Result of FASTA (ccds) for pF1KB6561
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6561, 374 aa
  1>>>pF1KB6561 374 - 374 aa - 374 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5737+/-0.000844; mu= 10.5703+/- 0.051
 mean_var=98.1604+/-20.234, 0's: 0 Z-trim(108.3): 70  B-trim: 2 in 1/53
 Lambda= 0.129451
 statistics sampled from 10083 (10153) to 10083 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.312), width:  16
 Scan time:  2.520

The best scores are:                                      opt bits E(32554)
CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1           ( 374) 2507 478.6 3.9e-135
CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1         ( 224) 1481 286.8 1.2e-77
CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1         ( 280) 1263 246.2 2.7e-65
CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1        ( 426)  654 132.5 6.6e-31
CCDS72846.1 FCGR1B gene_id:2210|Hs108|chr1         ( 188)  640 129.7   2e-30
CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1         ( 233)  586 119.7 2.6e-27
CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1         ( 269)  586 119.7   3e-27
CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1         ( 254)  578 118.2   8e-27
CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1          ( 290)  578 118.3 8.9e-27
CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1         ( 316)  575 117.7 1.4e-26
CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1         ( 216)  572 117.1 1.5e-26
CCDS1165.1 FCRL5 gene_id:83416|Hs108|chr1          ( 977)  575 118.0 3.7e-26
CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1         ( 303)  565 115.8   5e-26
CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1         ( 310)  565 115.8 5.1e-26
CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1         ( 317)  564 115.7 5.9e-26
CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1         ( 291)  559 114.7   1e-25
CCDS1166.1 FCRL4 gene_id:83417|Hs108|chr1          ( 515)  553 113.7 3.7e-25
CCDS30926.1 FCRLA gene_id:84824|Hs108|chr1         ( 376)  515 106.5 3.9e-23
CCDS53415.1 FCRLA gene_id:84824|Hs108|chr1         ( 382)  515 106.5 3.9e-23
CCDS1167.1 FCRL3 gene_id:115352|Hs108|chr1         ( 734)  508 105.4 1.7e-22
CCDS81385.1 FCRL3 gene_id:115352|Hs108|chr1        ( 742)  508 105.4 1.7e-22
CCDS1184.1 FCER1A gene_id:2205|Hs108|chr1          ( 257)  501 103.8 1.7e-22
CCDS72962.1 FCRLB gene_id:127943|Hs108|chr1        ( 275)  481 100.1 2.4e-21
CCDS72963.1 FCRLB gene_id:127943|Hs108|chr1        ( 318)  479 99.8 3.6e-21
CCDS72964.1 FCRLB gene_id:127943|Hs108|chr1        ( 268)  443 93.0 3.2e-19
CCDS60312.1 FCRL6 gene_id:343413|Hs108|chr1        ( 413)  445 93.5 3.6e-19
CCDS30912.1 FCRL6 gene_id:343413|Hs108|chr1        ( 434)  445 93.5 3.8e-19
CCDS72965.1 FCRLB gene_id:127943|Hs108|chr1        ( 311)  441 92.7 4.8e-19
CCDS53419.1 FCRLA gene_id:84824|Hs108|chr1         ( 236)  331 72.1 5.8e-13
CCDS1168.1 FCRL2 gene_id:79368|Hs108|chr1          ( 508)  335 73.0 6.6e-13
CCDS53416.1 FCRLA gene_id:84824|Hs108|chr1         ( 242)  323 70.6 1.7e-12
CCDS53417.1 FCRLA gene_id:84824|Hs108|chr1         ( 287)  323 70.6 1.9e-12
CCDS72960.1 FCGR3B gene_id:2215|Hs108|chr1         ( 130)  312 68.4 4.1e-12


>>CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1                (374 aa)
 initn: 2507 init1: 2507 opt: 2507  Z-score: 2539.5  bits: 478.6 E(32554): 3.9e-135
Smith-Waterman score: 2507; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374)

               10        20        30        40        50        60
pF1KB6 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 IMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 IMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
              310       320       330       340       350       360

              370    
pF1KB6 LQEGVHRKEPQGAT
       ::::::::::::::
CCDS93 LQEGVHRKEPQGAT
              370    

>>CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1              (224 aa)
 initn: 1480 init1: 1244 opt: 1481  Z-score: 1507.3  bits: 286.8 E(32554): 1.2e-77
Smith-Waterman score: 1481; 98.2% identity (98.7% similar) in 224 aa overlap (1-223:1-224)

