GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:13:58

Sequence gi568815580r:25932398_26190569 : 258172 bp : 37.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    120    202   83  2  2   76  107    27 0.228   3.89
 1.02 Intr +  10098  10229  132  0  0   77   47   106 0.121   4.24
 1.03 Term +  17274  17421  148  0  1   37   43    88 0.072  -4.41
 1.04 PlyA +  17469  17474    6                               1.05

 2.04 PlyA -  18477  18472    6                               1.05
 2.03 Term -  21008  20819  190  1  1   51   42   227 0.921  10.34
 2.02 Intr -  21972  21719  254  0  2   77   98   179 0.589  13.11
 2.01 Init -  25079  24939  141  2  0   41   54   165 0.546   8.58
 2.00 Prom -  33116  33077   40                              -3.45

 3.13 PlyA -  33128  33123    6                               1.05
 3.12 Term -  44442  44288  155  1  2   42   45   139 0.306   2.10
 3.11 Intr -  49552  49522   31  1  1   89   75    35 0.052  -0.91
 3.10 Intr -  90260  90174   87  2  0  123   63    33 0.450   3.55
 3.09 Intr - 100135 100002  134  2  2   75  111   140 0.989  14.44
 3.08 Intr - 102730 102608  123  2  0   88   55   194 0.989  15.74
 3.07 Intr - 103526 103434   93  0  0   20   55   140 0.865   2.92
 3.06 Intr - 106262 106158  105  0  0   76   44   100 0.912   3.67
 3.05 Intr - 107059 106892  168  2  0   99   90    99 0.063  10.20
 3.04 Intr - 120448 120227  222  2  0   78   88   115 0.153   7.68
 3.03 Intr - 125345 125192  154  2  1   74  119   146 0.794  15.02
 3.02 Intr - 126965 126826  140  0  2   87   75    32 0.785   1.06
 3.01 Init - 130182 130122   61  0  1   78   68    29 0.735   1.36
 3.00 Prom - 131284 131245   40                              -4.55

 4.04 PlyA - 131337 131332    6                               1.05
 4.03 Term - 158262 157849  414  0  0   22   34   344 0.590  16.68
 4.02 Intr - 159038 158878  161  0  2   21   69   145 0.381   4.69
 4.01 Init - 166721 166715    7  2  1   62   89     0 0.096  -1.42
 4.00 Prom - 178993 178954   40                              -6.15

 5.00 Prom + 179521 179560   40                              -4.35
 5.01 Init + 189198 189480  283  2  1   83   74   246 0.370  19.95
 5.02 Intr + 190867 191060  194  2  2   17  106    72 0.256   0.19
 5.03 Term + 194015 194431  417  1  0   -7   42   219 0.264   2.09
 5.04 PlyA + 196147 196152    6                               1.05

 6.00 Prom + 199593 199632   40                              -4.45
 6.01 Init + 201569 201670  102  1  0   74   77    96 0.324   7.39
 6.02 Intr + 212162 212288  127  1  1   46   80   121 0.578   6.43
 6.03 Intr + 219461 219585  125  0  2   57  115   101 0.937   9.08
 6.04 Intr + 225725 225847  123  1  0   66  113    93 0.975   9.46
 6.05 Term + 229137 229235   99  2  0   50   54    47 0.307  -5.35
 6.06 PlyA + 230176 230181    6                               1.05

 7.02 PlyA - 230671 230666    6                               1.05
 7.01 Sngl - 238889 238326  564  2  0   73   34   422 0.907  31.19
 7.00 Prom - 241479 241440   40                              -2.35

 8.00 Prom + 242155 242194   40                              -9.85
 8.01 Init + 242286 242288    3  2  0   56   95     0 0.450  -2.45
 8.02 Intr + 246433 246552  120  0  0   70  100   147 0.977  13.87
 8.03 Intr + 246671 246733   63  1  0   71  115    30 0.771   2.00
 8.04 Term + 251084 251251  168  1  0   34   44   140 0.627   1.10
 8.05 PlyA + 251320 251325    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_1|120_aa
MKICWNILSTTEFIENEIKGFWEKIDVWFSQLQFPEEQSSFAYPANCVKSKGMNTKLPLR
PLKVCRELTIDRKGSHMYLIQLHRALGSTEHHLKTTELDLHLHNILKVLRNQQEERQINQ

