GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:13:22

Sequence gi568815596f:113790280_114057452 : 267173 bp : 40.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4198   4619  422  0  2   55   89   170 0.798   9.71
 1.02 Intr +   5566   5687  122  1  2   73   33    71 0.564  -0.68
 1.03 Term +   5773   5933  161  2  2   70   41   138 0.349   4.42
 1.04 PlyA +   6961   6966    6                               1.05

 2.10 PlyA -   7677   7672    6                               1.05
 2.09 Term -  13816  13713  104  2  2   60   45    82 0.019  -1.44
 2.08 Intr -  26115  25918  198  1  0   69   68   144 0.261   8.90
 2.07 Intr -  32442  32387   56  2  2   93   88    49 0.497   3.10
 2.06 Intr -  35238  34971  268  1  1   65   81   114 0.297   4.07
 2.05 Intr -  41306  41251   56  1  2  127   98    23 0.934   4.90
 2.04 Intr -  48756  48710   47  0  2   70   92    35 0.326  -1.61
 2.03 Intr -  49914  49864   51  0  0   83   78    55 0.446   2.19
 2.02 Intr -  50331  50076  256  2  1   39   72   159 0.387   5.92
 2.01 Init -  65449  65259  191  1  2   55   92   113 0.445   6.93
 2.00 Prom -  70160  70121   40                              -5.65

 3.00 Prom +  72280  72319   40                              -2.95
 3.01 Init +  73823  73825    3  1  0  108   81     0 0.279   1.35
 3.02 Intr +  95196  95272   77  2  2   50   89    77 0.690   1.39
 3.03 Intr +  99294  99579  286  0  1   97   29   358 0.961  27.22
 3.04 Intr +  99826 100044  219  0  0  -39   74   275 0.985  10.98
 3.05 Intr + 100333 100499  167  0  2   51   82   106 0.600   4.14
 3.06 Intr + 122893 122948   56  1  2   83   95    20 0.160  -0.10
 3.07 Intr + 126605 126729  125  0  2   55   95   129 0.189   9.68
 3.08 Intr + 137066 137176  111  1  0   83  111    38 0.973   5.26
 3.09 Intr + 141022 141117   96  0  0   44  115    72 0.964   4.79
 3.10 Intr + 144000 144107  108  2  0   73   79    92 0.985   6.36
 3.11 Intr + 149680 149823  144  0  0   98   93   153 0.999  16.36
 3.12 Intr + 151907 152080  174  1  0   99   76   111 0.971  10.21
 3.13 Intr + 160485 160739  255  2  0   -5   17   217 0.280   2.02
 3.14 Intr + 161441 161566  126  1  0   92   81    95 0.916   9.16
 3.15 Intr + 165344 165427   84  1  0   57  113    51 0.807   3.60
 3.16 Term + 167081 167176   96  1  0   85   38    54 0.636  -2.91
 3.17 PlyA + 167954 167959    6                               1.05

 4.06 PlyA - 169026 169021    6                               1.05
 4.05 Term - 179668 179025  644  2  2   27   50   231 0.403   6.54
 4.04 Intr - 188836 188679  158  0  2   89   97   113 0.696  11.03
 4.03 Intr - 189436 189212  225  0  0  -24   27   276 0.811   6.48
 4.02 Intr - 189817 189438  380  1  2  -17  -12   372 0.054   9.54
 4.01 Init - 192709 192677   33  1  0  125  127     9 0.892   8.44
 4.00 Prom - 196706 196667   40                              -5.05

 5.03 PlyA - 197175 197170    6                               1.05
 5.02 Term - 204804 204682  123  0  0  152   48    67 0.778   6.50
 5.01 Init - 210010 209834  177  1  0   68   47   137 0.545   6.91
 5.00 Prom - 223181 223142   40                              -3.65

 6.02 PlyA - 223944 223939    6                               1.05
 6.01 Sngl - 227815 227222  594  1  0   88   49   553 0.985  47.34
 6.00 Prom - 249184 249145   40                              -2.75

