GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:15:54

Sequence gi568815597r:211563429_211775479 : 212051 bp : 44.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   3921   3916    6                               1.05
 1.03 Term -  12472  11960  513  1  0   28   47   181 0.545   2.34
 1.02 Intr -  14395  14295  101  2  2   96   43    35 0.326  -0.37
 1.01 Init -  15184  14563  622  1  1  110   99  1171 0.859 113.91
 1.00 Prom -  31269  31230   40                              -5.06

 2.03 PlyA -  36106  36101    6                               1.05
 2.02 Term -  42912  42680  233  1  2   65   41   134 0.707   3.04
 2.01 Init -  46075  46045   31  1  1   54  113    46 0.494   3.61
 2.00 Prom -  49283  49244   40                              -2.86

 3.00 Prom +  54862  54901   40                              -5.46
 3.01 Init +  55228  55290   63  0  0   87   57    26 0.426   0.55
 3.02 Term +  57875  58177  303  1  0   68   48   198 0.508   8.97
 3.03 PlyA +  59049  59054    6                               1.05

 4.00 Prom +  62456  62495   40                              -2.26
 4.01 Init +  79898  80057  160  1  1   55   89    78 0.338   4.62
 4.02 Intr +  84269  84301   33  0  0   84   94    19 0.365   0.29
 4.03 Intr +  84381  84600  220  1  1   33   52   139 0.298   2.16
 4.04 Intr +  87227  87387  161  2  2   43   97    63 0.269   2.33
 4.05 Term +  87877  88004  128  2  2   73   38    47 0.131  -3.36
 4.06 PlyA +  92785  92790    6                               1.05

 5.03 PlyA -  93048  93043    6                               1.05
 5.02 Term -  97626  97040  587  1  2  -29   48   694 0.973  48.38
 5.01 Init -  97824  97635  190  0  1   56    1   212 0.972   8.47
 5.00 Prom -  98394  98355   40                             -12.01

 6.10 PlyA -  99371  99366    6                               1.05
 6.09 Term - 100224  99998  227  1  2   72   42   173 0.513   8.04
 6.08 Intr - 103803 103678  126  1  0   75   80   133 0.951  11.85
 6.07 Intr - 105904 105685  220  1  1   87   94   147 0.999  13.07
 6.06 Intr - 106979 106853  127  1  1   91   98   106 0.999  12.58
 6.05 Intr - 107856 107774   83  0  2   99  101    39 0.999   4.74
 6.04 Intr - 110295 110055  241  2  1   46   95   190 0.682  13.05
 6.03 Intr - 111085 110868  218  1  2   56  121   242 0.999  21.60
 6.02 Intr - 112135 111956  180  1  0   69  105   227 0.967  22.56
 6.01 Init - 118710 118567  144  0  0  100  102    57 0.589   8.50
 6.00 Prom - 132556 132517   40                              -5.86

 7.11 PlyA - 132819 132814    6                               1.05
 7.10 Term - 133231 133139   93  1  0  117   54    62 0.815   3.53
 7.09 Intr - 143854 143737  118  0  1   63   37    83 0.098   1.17
 7.08 Intr - 149946 149889   58  1  1  126  103    18 0.123   5.04
 7.07 Intr - 156687 156557  131  2  2   47   78    18 0.004  -2.96
 7.06 Intr - 168039 168001   39  2  0  108   53    65 0.037   2.34
 7.05 Intr - 174277 173993  285  0  0   84   76    91 0.243   3.96
 7.04 Intr - 185393 185337   57  1  0   73   96    61 0.295   3.40
 7.03 Intr - 186622 186511  112  2  1  100   32    35 0.340  -1.46
 7.02 Intr - 187639 187533  107  0  2   65   86    95 0.892   6.86
 7.01 Init - 207531 207524    8  0  2  102   91    12 0.168   2.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_1|411_aa
MGCWGRNRGRLLCMLALTFMFMVLEVVVSRVTSSLAMLSDSFHMLSDVLALVVALVAERF
ARRTHATQKNTFGWIRAEVMGALVNAIFLTGLCFAILLEAIERFIEPHEMQQPLVVLGVG
VAGLLVNVLGLCLFHHHSGFSQDSGHGHSHGGHGHGHGLPKGPRVKSTRPGSSDINVAPG
EQGPDQEETNTLVANTSNSNGLKLDPAGNQNPLSRVQGAGDASGIFVGGGCGSDPKKKGQ
EESALILLQTVPKQIDIRNLIKELRNVEGVEEVHELHVWQLAGSRIIATAHIKCEDPTSY
MEVAKTIKDVFHNHGIHATTIQPEFASVGSKSSVVPCELACRTQCALKQCCGTLPQAPSG
KDAEKTPAVSISCLELSNNLEKKPRRTKAENIPAVVIEIKNMPNKQPESSL