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_1|363_bp
atgaagatttgctggaatatattgagtacaacagagtttatagaaaatgaaatcaagggc
ttctgggagaaaattgatgtctggttctcacaactgcagtttccagaggaacagagcagt
tttgcatatcctgccaactgtgtcaaatctaaaggaatgaatacaaaacttccccttcgc
cctctgaaggtttgccgtgaactgacaatagacaggaagggcagccacatgtacctcata
cagctccacagagccttgggctccacggaacaccatttgaaaaccacagaactggacttg
catcttcacaatatattaaaagttcttagaaatcaacaagaagaaagacaaattaaccaa
tag

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_2|194_aa
MHKASFECEDEFHVWLGVEQRKTQEVQSEGSGELEEEEGRVRSGWGNGLGHTRVATQSAH
SILSSTPPDFSPTNVCPLSLLRAGGVHTGGDAAALERLTWEGTMHRLWDPGQGILESRVP
ETQSNIVAKDSGLQHRSLPEDTGHEGNEEEQAEQHAGIPAPATPHAALGGGKLKLTVPDA
ANTRAGIVWHLQTH

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_2|585_bp
atgcacaaagccagctttgagtgtgaagatgagtttcatgtttggcttggtgtggagcag
aggaaaacccaggaggtgcagagtgagggaagtggagagctagaagaagaggaaggcaga
gttagaagtggctgggggaatggccttgggcacacacgtgtggcaacccagtctgcacat
tcaattctatcctcaactcccccggacttcagccccacaaacgtctgccccttgtcactt
cttagggctgggggtgtgcacactggtggggatgcagctgcccttgagaggttgacttgg
gaaggcaccatgcacaggctctgggaccctggacagggcattctggagtcccgggtgcct
gaaacacagtctaatattgtggccaaggactcaggactgcaacacagaagccttccggaa
gatactggacatgaagggaatgaagaggaacaagcagagcagcatgctggaattcctgca
cctgccactccccatgctgcccttgggggtggaaagctcaagctcactgtccctgatgcc
gccaacaccagagcaggaattgtctggcatctgcaaactcattaa

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_3|490_aa
MGPFTFNVEHDIVGFVSYKAVQLDCTFYLSCISLLLSKLKEKAKIIVELVLYASVLSGVV
APSVPLCPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGP
NHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY
GPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQI
PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGY
DRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQG
GPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQTLSLISLSQNIWQTQPQFPF
VHCRLETLKEHKAMNFMQIVRPVLEKARAASHDQPRTEYTKGRSWLQYNHSNSIHCGKTH
KQLENVKGES