 7.04 PlyA - 249906 249901    6                               1.05
 7.03 Term - 253217 253147   71  0  2   70   49    91 0.070   0.52
 7.02 Intr - 263965 263833  133  1  1   80   39    64 0.175  -0.00
 7.01 Intr - 266232 266035  198  0  0   89   49   114 0.444   6.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 191743 191576  168  1  0   89   55    62 0.824  -0.10
S.002 Term + 216740 216897  158  0  2   96   54   136 0.834   8.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_1|234_aa
MKVHGRKKGRKEGRKEGRKEGRKEGRKKGRKEGKEGRKEGRKEGRKERKKKKERKKERKK
ERKEKKEKERKREKERKKEGRKEREREKERRKEGRKERKRKRERKKERERKKERGREGKT
VEMEVEERKTCTERKATLQLRVHLRLHYHWLVRDCECTAAQGTAINVSGVDATDLKCSSD
MGRCLQHLQLEAQTGETLLPQIRMADWPSDCDHADEQEGDSCGIPAKFKISVPM

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_1|705_bp
atgaaagtccatggaagaaagaaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaggaaggaaggaagaaaggaaggaaggaagggaaagaaggaaggaaggaagga
aggaaggaaggaaggaaagaaagaaagaaaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaaagaaaagaaagagaaagaaagaaagagagagaaagaaagaaagaaggaagga
aggaaagaaagagagagagagaaagaaagaaggaaggaaggaaggaaagaaagaaagaga
aagagagaaagaaagaaagaaagagaaagaaagaaagaaagagggagggaggggaaaaca
gttgaaatggaggtcgaggagaggaagacatgtacagagagaaaagctacattgcaatta
cgggtccatttgaggctccattaccactggctagttagagattgtgaatgtacagctgca
cagggcacagcaattaatgtttcgggtgtggatgccacagacctgaaatgctcttctgac
atggggagatgtctgcagcacttgcagctggaagcccaaactggagagactctgctgcca
caaataagaatggcagactggccatctgactgtgaccatgcagatgagcaggagggagat
tcttgtgggattccagctaaattcaaaatttcagtgccaatgtga

>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_2|408_aa
MGSVQEEVFNKITVRGKVRESIQLARGILSTGHPRAASQAEGHCRCYSSLWQRKKHPLRG
QHPGSDTVYLEIASDSIGLGLSPQNCPFHRHPLQMWASGTSDQPASSWGSYTFSLRSVNL
LEQLTELRKKVYWFVIKGITKDTDGEMHRGRSISGEDLKTRSQKGGGTLDPLPTPDTVGS
VGKSEGVILACFYKNTVAIDRPDPDIKSVLLHGDSEGGVLEERQDRETEYSKGTQLSTLC
SFSLLFNETRHSSPEVFPHFPFLRRGTSFPALKNSQLKQWKVDPFKPKVRNQYKQQLSTV
HLLYRWPSDFRHPLNTVQLQQHRFELSSSTYIRVFVNKYSRPSLSSGSTSTTKRGRKIQC
SNVKPTIQRASLHTVSDIGIAAVKPYHAMVIFRLACEWKSGFKCGIWT