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_1|1236_bp
atggggtgttggggtcggaaccggggccggctgctgtgcatgctggcgctgaccttcatg
ttcatggtgctggaggtggtggtgagccgggtgacctcgtcgctggcgatgctctccgac
tccttccacatgctgtcggacgtgctggcgctggtggtggcgctggtggccgagcgcttc
gcccggcggacccacgccacccagaagaacacgttcggctggatccgagccgaggtaatg
ggggctctggtgaacgccatcttcctgactggcctctgtttcgccatcctgctggaggcc
atcgagcgcttcatcgagccgcacgagatgcagcagccgctggtggtccttggggtcggc
gtggccgggctgctggtcaacgtgctggggctctgcctcttccaccatcacagcggcttc
agccaggactccggccacggccactcgcacgggggtcacggccacggccacggcctcccc
aaggggcctcgcgttaagagcacccgccccgggagcagcgacatcaacgtggccccgggc
gagcagggtcccgaccaggaggagaccaacaccctggtggccaataccagcaactccaac
gggctgaaattggaccccgcaggaaatcagaaccccctcagtcgggtgcaaggagccggc
gacgcgtctggcatatttgtaggtgggggctgtgggtcagaccctaagaaaaagggtcag
gaggaatctgctcttattcttctacaaactgttcctaaacaaattgatatcagaaatttg
ataaaagaacttcgaaatgttgaaggagttgaggaagttcatgaattacatgtttggcaa
cttgctggaagcagaatcattgccactgctcacataaaatgtgaagatccaacatcatac
atggaggtggctaaaaccattaaagacgtttttcataatcacggaattcacgctactacc
attcagcctgaatttgctagtgtaggctctaaatcaagtgtagttccgtgtgaacttgcc
tgcagaacccagtgtgctttgaagcaatgttgtgggacactaccacaagccccttctgga
aaggatgcagaaaagaccccagcagttagcatttcttgtttagaacttagtaacaatcta
gagaagaagcccaggaggactaaagctgaaaacatccctgctgttgtgatagagattaaa
aacatgccaaacaaacaacctgaatcatctttgtga

>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_2|87_aa
MEKHEEDLGQAQKDSPEKCHLLIPFAYQEPPLWTQEQGLCPLKHVTAEDGRLHLNMTRGL
LGRKNGDGSCRGNEQLPPHMPYKACMG

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_2|264_bp
atggaaaagcatgaagaggacctggggcaagcccaaaaagattccccggagaaatgccat
ttactaatacccttcgcctatcaggaaccacccctgtggacccaggaacagggtctgtgt
cccttgaagcacgtgacagcagaggacgggaggctccacctgaacatgaccaggggtctc
ctggggaggaaaaatggagatggaagctgcagaggaaacgaacagctgcccccacacatg
ccgtacaaggcctgcatgggatga

>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_3|121_aa
MTPRCGLVVFSSDGRENKIREGHSPSLGSPMSGPIRPLFLPDCVLAKSCHREPVGGGSDS
FFMHPGGSQFRFWIPGHDFPELSIYTSSPALLHKSMAKRGLMTSQRRASPPPGKQMGEPM
L

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_3|366_bp
atgactccaagatgtggcctagtagtattttcatctgacggacgagagaacaagattaga
gagggccacagccctagcctcggatcccccatgtctgggcccatccgcccattgttcctg
cctgactgtgttcttgccaagagctgccacagggagccagtcggaggaggttccgatagc
ttcttcatgcatcctggaggaagccagttccgcttctggattcccggccacgacttccca
gaactcagcatctacacctccagcccagccctgctgcacaagagcatggctaagagagga
ctgatgacttctcagagaagggcctccccacctcctgggaagcaaatgggagaacctatg
ctctga

>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_4|233_aa
MNAGCPVASPTRPPCWKAFLTISLINKAKVKAAAHGESRESLWEVHCPAMPLNDEGVEIK
GTVPEGSCPCSPKTVSGQTQLGVCCLAWCSWLGVCCLDSSRFKGSQTFLGSKLPGLIKLW
AMAVPRKPQNPIKGVPIRNSGSPHGIAQGSGGMGPQLLFAQLSALGDCLVHELGWPSLSL
AILGTSAVDILVSWAWRGALIPFSFSLDILNIFATRQWATDELHQYPQSLLEM

