 0.598   2.73
 7.05 Intr - 185593 185519   75  1  0   64   94    92 0.949   6.19
 7.04 Intr - 187457 187377   81  2  0   98   75    72 0.531   5.82
 7.03 Intr - 188626 188470  157  0  1   85   44    50 0.217  -0.61
 7.02 Intr - 190143 190006  138  2  0   94   75    46 0.336   2.56
 7.01 Init - 194166 194033  134  0  2   51  116   132 0.956  11.96
 7.00 Prom - 196761 196722   40                              -9.65

 8.03 PlyA - 197756 197751    6                               1.05
 8.02 Term - 198011 197887  125  0  2  118   55    69 0.935   4.17
 8.01 Intr - 198440 198287  154  2  1   41   33   181 0.661   6.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  98415  98355   61  2  1  -50   32   243 0.904   1.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_1|176_aa
MAEVERGPFPRLSLGLGTLEIGTRVHCPEDLRPEKCRKNMTSCLNVVDADICFIQLSPSD
HLPMGQLDATYVTCPTDPTPCMDCVDMLQQPTVFDLPALCCGTLDESPSYGDCKKGLVSS
RSHFVTPRPSWRTPEENLVVVSKFRPNIKSPQALHWDNGMPTVDQGLLGPGPSDSV

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_1|531_bp
atggcagaagtagaaagaggacccttcccacgactgtcacttggacttggtaccctggaa
atcggcaccagggtccactgccctgaagacctacgacctgaaaaatgccgtaagaacatg
acctcttgtctcaatgtggttgatgcagatatctgctttatacaactgtctcccagtgac
cacctccctatgggacagctggatgcaacctacgtgacctgccccactgaccctacaccc
tgcatggactgtgtagacatgctgcagcaacctactgtctttgatctgcctgcactttgc
tgtgggacactggacgagtcaccatcctacggggattgtaaaaagggcttggtgtcctct
cgctcacacttcgtaactccacgaccctcatggcgcacaccagaggaaaatcttgttgtg
gtgagtaaatttagaccgaacataaaaagccctcaggccttgcactgggacaatgggatg
cccaccgttgaccaagggctccttggtcctgggccttcagactcagtctga

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_2|162_aa
MAHALRELLKLLSDTGGKKIHLILLLNWSLAVGMCWETLELVDMLGLCDGNEDYNRGPDL
VIYEIHSPASLPFHSSDASVLGDIPPTTYSNISNSNQELLKFPEKVHNGVFWAYPYSREA
LVSPNSHLGQEALWSPPGSFRSPGDSWAIPGDLGMMKRELEG

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_2|489_bp
atggctcatgcattaagggagttactcaagctgttatctgatactggtgggaaaaagata
catttaattctcttactcaactggtctctagctgtgggaatgtgttgggaaactttggaa
ctggtggatatgctgggattgtgtgatggtaatgaagattacaatcgtggcccagacttg
gtgatatacgaaatacactcccctgcttctctcccctttcactcctctgatgcctctgtc
ctcggagatattcccccaaccacttactctaacatatcaaattcgaatcaggagttgctg
aagtttcctgagaaagtgcataatggcgttttctgggcttacccttactccagagaggca
cttgtgtctccaaactcacatcttgggcaagaggctctgtggagtcctcctgggtccttc
aggtccccaggtgacagctgggccattcctggagatcttgggatgatgaagagggagctt
gagggatga

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_3|568_aa
MGFRQLESLDNKLENMNPEKGAERRSRMKDPEWEDEQSVSGPCGSLCLDSQTRGRKVHTE
HAERVAYKEKMKELPLVSLFCSCFLADPLNKSSYKYEGWCGRQCRRKDESQRKDSADWRE
RRAQADTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLE
EIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESN
KENREAHLAAMLERLQEKDKHAEEVRKNKELKEEASRMGLGAAFLLKERSGVLPGSFICE
DFTAALKQDEEIGTMKGKIREAYFKSFVPTPVAFSGGVMLPTGGTLEMCGNNFGGHKEQA
GTVLPAFAIALRVTPSASLVLRPLNLDQAMLQGSLGLQLADGLFWDLASIMEEQYIIQSG
QKTTYNGVGRRWAWNEWTIGKDTERQTEKSGLNLQSSIPFAHTLPTIVFLLMLIFQIPVT
LDTVSLPSNLTFGLDNPLETISPYPSFARRGNSCLEREHDSSKIIQITQWSEVLGSLQAV
AGTCSVQLEVTNIPAHVQSAFSSQQGPI

