GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:37:47

Sequence gi568815596r:119340120_119624226 : 284107 bp : 44.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6688   6727   40                              -2.96
 1.01 Init +   6914   6956   43  1  1   35  110    29 0.278   0.38
 1.02 Intr +  18723  18914  192  1  0  -26   82   134 0.031   0.86
 1.03 Intr +  26819  26941  123  0  0   36   92   105 0.150   6.26
 1.04 Intr +  27688  27812  125  2  2   52   22    31 0.080  -6.80
 1.05 Intr +  28069  28186  118  0  1   98   85   155 0.950  16.24
 1.06 Intr +  30621  30683   63  1  0   71   86    93 0.678   6.09
 1.07 Term +  32126  32199   74  0  2   96   54   133 0.888   8.77
 1.08 PlyA +  33708  33713    6                               1.05

 2.02 PlyA -  33821  33816    6                               1.05
 2.01 Sngl -  74723  74286  438  2  0   29   35   303 0.996  15.36
 2.00 Prom -  78430  78391   40                              -2.16

 3.00 Prom +  82097  82136   40                              -7.46
 3.01 Init +  86945  87053  109  1  1   96   55    55 0.721   3.46
 3.02 Intr +  91366  91590  225  2  0   82    3   169 0.596   5.76
 3.03 Intr +  91686  91805  120  1  0   76   68    85 0.767   5.77
 3.04 Intr +  96405  96535  131  1  2   43   77    32 0.285  -1.99
 3.05 Term +  96770  97321  552  1  0   91   47   655 0.977  56.01
 3.06 PlyA +  97585  97590    6                              -0.45

 4.21 PlyA -  98598  98593    6                               1.05
 4.20 Term - 100138  99998  141  1  0  101   54   132 0.999   9.03
 4.19 Intr - 101480 101439   42  2  0  118  105    96 0.974  12.74
 4.18 Intr - 106766 106640  127  1  1   55  111   162 0.671  15.88
 4.17 Intr - 108661 108570   92  1  2  114   97   -11 0.993   1.19
 4.16 Intr - 111960 111891   70  2  1  120  105    89 0.990  12.98
 4.15 Intr - 113228 113168   61  0  1  126   94     8 0.842   2.99
 4.14 Intr - 121881 121728  154  0  1  102   63   192 0.888  17.75
 4.13 Intr - 124136 124004  133  1  1  124   52   279 0.994  28.55
 4.12 Intr - 125767 125670   98  1  2   82   97   197 0.995  18.81
 4.11 Intr - 133437 133334  104  1  2   92  102   127 0.836  14.39
 4.10 Intr - 138799 138692  108  2  0  110   46    32 0.579   1.46
 4.09 Intr - 142062 141993   70  0  1  103   94    34 0.943   4.25
 4.08 Intr - 143077 142898  180  1  0   38   61   102 0.035   2.56
 4.07 Intr - 148229 148150   80  0  2   58   94    66 0.042   3.47
 4.06 Intr - 154429 154309  121  1  1   56   80    86 0.120   4.67
 4.05 Intr - 155464 155355  110  2  2   56   94    43 0.050   1.70
 4.04 Intr - 156052 155969   84  2  0   63   94    72 0.013   5.09
 4.03 Intr - 175664 175454  211  2  1   72   89    29 0.421  -0.11
 4.02 Intr - 180547 180419  129  1  0   85   53    80 0.779   5.09
 4.01 Init - 184107 184036   72  0  0   97  109   156 0.645  17.70
 4.00 Prom - 194006 193967   40                              -1.86

 5.00 Prom + 194906 194945   40                              -3.16
 5.01 Init + 200568 200612   45  2  0   73   29    64 0.185  -0.32
 5.02 Intr + 204193 204391  199  0  1   67   84   190 0.371  15.42
 5.03 Intr + 208966 209066  101  2  2   78   82    29 0.356   1.13
 5.04 Intr + 219570 219656   87  2  0   98  121    40 0.979   8.47
 5.05 Intr + 219770 219907  138  1  0   73  100   172 0.797  17.56
 5.06 Term + 220492 220515   24  0  0  104   54     4 0.602  -3.18
 5.07 PlyA + 221178 221183    6                               1.05