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_4|702_bp
atgaatgccggctgtcctgtggcctccccgacacgtcccccctgctggaaggctttcctc
accatctccctcataaacaaagccaaggtcaaggctgcagcccatggtgagagcagggag
agcttgtgggaagttcactgccccgccatgcccctgaatgatgaaggagtagaaattaag
ggcacagtgccagaaggaagctgcccgtgctctccaaagacagtgtctggtcagacccag
cttggtgtctgctgcctggcttggtgctcctggcttggtgtctgctgcctggacagttcc
agattcaagggcagccaaacatttctgggcagcaagctccctggcctgatcaagctctgg
gccatggctgtgccccgcaaaccccagaacccaataaaaggagtccccattaggaactct
ggaagtcctcatggcattgctcaagggagtggtgggatgggtccccagctgctctttgca
cagctctctgctctaggtgactgtctggtccatgagctgggctggcccagtctgtctctg
gcaatcctggggacatctgctgttgacatccttgtttcctgggcctggaggggagctcta
atccctttcagttttagccttgatatccttaacatctttgccactagacagtgggccacg
gacgagctgcatcagtatccccagagcttattagaaatgtag

>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_5|258_aa
MNGDQKSDAYAQEKQDFIQHFSRIVRVLTEDEMGHPETGDAIAQLKEVLEYNAIGGKLSP
GFDAFRELVEPRKQDADSFQRALMVGWCVELLQAFFLVVDDITDSSLTHWGQICWYQKLG
VGLDAVNDAMLLEACIYCLLKLCCWEQPYYLNLIELFLQSSYQTEIGQTLDPITAPPGQC
GSSQIQGKELQIVKYKTVFYSFYLPIAAAMHMAGIDGEKAHTNAKKILLEMGEFFKIQDD
HFDLFGDSTVTDKVGTAI

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_5|777_bp
atgaatggagatcaaaaatcagatgcttatgcccaagaaaaacaggatttcattcagcac
ttctcccggattgttagggtgctgactgaggatgagatggggcacccagagacaggagat
gctatcgcccagctcaaggaggtcctggagtacaatgccatcggaggcaagttatcaccg
gggtttgacgcattccgggagctggtggagccaaggaaacaggatgctgatagtttccag
cgggccctgatggtgggttggtgtgtggaactgctgcaagctttcttcctcgtggtagat
gacatcacggattcatccctcacccactggggacagatctgctggtatcagaagctgggc
gtgggtttggatgctgtcaatgatgctatgcttctggaagcatgtatctactgcctgctg
aagctctgttgttgggagcagccctattacctgaacctgattgagctcttcctgcagagt
tcctatcagactgagattgggcagaccctggaccccatcacagcacccccagggcaatgt
ggatcttcgcagattcaaggaaaagaattacaaattgtcaagtacaagacagttttctac
tctttctaccttcctatagctgcagccatgcatatggcaggcattgatggtgagaaggca
cacaccaatgccaagaagatcctgctggagatgggagagttctttaagattcaggatgat
cactttgacctctttggggactccactgtgactgacaaagttggcactgccatctag

>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_6|521_aa
MAPLHSSLGDRVSKQTNKHTKKTELEEPGNLELKLTAPTITVLPPMEKVPGVPGPWSSAL
GGATCVRQRDSGDWPAMPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM
TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE
RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR
ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL
AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIADLVADEQRRNLE
RRGRQLGEPEKSQDSSPVLSELKLKEIQLQERERALKAREERLEQKEQELCVRERLAEDK
LARAENLLKNYSLLKERKFLSLASNPELLNLPSSVIKKKVHFSGESKENIMRSENSESQL
TSKSKCKDLKKRLHAAQLRAQALSDIEKNYQLKSRQILGMR