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_2|1227_bp
atggggtcagttcaggaagaggtttttaataagataacagtcagagggaaggtgagggag
tccattcagttggcaagaggaattttgagcacaggacatccccgagctgcaagtcaggca
gagggacactgcagatgctactcaagtctgtggcagaggaagaagcatccgctcagagga
cagcaccctggttccgacactgtctacctggagatagcatcagattctatcggcttgggg
cttagtccccaaaactgcccattccacagacacccattgcagatgtgggcctctgggact
tccgaccaaccagcttcaagctggggttcctacaccttctctttgcgttcagttaatttg
ctagagcagctcacagaactcaggaaaaaagtttactggtttgttataaagggcattaca
aaggatacagacggagagatgcacaggggcaggagcatctctggagaggatcttaagacc
cgtagtcagaaaggtgggggaaccctggatcctctccctaccccggacacagtaggttca
gttggaaagagcgagggagtaattctagcctgtttttacaagaacacagtggctatagac
aggccagatcctgatataaaaagcgtattacttcatggagattcagaaggaggggttctt
gaggagaggcaggacagagaaacagaatacagcaaagggactcagctgagcacgctctgt
tccttctccctactcttcaacgagacacggcactcctccccggaagtattcccacacttt
cccttcctgaggagaggaacttctttccctgcattgaaaaactcacagttgaaacaatgg
aaagttgatccatttaagcccaaagtaaggaatcaatacaaacagcagctctccacggtc
catttgctttatcggtggccctcggactttcggcatcccctgaacacagtgcagcttcaa
caacaccggtttgaactatcctcgtccacttatatacgagtttttgtcaataaatatagt
cgaccctccttatcctcaggttccacatccacaaccaaaagaggacgaaaaatacagtgt
tctaatgtgaaacctacgatacagagggccagtcttcatacagtttctgacattggaatt
gcggcagtaaagccttatcacgctatggtgatcttcagactagcatgtgagtggaaatct
ggctttaagtgtggaatctggacataa

>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_3|708_aa
MASYQIQALQQPYRLNIPVNFIDEETEKAATQVLRMDVCRGRFRLGRFLSGTGGYSWLQE
ALPPFPQPSKEVTETNPRVTTEKPLPASEAELEARIDFSASTLLENPQWISPTSGSEPRQ
ANPPTEPAAFLLLLRLPGYPPDGEGGPAVDGQIALVSRRQSLAPSSTEQTAAAAAAGEEE
DGGTAAGLCGGLWHGRRPKGAGDGRLGGGPRARPIRLSFPSAPVFASRFGDPGAELGDWP
GRGARKEKRSWYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGD
EAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE
YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY
VIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNK
YDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPELFVLVRFHTANKDIPETG
QFIKERGLIGLMVPRGWGSLTIMAEGKEEQVLSYMMAAGKERMRKTQKQKSLIKPSDLVQ
LIHSMRTNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITH
HMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_3|2127_bp
atggcttcttaccaaattcaagctttacaacaaccctataggttaaatattcctgtgaat
tttatagatgaagaaacagaaaaagcagccactcaagttttaagaatggatgtatgccgc
ggacgttttcgattaggccgttttctctcaggcactggaggatattcgtggctgcaggag
gcgcttccaccctttcctcaacctagcaaagaagtaactgaaactaacccaagggttaca
accgaaaagccccttccagcttcagaagcagaactggaagctcggatagacttctccgcc
tctacactcctggaaaacccgcagtggatttcaccaacttcaggatcggagcccaggcag
gcgaacccgccgaccgagcctgctgctttcttgctactgcttcggcttcccggctacccc
ccggacggtgaaggcggcccagctgtggatggtcagatagcccttgtctcccgccgccaa
tctctggcccctagcagcacggagcagacggcggcagcagcagcagcaggcgaggaggaa
gatggcgggacggctgccggcctgtgtggtggactgtggcacgggcgccgcccaaagggc
gctggggacggtcgtcttgggggtggtccccgggcccgacccatccggctttcctttccc
tccgcgcccgtttttgccagtcggtttggggacccaggggccgagctcggggactggcct
ggcaggggagctagaaaagagaagcgctcctggtatacaaaactaggatatgctggaaat
acagaaccacagtttatcatcccttcctgtattgctattaaggagtcagcaaaagtgggt
gatcaagctcaaaggagggtgatgaaaggtgttgatgacctagacttcttcattggtgat
gaagcaatagaaaaacctacatatgcaacaaagtggccaatccgccatggtatagttgaa
gattgggacttaatggaaaggtttatggagcaagtgatctttaaatatttaagggcagaa
cctgaagaccattattttcttttgactgaacctccattgaatactccagaaaacagggaa
tatactgctgaaataatgtttgagtccttcaatgttccaggcttgtacattgctgtgcag
gctgttcttgccttagctgcatcttggacctcaagacaagtaggagaacggacgttgacc
ggtacggtaatagacagtggagatggtgtcactcatgtcattcctgtggctgaagggtat
gtgattggcagctgtattaaacacattccaatcgcaggacgagatataacatattttatt
cagcaactgctgagagaccgagaagtaggaatccctccagaacaatccttggaaactgct
aaggcagtaaaggagcgctatagttatgtctgcccagatttagtaaaagaatttaacaag
tatgatacagatgggtcaaaatggattaaacagtatactggaatcaatgctatctcaaag
aaagagttttctatcgatgttggttatgagagatttttgggacctgaaatcttttttcat
ccagagctatttgtattagtccgttttcatactgctaataaagacatacctgagactggg
caatttataaaagaaagaggtttaattggacttatggttccacgtggctggggaagcctc
acaatcatggcagaaggcaaggaggagcaagtcctgtcttacatgatggcagcaggcaaa
gagagaatgaggaagacgcaaaagcagaaatccctgataaaaccatcagaccttgtgcaa
cttattcactccatgagaacaaatattgtcctctctggaggttcaaccatgttcagggac
tttggacgtcgcttgcaaagagatttgaaaagaactgtagatgcccggctgaaattaagt
gaggaattgagtggtggtagattgaagccaaaacctattgatgtacaagtcattacacac
cacatgcagcgatatgcagtttggtttggaggatcaatgctggcttccacgcctgagttc
taccaagtatgccacaccaaaaaggattatgaagaaattggacctagcatttgtcgtcac
aatccagtgtttggagtcatgtcgtaa