 6.00 Prom + 225117 225156   40                              -2.86
 6.01 Init + 232653 232822  170  2  2   79   77   105 0.194   7.51
 6.02 Intr + 247000 247103  104  1  2  104  110    17 0.223   5.32
 6.03 Intr + 261099 261258  160  1  1   96   22    80 0.180   1.25
 6.04 Intr + 264553 264673  121  1  1   77  102    41 0.657   4.90
 6.05 Intr + 264757 264868  112  0  1   87   86   114 0.994  11.05
 6.06 Intr + 265062 265170  109  1  1   79   44    78 0.868   1.84
 6.07 Intr + 268383 268470   88  0  1  106   77    17 0.833   2.37
 6.08 Intr + 271534 271623   90  0  0   22   90    89 0.710   2.69
 6.09 Term + 274899 274910   12  2  0  145   46     1 0.410  -0.20
 6.10 PlyA + 275353 275358    6                               1.05

 7.00 Prom + 275692 275731   40                              -4.86
 7.01 Init + 279506 279651  146  1  2   78   98    92 0.743   8.79
 7.02 Term + 279751 280501  751  1  1  -51   42   378 0.957  12.22
 7.03 PlyA + 280760 280765    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_1|245_aa
MSVGDDHKAVLKPSGADVEAAPSYPEDLAKIDEAGYTKQQIFNTDKTALYWKMKPSRICI
AREKSTPGFKASKDRLTVGLGRVDRASKGACQCNLGDRFLVLASSAVSLEFLQVGQDVSV
PGPVVARQLAALLLPQRGPPLGAKAWPALFTAVFPDLMPAFAEFEKAAEEVRHLKTKPSD
EEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELK
KKYGI

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_1|738_bp
atgagtgtaggtgatgatcataaagcggtgttaaaaccatcaggtgctgatgtagaagct
gcaccaagttatcctgaagatctagctaagattgatgaagctggctacactaaacaacag
attttcaacacagacaaaacagccttatattggaagatgaagccatctaggatctgcata
gctagggagaagtcaacgcctggttttaaagcttcaaaggacaggctgactgtggggttg
gggcgagtggaccgcgcctctaaaggcgcttgccagtgcaatctgggcgatcgcttcctg
gtcctcgcctcctccgctgtctccctggagttcttgcaagtcggccaggatgtctcagtg
cctggcccggtggtggccaggcagttggccgcgctgcttctcccgcagaggggaccccca
ctgggggcgaaggcttggcctgccctcttcactgctgtatttccagacctgatgcctgcg
tttgctgagtttgagaaagctgcagaggaggttaggcaccttaagaccaagccatcggat
gaggagatgctgttcatctatggccactacaaacaagcaactgtgggcgacataaataca
gaacggcccgggatgttggacttcacgggcaaggccaagtgggatgcctggaatgagctg
aaagggacttccaaggaagatgccatgaaagcttacatcaacaaagtagaagagctaaag
aaaaaatacgggatatga

>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_2|145_aa
MAIIYDLKKQKDKLLRLYTESDEQKKLMKHRKTLHKAKNEDPNCVLKEWIYQHCHEHTPL
NGMLIMIQAKMCHNELKIKGNCKYSTDSLQKCKKRHNITFLKISGDETSADHKAVEEFTD
EFAKVIADENLMPGRVYNADEASLF

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_2|438_bp
atggccattatatatgacctgaagaaacagaaggataaactgttgaggctctacactgag
agtgatgaacagaagaagttaatgaaacatagaaaaacactgcataaagctaaaaatgaa
gatcccaattgtgtattgaaagagtggatctatcagcattgccatgaacacacgcccctt
aatggtatgctgatcatgatacaagcaaagatgtgtcacaatgaactaaaaattaaaggg
aactgtaaatattcaacagattctttgcagaaatgtaagaaaagacataacattacattt
ttaaagatttctggtgatgaaacatctgctgatcacaaagcagtggaggaattcactgat
gagtttgccaaggtcattgctgatgaaaatctgatgccaggacgagtctataatgctgat
gaagcatcattgttttag

>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_3|378_aa
MAWGLGEEEDLVGKGGAAGGEEREEAMGHRQGKTWREAGLSKLEQESNPQALVAVPALEE
SAPQAKLSSEVRERRSDFPILSPGTRGIPPPKCRVLPAAPQGLLRPPSLTQPAAPPLRRS
PGLAPAATAEQLERSRLQRGRRAQHDCRRRAETEAGCMLKVMGCRHDRFSELRTDSDLPV
GLDFSPTLKITKERKAQRPLGQRQPRRSFFESFIRTLIITCVALAVVLSSVSICDGHWLL
AEDRLFGLWHFCTTTNQTICFRDLGQAHVPGLAVGMGLVRSVGALAVVAAIFGLEFLMVS
QLCEDKHSQCKWVMGSILLLVSFVLSSGGLLGFVILLRNQVTLIGFTLMFWCEFTASFLL
FLNAISGLHINSITHPWE