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_3|1707_bp
atgggctttaggcaactcgagagtttggataacaaactggagaatatgaatccagagaaa
ggagctgagcgcagatctaggatgaaagacccagagtgggaggatgagcagagtgtcagt
ggaccatgtgggagtctgtgcctagacagccagactagagggagaaaagttcacactgag
catgcagaaagagttgcctacaaagagaagatgaaggagctcccgctggtgtccttgttc
tgctcctgcttcctggccgatcccctgaataagtcgtcctacaaatatgaaggctggtgt
gggagacagtgtaggaggaaggatgaaagccagcggaaagacagtgctgactggagagaa
agaagagctcaggcagacacggtggacctgaattggtgcgtcatttccgacatggaagtc
atcgagctgaacaaatgcacctcgggccaatcctttgaagtcatcctgaagccaccctcc
tttgatggggttcccgagttcaacgcctccctgccaaggcggcgagacccatccctggaa
gagatccagaagaaactagaagcggctgaggagcgaaggaagtaccaggaagcggagctc
ctgaaacacctagcagagaaacgggaacatgagagagaggtgatccaaaaggccattgag
gaaaacaacaacttcatcaagatggctaaggaaaaactggcccagaagatggaatccaac
aaggagaacagggaggcccacctcgccgccatgttggaacggctgcaagagaaggacaag
cacgccgaggaggtgcggaaaaacaaggagctgaaggaagaggcctccaggatgggatta
ggagcagcatttctgttgaaagagaggtcgggggtcttacctggaagcttcatttgtgag
gactttactgcagcactgaagcaggatgaggaaatagggacaatgaagggcaaaataaga
gaggcatattttaaatcctttgttcctacaccagtggctttcagtgggggtgtaatgctt
cccacagggggcactttggaaatgtgtggcaataattttggtggacacaaggagcaggca
ggcacagtgcttccagcctttgccatcgcactaagagttacaccatcagcttccttggtc
ctaaggcctttgaatttggaccaagccatgctacagggatccctgggtctccagcttgca
gatggattattttgggacttagcctccataatggaggaacagtacattatccagagtggc
cagaagaccacgtacaatggggttggtagaagatgggcatggaatgaatggacaattggg
aaggacactgaacgtcagactgagaaatctggacttaatctacagtcatccattccattt
gctcacacattgccaaccatcgtctttctcctgatgctgatctttcagatcccagtgact
cttgacactgtatccttgccttccaacctgacttttgggctggacaatcccttagagacc
attagtccatatccttcatttgccagacgaggaaattcatgcttagagagagaacatgac
tcttccaagatcatacagatcacacagtggtctgaggtcctcggttccttgcaggctgta
gctgggacctgctctgtgcagctggaggtcactaacattcctgctcatgtgcaatctgca
ttttcaagccagcaaggacccatctaa

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_4|271_aa
MTGAGHCGVVRSVPCLRTLGGSTGKAIRELKAIRELWSPGSAREIRSRVARAHFRGGLKI
QVKDLRGVNRGRIATKGRRRNRCKYKYVEQWCQKTPNSDLLFEVTRNPVFFCPSSCSTIL
ATASSRKQLGREKGELVATWCILGGTEGGRGQEAEYEKGVSEIEQNCKETEKNTVDLKLI
EERVKNRAVTKIEKNGVWDDLQINKVKVDFLNCPAHPKAKSVKQRTRALGLPSKKLQPHR
QGPAQLLSFTSCLETAFNKCSLPKLNRQAAS