>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_4|479_aa
MAVSGCQTSYTLLGSEGLALYRRVSPPHVGPMLSPRRVFEKHGMYMAGQGALRIHRDAPS
AATVTASGHQGAARARCGYTGTRPFSRDSNGLRPPGVGQGALRIHRDAPSAATVTASGHQ
GAARARCGYTGTPPQPRHNGLRPPEGGQGALRIHRDAPSAATVTASGHQGAAHGASNCKR
LRASESGRGAESGSQKPVGARMPALSRDRGQRGKPFQCSDSRKQVCVAGSRNFKHQQAEE
STRVEGSPQGVEIKPPREPADPTLSDPFPREGLGQAGLGRRCRKRPRQEENHPGDLETLF
SISKLHQQTHKIVMYKTVFPNWGNKDSCRGRERYHLTIIFFSRMVLSPSHGPREKFSLSP
NSHPPKKIFPGVWKCLRFTHQLEVWPASELRTEAVMRWGFAGSWGCHSRRELCVLQLWLP
LPGGSSRSEEPRMAPLSSGPNLPPSSLNKSTALGIRLAATSHHREDSKLPNLSPLMEQE

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_4|1440_bp
atggcggtctcagggtgtcagacttcttacacgctccttggcagcgagggcctggctctt
tatcgccgtgtgtccccgccccacgtgggtcccatgcttagcccacggcgggtgtttgaa
aagcacggaatgtatatggcgggacagggcgcgctgcggatacaccgggacgccccctca
gccgcgacagtaacggcctccggccaccagggggcagccagggcgcgctgcggatacacc
gggacacgccccttcagccgcgacagtaacggcctccggccaccaggggtcggccagggc
gcgctgcggatacaccgggacgccccctcagccgcgacagtaacggcctccggccaccag
ggggcggccagggcgcgctgcggatacaccgggacgccccctcagccgcgacataacggc
ctccggccaccagagggcggccagggcgcgctgcggatacaccgggacgccccctcagcc
gcgacagtaacggcctccggccaccagggggcggcacacggcgcctcaaactgtaaacgg
ctccgggcttcggaatccgggcggggagcggagagcggttcgcaaaagccagttggtgcc
cggatgccggcattgtcacgggatcgcggccaaagggggaagcctttccagtgttctgat
tccagaaagcaggtgtgtgtggccggttcaaggaatttcaagcatcagcaggcagaggaa
agtaccagagtggaaggcagcccacagggtgtcgaaatcaagccacccagggagcccgca
gatcccaccctctccgacccattccccagagaaggactggggcaggcaggacttggcagg
aggtgtagaaagagacccagacaggaagaaaaccatcctggagacctggagacattgttt
agcatcagcaaactccatcagcagacacataagatagtgatgtataaaacagtgtttccc
aactggggcaataaagacagctgcagagggagagagcgttaccacctcacaataattttc
ttctcaagaatggttctctctccttctcatggtccaagggagaaattcagtttgtccccc
aactcccacccacccaagaaaatatttcctggtgtttggaaatgtctgcgttttacccac
cagttggaggtctggccagcctcagagctgagaaccgaggctgtgatgagatgggggttt
gcaggctcgtggggctgccacagcagaagggagctgtgtgtgcttcagctgtggctgcct
ctcccaggaggttcatcacggtcagaggaacccaggatggctccgttgtcatcagggccc
aatcttccaccatctagccttaataaatctacagcattaggaatcagattggcagcaaca
agtcatcacagagaggacagcaaactccccaacctctcacccttaatggagcaggagtag