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_3|1137_bp
atggcgtgggggctgggagaagaggaagacctggttggtaaaggcggggcagcaggagga
gaggagagggaagaggccatgggccacagacaaggcaagacctggagagaggctggactc
agcaagctggaacaggaatcgaaccctcaggccctcgtcgccgtcccagccctcgaggaa
tctgcgccccaggcgaagctgtcctcggaggttcgggagcgtcggagtgacttcccgatc
ctttcccctgggacccgagggatccctccccccaagtgccgggtcctccccgcggctccc
caggggctcctccggccgccctcgctgactcagccagccgccccgcccctgcggagaagt
cccgggctggcgccggcggccacagcggagcagctggagcgatcgaggctgcagcgcggc
cgccgggcgcagcatgactgccgtcggcgtgcagaaaccgaggcaggctgcatgctcaag
gtcatgggatgcaggcacgacaggttttctgaactcagaactgactcagatttgccagtc
ggtttggacttctcacccactctgaagatcacaaaagaaagaaaggcccagaggcctttg
ggccaaaggcagccccgccggtccttctttgaatccttcatccggaccctcatcatcacg
tgtgtggccctggctgtggtcctgtcctcggtctccatttgtgatgggcactggctcctg
gctgaggaccgcctcttcgggctctggcacttctgcaccaccaccaaccagacgatctgc
ttcagagacctgggccaggcccatgtgcccgggctggccgtgggcatgggcctggtacgc
agcgtgggcgccttggccgtggtggccgccatttttggcctggagttcctcatggtgtcc
cagttgtgcgaggacaaacactcacagtgcaagtgggtcatgggttccatcctcctcctg
gtgtctttcgtcctctcctccggcgggctcctgggttttgtgatcctcctcaggaaccaa
gtcacactcatcggcttcaccctaatgttttggtgcgaattcactgcctccttcctcctc
ttcctgaacgccatcagcggccttcacatcaacagcatcacccatccctgggaatga

>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_4|728_aa
MRPHLSPPLQQLLLPVLLACAAHSLMAKKYKNSKYRLWHMEAFSTWWSLPCPVMHLDPEA
DKPCGCTQHGSGQRGSESDRLRIREDDGGTQSEARVLGTMGGPLVQVLKSKAVEPGILMF
KDRRRVSQFQERERKRESGFFHSSSSTSSTEKPEGARDYGLRQEPELLITWANLECGFVS
RVFSPCSIMLEFPETMGFSKNQTGALPRLCDVLQVLWEEQDQCLQELSREQTGDLGTEQP
VPEKGSPGFARAVVSGQALAAEPRRASVQASLGALPDVTQVRKPLRRAGTVHICLANQPG
IVQPHGLEPAAGTLADLASPASTESVFPQFPEPGLNKEGTWQLGPVSPGDWSGCEGMWDN
ISCWPSSVPGRMVEVECPRFLRMLTSRNGSLFRNCTQDGWSETFPRPNLACGVNVNDSSN
EKRHSYLLKLKVMYTVGYSSSLVMLLVALGILCAFRRLHCTRNYIHMHLFVSFILRALSN
FIKDAVLFSSDDVTYCDAHRAGCKLVMVLFQYCIMANYSWLLVEGLYLHTLLAISFFSER
KYLQGFVAFGWGSPAIFVALWAIARHFLEDVGCWDINANASIWWIIRGPVILSILINFIL
FINILRILMRKLRTQETRGNEVSHYKRLARSTLLLIPLFGIHYIVFAFSPEDAMEIQLFF
ELALGSFQGLVVAVLYCFLNGEVQLEVQKKWQQWHLREFPLHPVASFSNSTKASHLEQSQ
GTCRTSII