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_3|1473_bp
atgggtccatttacatttaatgtagaacatgatatagtaggatttgtgtcttacaaggca
gtccaattggactgcactttctacttgagctgtatttccctgttactcagcaaactcaag
gaaaaagccaagataattgtggagctggtcttatatgcttccgttctttcaggagttgta
gccccttctgttcctctttgtccacccacacagaatatgcctatgggtcctggagggatg
aatcagagcggccctcccccacctccacgctctcacaacatgccttcagatggaatggta
ggtgggggtcctcctgcaccgcacatgcagaaccagatgaacggccagatgcctgggcct
aaccatatgcctatgcagggacctggacccaatcaactcaatatgacaaacagttccatg
aatatgccttcaagtagccatggatccatgggaggttacaaccattctgtgccatcatca
cagagcatgccagtacagaatcagatgacaatgagtcagggacaaccaatgggaaactat
ggtcccagaccaaatatgagtatgcagccaaaccaaggtccaatgatgcatcagcagcct
ccttctcagcaatacaatatgccacagggaggcggacagcattaccaaggacagcagcca
cctatgggaatgatgggtcaagttaaccaaggcaatcatatgatgggtcagagacagatt
cctccctatagacctcctcaacagggcccaccacagcagtactcaggccaggaagactat
tacggggaccaatacagtcatggtggacaaggtcctccagaaggcatgaaccagcaatat
taccctgatggtcataatgattacggttatcagcaaccgtcgtatcctgaacaaggctac
gataggccttatgaggattcctcacaacattactacgaaggaggaaattcacagtatggc
caacagcaagatgcataccagggaccacctccacaacagggatatccaccccagcagcag
cagtacccagggcagcaaggttacccaggacagcagcagggctacggtccttcacagggt
ggtccaggtcctcagtatcctaactacccacagggacaaggtcagcagtatggaggatat
agaccaacacagcctggaccaccacagccaccccagcagaggccttatggatatgaccag
actctaagccttatctccttaagtcagaacatctggcagactcagcctcagttccccttc
gtgcactgcagactggaaactctcaaggaacataaggcaatgaacttcatgcagatagta
aggccagtcttggagaaagccagggcagccagccatgaccaaccacgaactgaatataca
aaaggaaggagctggcttcagtacaaccacagtaattccatccactgtggcaagacacat
aaacagttggaaaatgttaaaggagaaagttga

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_4|193_aa
MSWFVPRGELFSVRSSQAGRLPLSTGHNLGVPVSGQGYFPIVRHDFVRACETVDSEVVQP
ERPASLPQFAVHPERSGLADSGDGGNMSVAFAAPRQRGKGEITPAAIQKVKPRGVADARP
LPPLGETDAGGRAGPGVDRAEAEAGLLGISSVWEHGLLAVPEWVAEEGEPVFLGVFHAFT
RFSTDTKAQTAAA

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_4|582_bp
atgtcttggtttgtcccaagaggcgagctcttctctgtccgctccagccaagctggccga
ttgcccctgagcactggacacaaccttggtgtcccggtttcgggtcagggttactttcca
attgttaggcacgactttgtgcgtgcgtgcgagactgtggactcggaggtggttcagccc
gagaggccggcgtctctcccccagtttgccgttcacccggagcgctcgggacttgccgat
agtggtgacggcggcaacatgtctgtggctttcgcggccccgaggcagcgaggcaagggg
gagatcactcccgctgcgattcagaaggtgaaaccgcgcggggttgcggatgccaggccc
ttaccgcctctgggagagacagacgcggggggaagggccgggcccggagtcgaccgggcc
gaggcggaggcgggcctgctgggaatcagcagtgtttgggaacacggactgctggctgtg
cctgagtgggtggcggaagagggtgaaccggtttttctcggagtctttcacgcatttacg
cgtttttctacagacacaaaagcccaaacagccgccgcctga

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_5|297_aa
MAEMTETGFRMWIKMNFSELKEHVATEGKEAKNHDKTMQELTAKIARIERNITDLIELKN
TLQELHNAITSINSRIDQVEKRISELEDCLSEMTAYGTYSKIDHIIGNKTLLSKCKRTEI
ITNSLLDHTRIKLEPKIKKFTQNLTTTWKLNKLLLNDFWKLNKNRKTLHKAKNEDHNYVL
KEWIHWCGSKHMPLNGILIRKQAKIYHDELKTEEDCEYSTSWLQKFKKQHGIKILKLCGD
KVSDDHKAVEKIIHNFAKVIADKNLIPELLLMKILSQNKSIMLIKHHCFGITAPERT