>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_5|99_aa
MESKDTCGGFIARSAWSQTQHQPVRASGAALWGAPGAFAFEDVCDLFPLKNRILPGDSES
WDTHLLLPLDIKTPGSLAFRLCDFHQCPPTQFLRPSALN

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_5|300_bp
atggagagtaaggacacctgtggtggatttatagcaagaagtgcttggagccaaacacag
catcagccagtcagagctagtggggcagctctctggggtgcacctggagcgttcgccttt
gaggacgtctgtgacttatttccactaaagaacaggattcttccaggtgacagtgagagc
tgggacacccatcttctcctgcccttggatataaaaactccaggctcgctggccttcagg
ctctgtgactttcatcagtgccccccaacccagttcctcaggccttctgctttgaactaa

>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_6|197_aa
MGTKQSRKTGNSKKQSTSPPPKEHSSSPAMEQSWTENDFDELREEGFRRSNYSELQEEIQ
TKSKEVKNFEKNLDECITRITNTEKCLKELMELKAKARELREECRSLRSRCDQLEERVSV
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVSESDEKNGTKLENTLQD
IIQENFPSLARQANIQI

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_6|594_bp
atggggacaaaacagagcagaaaaactggaaactctaaaaagcagagcacctctcctcct
ccaaaggaacacagttcctcaccagcaatggaacaaagctggacagagaatgactttgat
gagttgagagaagaaggcttcagacgatcaaactactccgagctacaggaggaaattcaa
accaaaagcaaagaagttaaaaactttgaaaaaaatttagatgaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaagccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagtg
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtatctgaaagtgacgagaagaatggaaccaagttggaaaacactctgcaggac
attatccaggagaacttccccagtctagcaaggcaggccaacattcagatttag

>gi568815596f:113790280_114057452|GENSCAN_predicted_peptide_7|133_aa
TIKVWYDKDCPKTSLEFTWGFPDKEPVYTEGSSLLTVGDMHSSSASHNNSAPGRRGIMLP
WAGGHQAWKPAMEKRQWLTLPFFSSLLHLLFYSPAAGIVEIWRLCRSATAGITGITELKQ
YKTSCSRRNEDIA

>gi568815596f:113790280_114057452|GENSCAN_predicted_CDS_7|402_bp
accatcaaagtgtggtatgacaaggactgtccgaaaacgtccttggagttcacatggggt
ttcccagacaaggagccagtatacactgagggctcctcccttctcacagtgggggacatg
cactcaagttcagcttcccacaacaatagtgcccctggcagaaggggcatcatgctccca
tgggccggaggtcaccaggcttggaagcctgccatggagaagaggcagtggttaactcta
cctttcttctcttctctgctccacctcctcttctactcaccagctgctggcatagttgag
atctggagattgtgccgttcggccactgcaggaataactggaatcactgagctcaagcag
tacaagacatcctgttctaggaggaatgaggatatagcctga