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_4|2187_bp
atgcgtccccacctgtcgccgccgctgcagcagctactactgccggtgctgctcgcctgc
gccgcgcactcgttgatggctaagaaatataaaaattccaagtacaggctctggcacatg
gaagccttcagtacatggtggtcgctgccctgtccggtcatgcatctggatccagaagct
gacaagccctgtggctgcacacaacatggctcaggccaacgtggttctgagtctgaccgc
ctcagaatcagggaagatgatggtggaactcagtcagaagctagagtcctgggaaccatg
gggggaccacttgtgcaagttctaaaatccaaggctgtagaacctgggattctgatgttc
aaggacaggagaagggtgtcccagttccaggaaagagagagaaagagagagagtggattt
ttccactcaagctcttccacttcctccactgagaagccagagggtgccagagactatggg
cttcggcaagaaccagaacttttgattacttgggccaatttggaatgtggctttgtctcc
agggtcttctctccctgctccattatgttggaatttccagagactatgggcttcagcaag
aaccagactggagcccttccccgactatgtgacgtgctacaagtgctgtgggaagagcaa
gaccagtgcctgcaggaactctccagagagcagacaggagacctgggcacggagcagcca
gtgccagaaaagggctcccctggctttgcaagagctgtggtgtctggccaggccctggcg
gctgaaccaaggagggccagcgtgcaggcatccctgggggccctgcctgacgtgacccaa
gttaggaagcctctcagacgtgctggcaccgtccacatctgtctggccaaccagccaggc
attgtccagcctcatggcctggagcctgcggctggtaccctggctgacctggccagtcca
gccagcactgaatctgtttttccacaattcccagagcctggcttgaacaaggagggcact
tggcagctggggccggtgtcacctggagactggtcaggttgtgaggggatgtgggacaac
ataagctgctggccctcttctgtgccgggccggatggtggaggtggaatgcccgagattc
ctccggatgctcaccagcagaaatggttccttgttccgaaactgcacacaggatggctgg
tcagaaaccttccccaggcctaatctggcctgtggcgttaatgtgaacgactcttccaac
gagaagcggcactcctacctgctgaagctgaaagtcatgtacaccgtgggctacagctcc
tccctggtcatgctcctggtcgcccttggcatcctctgtgctttccggaggctccactgc
actcgcaactacatccacatgcacctgttcgtgtccttcatccttcgtgccctgtccaac
ttcatcaaggacgccgtgctcttctcctcagatgatgtcacctactgcgatgcccacagg
gcgggctgcaagctggtcatggtgctgttccagtactgcatcatggccaactactcctgg
ctgctggtggaaggcctctaccttcacacactcctcgccatctccttcttctctgaaaga
aagtacctccagggatttgtggcattcggatggggttctccagccatttttgttgctttg
tgggctattgccagacactttctggaagatgttgggtgctgggacatcaatgccaacgca
tccatctggtggatcattcgtggtcctgtgatcctctccatcctgattaatttcatcctt
ttcataaacattctaagaatcctgatgagaaaacttagaacccaagaaacaagaggaaat
gaagtcagccattataagcgcctggccaggtccactctcctgctgatccccctctttggc
atccactacatcgtcttcgccttctccccagaggacgctatggagatccagctgtttttt
gaactagcccttggctcattccagggactggtggtggccgtcctctactgcttcctcaat
ggggaggtgcagctggaggttcagaagaagtggcagcaatggcacctccgtgagttccca
ctgcaccccgtggcctccttcagcaacagcaccaaggccagccacttggagcagagccag
ggcacctgcaggaccagcatcatctga

>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_5|197_aa
MKQGEEEANQGASSQARQTAPSSQESPAASGRGPQQPGSPALGRLVAPGRRPWERVRVVM
ATLRAGAGAGAGRIRPGNHLQEVYAKLVNNKVIQARPGIIHFGGYQVEKQHQQILHLVNV
SNEDTRVHILPPQTKYFEINYVRKSGACPNKMPPVFQEHHLVPGLSLTVTVTFSPDEWRY
YYDCIRVHCKSRPQSSA

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_5|594_bp
atgaagcagggcgaggaggaggcaaatcaaggggccagcagccaggcccggcaaactgct
ccgagctcccaggaatcacccgccgcctccggtcgtggcccgcagcagcccggctccccc
gccctggggcgtttggtcgcgcccggccgccggccctgggagcgcgtccgcgtcgtcatg
gcgacgctccgagcgggcgccggcgctggcgccggccgaatccggcccgggaaccacctc
caggaggtttatgcaaaacttgtgaataataaggtcatacaggcaagacctggcataata
cattttggaggctatcaagtagaaaaacaacaccaacagattctgcatctggtcaatgtt
tccaatgaagacacacgtgttcatattttacccccgcaaaccaaatactttgagatcaat
tatgtaagaaagtccggggcttgtcccaacaagatgccacctgtcttccaggaacaccac
ctggtccctggcttgtccctcacggtcaccgttacattttctccagatgagtggcgatac
tattatgactgcatccgtgttcactgtaagtccagaccccagtcttcagcttga