               10        20        30        40        50        60
pF1KB6 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
       ::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS72 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETITLHCEVLHLPGSSSTQWFLNG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS72 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFMEGEPL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
              130       140       150       160       170       180

               190       200       210       220       230         
pF1KB6 IS-VTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR
       ::  ::::::::::::::::::::::::::::::::::::::::                
CCDS72 ISQYTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGL                
              190       200       210       220                    

     240       250       260       270       280       290         
pF1KB6 NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAV

>>CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1              (280 aa)
 initn: 1848 init1: 1244 opt: 1263  Z-score: 1285.8  bits: 246.2 E(32554): 2.7e-65
Smith-Waterman score: 1664; 73.0% identity (73.8% similar) in 374 aa overlap (1-374:1-280)

               10        20        30        40        50        60
pF1KB6 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
       ::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS72 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETITLHCEVLHLPGSSSTQWFLNG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS72 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFMEGEPL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN
       ::                                                          
CCDS72 IS----------------------------------------------------------
                                                                   

              250       260       270       280       290       300
pF1KB6 TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVG
                                           .  : :::::::::::::::::::
CCDS72 ------------------------------------QYTVKGLQLPTPVWFHVLFYLAVG
                                                190       200      

              310       320       330       340       350       360
pF1KB6 IMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
       :::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS72 IMFLVNTVLWVTIRKELKRKKKWNLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
        210       220       230       240       250       260      

              370    
pF1KB6 LQEGVHRKEPQGAT
       ::::::::::::::
CCDS72 LQEGVHRKEPQGAT
        270       280

>>CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1             (426 aa)
 initn: 490 init1: 327 opt: 654  Z-score: 668.3  bits: 132.5 E(32554): 6.6e-31
Smith-Waterman score: 654; 40.5% identity (62.5% similar) in 291 aa overlap (1-278:1-285)

               10        20         30        40             50    
pF1KB6 MWFLTTLLLWVPVDGQVDTT-KAVITLQPPWVSVFQEETVTLHCEVLHLP-----GSSST
       :: ::.::: :: .::. :  : ...:.:::...:. : :::.:.  : :        ::
CCDS30 MWPLTALLLLVPSSGQAATLEKPILSLHPPWTTIFKGERVTLKCDGYH-PLLLELQPIST
               10        20        30        40         50         

           60        70        80        90       100       110    
pF1KB6 QWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVF
        :.:.    .   ::..  :  :.  : ::::   .  ::::.: .   ::.:::     
CCDS30 LWYLG----HLLLPSHK-KSIEVQTPGVYRCQTRGAPVSDPIHLSVSNDWLILQVPYAPV
      60            70         80        90       100       110    

          120       130       140       150       160       170    
pF1KB6 TEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGK-
        :::::.:::..: ::.::.. ::..:.: ..:: ..: :.:..  : .: :.:::  . 
CCDS30 FEGEPLVLRCRGWYDKVVYKLHYYHDGQAVRYFHSSANYTVLQARASDSGRYQCSGTMRI
          120       130       140       150       160       170    

               180       190       200         210       220       
pF1KB6 ----HRYTSAGISVTVKELFPAPVLNASVTSPLLEGNL--VTLSCETKLLLQRPGLQLYF
             . :: ..:::.::: :::: .        . :  :.: :.:.:  :.    : :
CCDS30 PVESAPMFSAKVAVTVQELFRAPVLRVMGPREARGAALGGVVLRCDTRLHPQKRDTPLQF
          180       190       200       210       220       230    

       230       240       250       260       270       280       
pF1KB6 SFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPT
       .::  :...:  . ..:: .   . :.   :::::::   .: :::: :.:         
CCDS30 AFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSPLDP
          240       250       260       270       280       290    

       290       300       310       320       330       340       
pF1KB6 PVWFHVLFYLAVGIMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHL
                                                                   
CCDS30 ASTTAPAPWAAALAPGNRPLSFRKPPVSRSVPLVTSVRNTTSTGLQFPASGAPTAGPPAC
          300       310       320       330       340       350    