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_4|816_bp
atgactggtgctggtcactgcggcgtggtgaggtcagtgccgtgtttgaggacattgggt
ggaagcacagggaaggccattagagagctcaaggccattagagagctctggagtccagga
tctgcacgggagatacggagtcgtgtggcacgggcacattttagaggggggctgaagatt
caggttaaagacttacgaggagtgaatagaggcagaattgcaaccaaaggaaggcggcgt
aacagatgcaaatacaaatacgttgaacagtggtgtcaaaagaccccgaattcagatctg
ctttttgaagtgaccaggaatcctgttttcttctgtccttcatcctgcagcaccatccta
gcgactgcaagctccaggaagcaactgggcagagagaagggggaactggtggcaacatgg
tgcatcctgggaggaacagagggaggaagaggacaggaggctgagtatgagaagggagtg
agtgagatagagcaaaactgcaaggaaactgagaagaacacagtggacttgaaactcata
gaagagagagtcaagaacagagctgtaaccaagattgagaaaaatggagtttgggatgat
ctacaaattaacaaggtgaaggtggactttctcaactgccctgcgcaccctaaggcgaaa
tccgttaagcagagaaccagagccctcgggcttccttctaagaaactgcagccccacagg
cagggcccagctcagctgctcagcttcacaagctgtctagaaacagctttcaacaaatgc
agtctccctaaattaaatcgacaggctgccagttaa

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_5|454_aa
MEHALREKAKAFWAMRRSYEAIAKHNQVEAAWLEGRIRQEFDKLREFLRVEEQAILDAMA
EETRQKQLLADEKMKQLTEETEVLAHEIERLQMEMKEDDVSFLMKHKSRKRRLFCTMEPE
PVQPGMLIDVCKYLGSLQYRVWKKMLASVESGERGCRQRGKLAFLPIQNCVLYDKRPPAS
GLASPKATAAHMSHSVLVLRGGISLTQGMGRAVLTSLGRVTLGGTRGWDCRISSGGYSPT
PATTPALGHSLHGLGARCDTVVVPFSFDPNTAAGWLSVSDDLTSVTNHGYRVQVENPERF
SSAPCLLGSRVFSQGSHAWEVALGGLQSWRVGVVRVRQDSGAEGHSHSCYHDTRSGFWYV
CRTQGVEGDHCVTSDPATSPLVLAIPRRLRVELECEEGELSFYDAERHCHLYTFHARFGE
VRPYFYLGGARGAGPPEPLRICPLHISVKEELDG

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_5|1365_bp
atggagcatgcactgcgggagaaggccaaggccttctgggccatgcggcgctcctatgag
gccatcgccaagcacaatcaggtggaggctgcatggctggaaggccggatccggcaggag
tttgataagcttcgcgagttcttgagagtggaggagcaggccattctggatgccatggcc
gaggagacaaggcagaagcaacttctggccgacgagaagatgaagcagctcacagaggag
acggaggtgctggcacatgagatcgagcggctgcagatggagatgaaggaggacgacgtt
tcttttctcatgaaacacaagagccgaaaacgccgactcttctgcaccatggagccagag
ccagtccagcccggcatgcttatcgatgtctgcaagtacctgggctccctgcagtaccgc
gtctggaagaagatgcttgcatctgtggaatctggtgagcgggggtgccggcagagaggg
aaactggctttcttgcctattcagaactgtgttttgtatgataaaagacctcctgcatct
gggcttgcctctcctaaggcgactgcagcccacatgagccacagtgtcctggttttacgg
ggaggaatatcactgactcagggaatgggccgtgctgtcctaacatcccttggtcgtgtc
acactcggaggtaccaggggttgggactgccgcatatcttctgggggatacagcccaacc
cctgccaccactccagccctgggccactccttgcatggacttggggccaggtgtgacaca
gtggttgtacccttcagctttgaccccaacaccgcagctggctggctctccgtgtctgac
gacctcaccagcgtcaccaaccatggctaccgcgtgcaggtggagaacccggaacgcttc
tcctcggcgccctgcctgctgggctcccgtgtcttctcacagggctcgcacgcctgggag
gtggcccttggggggctgcagagctggagggtgggcgtggtacgtgtgcgccaggactcg
ggcgctgagggccactcacacagctgctaccacgacacacgctcgggcttctggtatgtc
tgccgcacgcagggcgtggagggggaccactgcgtgacctcggacccagccacgtcgccc
ctggtcctggccatcccacgccgcctgcgtgtggagctggagtgtgaggagggcgagctg
tctttctatgacgcggagcgccactgccacctgtacaccttccacgcccgctttggggag
gttcgcccctacttctacctggggggtgcacggggcgccgggcctccagagcctttgcgc
atctgccccttgcacatcagtgtcaaggaagaactggatggctga