>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_6|321_aa
MGKAAMGSCSKWTMYSSQGYRGSVACRATLTTFTEEAPGDSIPKPGYFSFLNFYVISKTY
VIPLQCSCPVDFEFYITLIQSHQAFAIEPTSGIIPANGKMTVTIKFTPFQYGTAQIKMQL
WISQFNSQPYECVFTGTCYPNMALPLEEFERLNTLSKKVNVPPEKAMMHINFHRPPAKPK
PQKVKEIEYQNLRFPVDLSNPFAVATVLNQEPGKLKIKELREVLDQGTEISKTRQMKEAL
FEQKVRQDIHEEMENHLKWQVHLGKDPMSFKLKKELTEEWQKACAKYKLDRGDPILDEEF
QRLKTEVSHKRVVRNQEELMA

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_6|966_bp
atgggcaaggccgccatgggctcctgcagcaagtggaccatgtactcatctcaaggctat
agaggctctgtagcctgcagggccacattaacaacattcacagaagaggctcctggtgac
tccattccaaagccaggatactttagcttcttgaacttttatgtcataagcaaaacttat
gttattcctttgcagtgcagctgccctgtagattttgagttttatatcaccttgattcag
tctcatcaagcctttgctattgagccaacatcaggaataattccggctaatgggaagatg
actgtgactattaagtttacaccctttcagtatgggactgcacaaataaaaatgcagtta
tggatttcgcagttcaactctcaaccatacgaatgtgtcttcaccggaacatgctatccc
aacatggccttaccattagaagagtttgaaaggttgaataccctttctaagaaagtaaac
gttcctccagaaaaagcaatgatgcatataaattttcaccgaccgccagcgaagccgaag
cctcagaaggtgaaggaaattgagtaccagaacctcagatttccagtagatttatcgaat
ccatttgctgtggcaactgttttaaaccaagaaccaggaaaattgaagattaaagaatta
agagaagttttggaccagggcactgaaatttcaaaaacgagacagatgaaggaggcactc
tttgaacagaaagtcagacaggacattcacgaagagatggaaaatcatcttaagtggcag
gtgcaccttggtaaagatcctatgtcttttaaacttaaaaaagagcttactgaagagtgg
caaaaagcatgtgccaaatataagctagacagaggagatcctattttggatgaggaattt
cagcgacttaaaacagaagttagccataaacgggttgttcgcaatcaagaagagctcatg
gcataa

>gi568815596r:119340120_119624226|GENSCAN_predicted_peptide_7|298_aa
MRKNQCKKAENSKNQNTSSPPKDHNSSTAREQNWMENEFDKLTELGLRRITSLEKNINNL
IELKNTARELHEEYTSIKSQIDQVEERISEIEDQLDEIKREDKIREKRMKRNEQSPQEMW
DYMKRPNLRLTGVPKSDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSR
RATPRHIIIRFTKVEMKEKMLRVAREKGHVTHKGKPIRPTADLSAETLQDRREWGPIFNI
LTEKHFQPTISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALQELLKEAINLERKIR

>gi568815596r:119340120_119624226|GENSCAN_predicted_CDS_7|897_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaatacctcctctcct
ccaaaggatcacaattcctcgacagcaagggaacaaaactggatggagaatgagtttgac
aaattgacagaattaggcctcagaagaataaccagtttagagaagaacataaataacctg
atagagctgaaaaacacagcacgagaacttcatgaagaatacacaagtatcaagagccaa
atcgatcaagtggaagaaaggatatcagagattgaagatcaacttgatgaaataaagcgt
gaagacaagattagagaaaaaagaatgaaaaggaatgaacaaagcccccaagaaatgtgg
gactatatgaaaagaccaaacctacgtttgactggtgtacctaaaagtgatggggagaat
ggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccaacctagca
agacaggccaatattcaaattcaggaaatacagagaacaccacaaagatactcctcgaga
agagcaaccccaagacacataatcatcagattcaccaaggttgaaatgaaggaaaaaatg
ttaagggtagccagagagaaaggtcatgttacccacaaagggaagcccatcagaccaaca
gcggacctctctgcagaaaccctacaagaccgaagagagtgggggccaatattcaacatt
ctcacagaaaagcattttcaacccacaatttcatatccagccaaactaagcttcataagt
gaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccagg
ccagccttacaagagctcctgaaggaagcaataaatttggaaaggaaaatccggtaa