>>CCDS72846.1 FCGR1B gene_id:2210|Hs108|chr1              (188 aa)
 initn: 1218 init1: 618 opt: 640  Z-score: 659.6  bits: 129.7 E(32554): 2e-30
Smith-Waterman score: 973; 63.2% identity (64.0% similar) in 272 aa overlap (103-374:11-188)

             80        90       100       110       120       130  
pF1KB6 TSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLV
                                     :::::::::::: :::::::::::::::::
CCDS72                     MWFLTTLLLWGWLLLQVSSRVFMEGEPLALRCHAWKDKLV
                                   10        20        30        40

            140       150       160       170       180       190  
pF1KB6 YNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::          
CCDS72 YNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGIS----------
               50        60        70        80        90          

            200       210       220       230       240       250  
pF1KB6 VLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARR
                                                                   
CCDS72 ------------------------------------------------------------
                                                                   

            260       270       280       290       300       310  
pF1KB6 EDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVGIMFLVNTVLWVT
                               .  : :::::::::::::::::::::::::::::::
CCDS72 ------------------------QYTVKGLQLPTPVWFHVLFYLAVGIMFLVNTVLWVT
                                      100       110       120      

            320       330       340       350       360       370  
pF1KB6 IRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQLQEGVHRKEPQG
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 IRKELKRKKKWNLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQLQEGVHRKEPQG
        130       140       150       160       170       180      

         
pF1KB6 AT
       ::
CCDS72 AT
         

>>CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1              (233 aa)
 initn: 563 init1: 538 opt: 586  Z-score: 603.7  bits: 119.7 E(32554): 2.6e-27
Smith-Waterman score: 586; 41.6% identity (68.7% similar) in 233 aa overlap (1-228:1-228)

                  10         20        30        40        50      
pF1KB6 MWFL---TTLLLWVPVDGQV-DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQW
       :: :   :.::: : .  .. :  :::. :.: : ::.....:::.:.  . : ..::::
CCDS41 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQW
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB6 FLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTE
       : : .  .... :: : .:.:::::::::: .::  :::.:::.: ::::::.   :: :
CCDS41 FHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB6 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM-GKHR
        .:. ::::.::.  ...: : .:::  :.:: ::.. : :.... .:.: : :. :.. 
CCDS41 EDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKN
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB6 YTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKT
        .:  ...:. . . . ... : . :   :  :.. : . .::      ::::       
CCDS41 VSSETVNITITQGLAVSTIS-SFSPP---GYQVSF-CLVMVLLFAVDTGLYFSVKTNI  
              190       200           210        220       230     

         240       250       260       270       280       290     
pF1KB6 LRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLF

>>CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1              (269 aa)
 initn: 538 init1: 538 opt: 586  Z-score: 602.8  bits: 119.7 E(32554): 3e-27
Smith-Waterman score: 586; 41.6% identity (68.7% similar) in 233 aa overlap (1-228:37-264)

                                                10         20      
pF1KB6                               MWFL---TTLLLWVPVDGQV-DTTKAVITL
                                     :: :   :.::: : .  .. :  :::. :
CCDS58 ERLFTPSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
         10        20        30        40        50        60      

         30        40        50        60        70        80      
pF1KB6 QPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQ
       .: : ::.....:::.:.  . : ..::::: : .  .... :: : .:.::::::::::
CCDS58 EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQ
         70        80        90       100       110       120      

         90       100       110       120       130       140      
pF1KB6 RGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF
        .::  :::.:::.: ::::::.   :: : .:. ::::.::.  ...: : .:::  :.
CCDS58 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY
        130       140       150       160       170       180      

        150       160       170        180       190       200     
pF1KB6 FHWNSNLTILKTNISHNGTYHCSGM-GKHRYTSAGISVTVKELFPAPVLNASVTSPLLEG
       :: ::.. : :.... .:.: : :. :..  .:  ...:. . . . ... : . :   :
CCDS58 FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTIS-SFSPP---G
        190       200       210       220       230        240     

         210       220       230       240       250       260     
pF1KB6 NLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATE
         :.. : . .::      ::::                                     
CCDS58 YQVSF-CLVMVLLFAVDTGLYFSVKTNI                                
             250       260                                         

>>CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1              (254 aa)
 initn: 556 init1: 531 opt: 578  Z-score: 595.1  bits: 118.2 E(32554): 8e-27
Smith-Waterman score: 578; 40.3% identity (68.7% similar) in 233 aa overlap (1-228:1-228)