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_6|1566_bp
atggcacccctgcactccagcctgggtgacagagtgagcaaacaaaccaacaaacacaca
aagaagacagaactagaagagcctgggaacctggagctcaagctcactgctcctaccatc
actgtgctgcccccgatggaaaaggtccctggagttcctggtccctggagctccgcactt
ggcggcgcaacctgcgtgaggcagcgcgactctggcgactggccggccatgccttcccgg
gctgaggactatgaagtgttgtacaccattggcacaggctcctacggccgctgccagaag
atccggaggaagagtgatggcaagatattagtttggaaagaacttgactatggctccatg
acagaagctgagaaacagatgcttgtttctgaagtgaatttgcttcgtgaactgaaacat
ccaaacatcgttcgttactatgatcggattattgaccggaccaatacaacactgtacatt
gtaatggaatattgtgaaggaggggatctggctagtgtaattacaaagggaaccaaggaa
aggcaatacttagatgaagagtttgttcttcgagtgatgactcagttgactctggccctg
aaggaatgccacagacgaagtgatggtggtcataccgtattgcatcgggatctgaaacca
gccaatgttttcctggatggcaagcaaaacgtcaagcttggagactttgggctagctaga
atattaaaccatgacacgagttttgcaaaaacatttgttggcacaccttattacatgtct
cctgaacaaatgaatcgcatgtcctacaatgagaaatcagatatctggtcattgggctgc
ttgctgtatgagttatgtgcattaatgcctccatttacagcttttagccagaaagaactc
gctgggaaaatcagagaaggcaaattcaggcgaattccataccgttactctgatgaattg
aatgaaattattacgaggatgttaaacttaaaggattaccatcgaccttctgttgaagaa
attcttgagaaccctttaatagcagatttggttgcagacgagcaaagaagaaatcttgag
agaagagggcgacaattaggagagccagaaaaatcgcaggattccagccctgtattgagt
gagctgaaactgaaggaaattcagttacaggagcgagagcgagctctcaaagcaagagaa
gaaagattggagcagaaagaacaggagctttgtgttcgtgagagactagcagaggacaaa
ctggctagagcagaaaatctgttgaagaactacagcttgctaaaggaacggaagttcctg
tctctggcaagtaatccagaacttcttaatcttccatcctcagtaattaagaagaaagtt
catttcagtggggaaagtaaagagaacatcatgaggagtgagaattctgagagtcagctc
acatctaagtccaagtgcaaggacctgaagaaaaggcttcacgctgcccagctgcgggct
caagccctgtcagatattgagaaaaattaccaactgaaaagcagacagatcctgggcatg
cgctag

>gi568815597r:211563429_211775479|GENSCAN_predicted_peptide_7|335_aa
MLRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNL
WIFLIQSFAFLSGYMWTCADSSLLNHYIKELPLSGGLSPSSKLPGRTSYVVCVTQYKMKM
RLPVQRALRISSRQQKSSKTQAPHEGCPVMRTTKEEMRNGKEPGPWGWSMSPCCPSCQGT
AQDVLREEEMSGDLKSKIKVSARDFSQCISKEGKETQIRKKEVKLFILRLYEENLIDSTN
KLLELISPGILATVCLCEHDYSRYLINILPEGGIDPDPKRGFLDFTQERIQGESAVQSES
KFIKKGWLRHEGSDSPGDTQNLTNMEESGKTLGPP

>gi568815597r:211563429_211775479|GENSCAN_predicted_CDS_7|1008_bp
atgctcaggatctttccaattaaagatgtacccctggagactgatgaccttaccacttgg
ctctatcagcggtttgttgaaaaagaagacctcttatcacatttttatgaaacaggagct
tttccaccttccaagggccataaggaagctgtttccagggagatgaccctcagcaacttg
tggatatttctcatacagtcttttgcatttttgtcaggctatatgtggacctgtgcagac
agtagtctgttgaatcattacatcaaggagctgcccctgtcaggaggcctctccccaagc
agcaaactaccaggcaggaccagctacgttgtctgtgtgacccagtacaaaatgaaaatg
cgactccctgttcaaagagcattacgaatttcaagtcggcaacagaagagcagtaaaacg
caggcacctcatgaaggctgccctgtcatgagaaccacgaaggaggaaatgaggaatggg
aaggagccaggcccctgggggtggtccatgtccccttgttgtccctcctgccaaggcact
gcacaagatgttcttagagaggaggagatgtcaggagacctgaagtccaaaatcaaggtg
tcagcaagagacttcagccaatgcataagtaaagaaggaaaagaaacacagattagaaag
aaagaagttaaactgtttattctcagattatatgaagaaaatctgattgactctacaaat
aagctactagagctaataagccctggcatccttgctactgtctgcctctgtgaacatgac
tactctaggtacctcataaacatcttaccagaagggggtatcgatccagaccccaagaga
gggttcttggatttcacgcaagaaagaattcagggcgagtccgcagtgcaaagtgaaagc
aagtttattaagaaaggatggctgaggcatgagggctctgacagccctggagacacacag
aacctcaccaatatggaagagtctgggaaaaccttggggccaccctga