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_6|181_aa
MERSPDVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVC
KDRASPADLRTNHTLNNLVEKLLREEAEGARWTSYRFSRVCRLHRGQLSLFCLEDKELLC
CSCQADPRHQGHRVQPVKDTAHDFRHAGPHLSDPGSQGWLLLQGRPRGPCWEKRMRTESD
R

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_6|546_bp
atggagcggagtcccgacgtgtcccccgggccttcccgctccttcaaggaggagttgctc
tgcgccgtctgctacgaccccttccgcgacgcagtcactctgcgctgcggccacaacttc
tgccgcgggtgcgtgagccgctgctgggaggtgcaggtgtcgcccacctgcccagtgtgc
aaagaccgcgcgtcacccgccgacctgcgcaccaaccacaccctcaacaacctggtggag
aagctgctgcgcgaggaggccgagggcgcgcgctggaccagctaccgcttctcgcgtgtc
tgccgcctgcaccgcggacagctcagcctcttctgcctcgaggacaaggagctgctgtgc
tgctcctgccaggccgacccccgacaccaggggcaccgcgtgcagccggtgaaggacact
gcccacgactttcggcatgcaggaccccacctctccgacccaggttctcagggctggctg
cttcttcaaggtcggcccaggggcccgtgctgggagaagagaatgcgaacggaaagtgac
agatga

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_7|242_aa
MLANTAKLGNGKACLPQVLAIADLGFSHTNWLPHKSSNHLSAGKSPLVQGWIVPCTFPWQ
PSLNHPVSHTALVSRGHATLTLSPHLAPGRRVGCVVCVCRLQPLTINSEIDAATNSLSAG
QTWGAISAIPPAANGILGCYVPLICHVPSTQHFGGNLGDYTAVSRSEGGQLVFTTVYEVA
SPIPGLQKGKGSLDKASVKVHRTTVISSKIYLVTLMNKVDYVCSARMPVSEDAAASPVAD
FI

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_7|729_bp
atgttagcgaacacagccaagctaggaaacgggaaggcttgcctcccgcaggtattggcc
attgctgatcttggttttagtcacactaactggctgcctcataaaagcagcaaccacctt
agtgctgggaaaagccctctagtgcagggttggatagtaccctgcaccttcccctggcag
ccctccctcaaccacccggtatcccacactgccctggtgagcagaggccatgccacactc
accttgtccccacaccttgcacctggccgcagggtggggtgtgttgtctgtgtgtgccgg
ctccagcctcttaccataaactctgaaatagacgctgccaccaattccctgagcgccggg
cagacctggggggcgatctctgccattcccccggccgcaaatgggatcctcggatgttat
gtgccccttatttgtcacgttcccagcactcagcattttggaggtaatcttggtgactac
acagcggtcagcaggtcagaaggtggtcagcttgtcttcacaaccgtctatgaagttgct
agtcctattcctggtttgcagaaaggaaaaggaagcttggataaggcctcagtaaaggta
catcggactacagtgatttcctcaaagatttacttggtaactctgatgaacaaggtcgat
tatgtctgcagtgccaggatgcctgtttccgaagatgctgctgccagccctgtggctgac
tttatttag

>gi568815590r:27136849_27342493|GENSCAN_predicted_peptide_8|92_aa
GQVKTGRGLRGCTGDNADKRGDCRTSVCKSRASQGQKAQSPAAKAMSVYTGGNLHLQDRQ
EGHPNHRARIQETRDVAPILVATGCCDTHCGE

>gi568815590r:27136849_27342493|GENSCAN_predicted_CDS_8|279_bp
ggtcaagtaaagacagggagagggctcagaggctgcactggtgacaatgcagataaacga
ggtgattgtcgaacaagtgtttgcaaatctcgagcttcccagggccagaaagctcagagt
ccagcagccaaggctatgtctgtgtacactggaggaaatctccaccttcaggacaggcaa
gaagggcatcctaaccacagggcaagaattcaagagactcgggatgtggcccctattcta
gttgcaactggctgttgcgacacccactgcggggaatga