                  10         20        30        40        50      
pF1KB6 MWFL---TTLLLWVPVDGQV-DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQW
       :: :   :.::: : .  .. :  :::. :.: :  :.....:::.:.  . : ..::::
CCDS44 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB6 FLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTE
       : : .  .... :: : .:.:.:::::::: .::  :::.:::.: ::::::.   :: :
CCDS44 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB6 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM-GKHR
        .:. ::::.::.  ...: : .:::. :.:: ::.. : :.... .:.: : :. :.. 
CCDS44 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB6 YTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKT
        .:  ...:. . . .    ....: .  :  :.. : . .::      ::::       
CCDS44 VSSETVNITITQGLAV----STISSFFPPGYQVSF-CLVMVLLFAVDTGLYFSVKTNIRS
              190           200       210        220       230     

         240       250       260       270       280       290     
pF1KB6 LRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLF
                                                                   
CCDS44 STRDWKDHKFKWRKDPQDK                                         
         240       250                                             

>>CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1               (290 aa)
 initn: 531 init1: 531 opt: 578  Z-score: 594.2  bits: 118.3 E(32554): 8.9e-27
Smith-Waterman score: 578; 40.3% identity (68.7% similar) in 233 aa overlap (1-228:37-264)

                                                10         20      
pF1KB6                               MWFL---TTLLLWVPVDGQV-DTTKAVITL
                                     :: :   :.::: : .  .. :  :::. :
CCDS12 ERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
         10        20        30        40        50        60      

         30        40        50        60        70        80      
pF1KB6 QPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQ
       .: :  :.....:::.:.  . : ..::::: : .  .... :: : .:.:.::::::::
CCDS12 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
         70        80        90       100       110       120      

         90       100       110       120       130       140      
pF1KB6 RGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF
        .::  :::.:::.: ::::::.   :: : .:. ::::.::.  ...: : .:::. :.
CCDS12 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
        130       140       150       160       170       180      

        150       160       170        180       190       200     
pF1KB6 FHWNSNLTILKTNISHNGTYHCSGM-GKHRYTSAGISVTVKELFPAPVLNASVTSPLLEG
       :: ::.. : :.... .:.: : :. :..  .:  ...:. . . .    ....: .  :
CCDS12 FHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAV----STISSFFPPG
        190       200       210       220       230           240  

         210       220       230       240       250       260     
pF1KB6 NLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATE
         :.. : . .::      ::::                                     
CCDS12 YQVSF-CLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK           
             250       260       270       280       290           

>>CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1              (316 aa)
 initn: 531 init1: 531 opt: 575  Z-score: 590.6  bits: 117.7 E(32554): 1.4e-26
Smith-Waterman score: 575; 43.5% identity (70.5% similar) in 207 aa overlap (1-202:16-215)

                                 10        20        30        40  
pF1KB6                MWFL---TTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLH
                      .:.:   :.::: . .:.:.   :::. :.:::..:.::..::: 
CCDS30 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAPPKAVLKLEPPWINVLQEDSVTLT
               10        20        30        40        50        60

             50        60         70        80        90       100 
pF1KB6 CEVLHLPGSSSTQWFLNGTATQTST-PSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIH
       :.  . : :.: ::: ::.   : : ::::. .:. :::::: :: : .. :::..: . 
CCDS30 CQGARSPESDSIQWFHNGNLIPTHTQPSYRF-KANNNDSGEYTCQTGQTSLSDPVHLTVL
               70        80        90        100       110         

             110       120       130       140       150       160 
pF1KB6 RGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNIS
         ::.::.    : ::: . ::::.:::: . .: ...:::. :: : . ...: ..: :
CCDS30 SEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHS
     120       130       140       150       160       170         

             170        180       190       200       210       220
pF1KB6 HNGTYHCSG-MGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQR
       :.: :::.: .:   ..:  ...::.    .: ...:  ::.                  
CCDS30 HSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSS--SPMGIIVAVVIATAVAAIVAA
     180       190       200           210         220       230   

              230       240       250       260       270       280
pF1KB6 PGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQV
                                                                   
CCDS30 VVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPR
           240       250       260       270       280       290   




374 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:27:52 2016 done: Sat Nov  5 11:27:53 2016
 Total Scan time:  2.520 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com