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_5|894_bp
atggctgaaatgacagaaacaggcttcagaatgtggataaaaatgaacttcagtgagcta
aaggagcatgttgcaaccgaaggcaaggaagccaagaatcatgataaaacaatgcaagag
ctgacagccaaaatagccagaatagagaggaacataactgacctgatagagctgaaaaac
acactacaagaacttcacaatgcaattacaagcattaacagcagaatagaccaagtggag
aaaagaatctcagagcttgaagactgtctttctgaaatgacagcatatggcacttactct
aaaattgatcacataatcggaaataaaacactcctcagcaaatgtaaaagaaccgaaatc
ataacaaacagtctcttggaccacaccagaatcaaattagaacccaagattaagaaattc
actcaaaaccttacaactacatggaaattaaacaagctgctcctgaatgacttttggaag
ttaaacaaaaatagaaaaacgctacataaagctaaaaatgaggatcacaattatgtattg
aaagagtggatccactggtgtggcagtaaacacatgcctcttaatggtatactgatcagg
aaacaagcaaagatctatcatgatgaactgaaaactgaggaggactgtgaatactcaaca
agctggttgcagaaatttaagaaacaacatggcattaaaattttaaagctctgtggtgat
aaagtatctgatgaccacaaagcagtggaaaaaatcattcacaactttgccaaagtcatt
gctgataaaaatcttatcccagagttactgctgatgaaaatcttatcccagaacaagtct
ataatgctgataaaacatcattgttttggcattactgcaccagaaagaacctga

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_6|191_aa
MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERT
VRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKY
TQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKFLAQRLCFLEYYDGEESYSGQ
LKWCMAVVLAT

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_6|576_bp
atggcgtctcgatatgacagggcgatcactgtcttctccccagacggacacctttttcaa
gttgaatatgcccaggaagcggtgaagaaaggatccaccgcggtcggaattcgaggtacc
aatatagttgttcttggggtagaaaaaaaatctgttgccaagcttcaagatgaaagaact
gtgaggaaaatttgtgcccttgatgaccatgtctgcatggcttttgcaggacttactgct
gatgctagagtagtaataaacagagcccgtgtggagtgccagagccataagcttacggtt
gaggacccagtcactgtagaatacataactcgcttcatagcaactttaaagcagaaatat
acccaaagcaatggacgaagaccttttggtatttctgccttaattgtaggttttgatgat
gatggtatctcaagattgtatcagacagatccttctggtacttatcatgcttggaagttc
cttgctcagaggctatgttttctagaatactatgatggtgaagaaagctattcaggtcag
ctaaagtggtgcatggcagtagtcctagctacttga

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_7|187_aa
MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS
IPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSS
VYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKF
EVYEKND

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_7|564_bp
atggttggttcgctaaactgcatcgtcgctgtgtcccagaacatgggcatcggcaagaac
ggggacctgccctggccaccgctcaggaatgaattcagatatttccagagaatgaccaca
acctcttcagtagaaggtaaacagaatctggtgattatgggtaagaagacctggttctcc
attcctgagaagaatcgacctttaaagggtagaattaatttagttctcagcagagaactc
aaggaacctccacaaggagctcattttctttccagaagtctagatgatgccttaaaactt
actgaacaaccagaattagcaaataaagtagacatggtctggatagttggtggcagttct
gtttataaggaagccatgaatcacccaggccatcttaaactatttgtgacaaggatcatg
caagactttgaaagtgacacgttttttccagaaattgatttggagaaatataaacttctg
ccagaatacccaggtgttctctctgatgtccaggaggagaaaggcattaagtacaaattt
gaagtatatgagaagaatgattaa

>gi568815580r:25932398_26190569|GENSCAN_predicted_peptide_8|117_aa
MANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAIIRRNQP
LKEFKTLVEEVTADVVQIARELKLEVEPEYATELLQSCDKTDDELLLKDEKRMWFLG

>gi568815580r:25932398_26190569|GENSCAN_predicted_CDS_8|354_bp
atggcaaatgcaataggccgaagtgctaaaactgttcgagaatttctagaaaagaattac
acagaagatgccatagcaagtgacagtgaagctatcaagttagcaataaaagctttgcta
gaagttgtccagtctggtggaaaaaacattgaacttgctataataagaagaaatcaacct
ttgaaggagttcaagactttagtggaggaagtcactgcagatgtggtacaaatagcaaga
gaactaaaattagaagtggagcctgaatatgcaactgaattgctgcaatcttgtgataaa
acagatgatgagttgcttcttaaagatgagaaaagaatgtggtttcttggatga