Result of FASTA (omim) for pF1KB6623
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6623, 413 aa
  1>>>pF1KB6623 413 - 413 aa - 413 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.3783+/-0.000491; mu= 0.5538+/- 0.031
 mean_var=311.1574+/-63.260, 0's: 0 Z-trim(117.6): 9  B-trim: 347 in 1/54
 Lambda= 0.072708
 statistics sampled from 29804 (29813) to 29804 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.35), width:  16
 Scan time:  7.260

The best scores are:                                      opt bits E(85289)
NP_055856 (OMIM: 616787) clusterin-associated prot ( 413) 2654 292.1 1.7e-78
XP_016878558 (OMIM: 616787) PREDICTED: clusterin-a ( 440) 2606 287.1 5.7e-77
XP_016878561 (OMIM: 616787) PREDICTED: clusterin-a ( 402) 2581 284.5 3.3e-76
NP_001317383 (OMIM: 616787) clusterin-associated p ( 432) 2330 258.2 2.9e-68
XP_016878557 (OMIM: 616787) PREDICTED: clusterin-a ( 459) 2282 253.2   1e-66
XP_016878560 (OMIM: 616787) PREDICTED: clusterin-a ( 421) 2257 250.5 5.8e-66
XP_006720930 (OMIM: 616787) PREDICTED: clusterin-a ( 341) 2165 240.8   4e-63
XP_016878562 (OMIM: 616787) PREDICTED: clusterin-a ( 360) 1841 206.8 7.1e-53
NP_079069 (OMIM: 616787) clusterin-associated prot ( 247) 1595 180.8 3.2e-45


>>NP_055856 (OMIM: 616787) clusterin-associated protein   (413 aa)
 initn: 2654 init1: 2654 opt: 2654  Z-score: 1530.4  bits: 292.1 E(85289): 1.7e-78
Smith-Waterman score: 2654; 100.0% identity (100.0% similar) in 413 aa overlap (1-413:1-413)

               10        20        30        40        50        60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
              310       320       330       340       350       360

              370       380       390       400       410   
pF1KB6 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
              370       380       390       400       410   

>>XP_016878558 (OMIM: 616787) PREDICTED: clusterin-assoc  (440 aa)
 initn: 2606 init1: 2606 opt: 2606  Z-score: 1502.9  bits: 287.1 E(85289): 5.7e-77
Smith-Waterman score: 2606; 99.5% identity (99.8% similar) in 408 aa overlap (6-413:33-440)

                                        10        20        30     
pF1KB6                          MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLV
                                     : .:::::::::::::::::::::::::::
XP_016 RGQNPGGSPWSLWLGSGHIKQTALANWRVLLSDFTEMMRALGYPRHISMENFRTPNFGLV
             10        20        30        40        50        60  

          40        50        60        70        80        90     
pF1KB6 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
             70        80        90       100       110       120  

         100       110       120       130       140       150     
pF1KB6 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
            130       140       150       160       170       180  

         160       170       180       190       200       210     
pF1KB6 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
            190       200       210       220       230       240  

         220       230       240       250       260       270     
pF1KB6 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
            250       260       270       280       290       300  

         280       290       300       310       320       330     
pF1KB6 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
            310       320       330       340       350       360  

         340       350       360       370       380       390     
pF1KB6 PQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTK
            370       380       390       400       410       420  

         400       410   
pF1KB6 PNRRVRKSEPLDESDNDF
       ::::::::::::::::::
XP_016 PNRRVRKSEPLDESDNDF
            430       440

>>XP_016878561 (OMIM: 616787) PREDICTED: clusterin-assoc  (402 aa)
 initn: 2581 init1: 2581 opt: 2581  Z-score: 1489.2  bits: 284.5 E(85289): 3.3e-76
Smith-Waterman score: 2581; 100.0% identity (100.0% similar) in 402 aa overlap (12-413:1-402)

               10        20        30        40        50        60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
                  :::::::::::::::::::::::::::::::::::::::::::::::::
XP_016            MMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
      50        60        70        80        90       100         

              130       140       150       160       170       180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
     110       120       130       140       150       160         

              190       200       210       220       230       240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
     170       180       190       200       210       220         

              250       260       270       280       290       300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
     230       240       250       260       270       280         

              310       320       330       340       350       360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
     290       300       310       320       330       340         

              370       380       390       400       410   
pF1KB6 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
     350       360       370       380       390       400  

>>NP_001317383 (OMIM: 616787) clusterin-associated prote  (432 aa)
 initn: 2399 init1: 2329 opt: 2330  Z-score: 1346.5  bits: 258.2 E(85289): 2.9e-68
Smith-Waterman score: 2606; 95.6% identity (95.6% similar) in 432 aa overlap (1-413:1-432)

               10        20        30        40        50        60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
              310       320       330       340       350       360

                                 370       380       390       400 
pF1KB6 SDDN-------------------EDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
       ::::                   :::::::::::::::::::::::::::::::::::::
NP_001 SDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
              370       380       390       400       410       420

             410   
pF1KB6 KSEPLDESDNDF
       ::::::::::::
NP_001 KSEPLDESDNDF
              430  

>>XP_016878557 (OMIM: 616787) PREDICTED: clusterin-assoc  (459 aa)
 initn: 2345 init1: 2275 opt: 2282  Z-score: 1319.0  bits: 253.2 E(85289): 1e-66
Smith-Waterman score: 2558; 95.1% identity (95.3% similar) in 427 aa overlap (6-413:33-459)

                                        10        20        30     
pF1KB6                          MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLV
                                     : .:::::::::::::::::::::::::::
XP_016 RGQNPGGSPWSLWLGSGHIKQTALANWRVLLSDFTEMMRALGYPRHISMENFRTPNFGLV
             10        20        30        40        50        60  

          40        50        60        70        80        90     
pF1KB6 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
             70        80        90       100       110       120  

         100       110       120       130       140       150     
pF1KB6 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
            130       140       150       160       170       180  

         160       170       180       190       200       210     
pF1KB6 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
            190       200       210       220       230       240  

         220       230       240       250       260       270     
pF1KB6 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
            250       260       270       280       290       300  

         280       290       300       310       320       330     
pF1KB6 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
            310       320       330       340       350       360  

         340       350       360                          370      
pF1KB6 PQTAMEMLMQGRPGKRIVGTMQGGDSDDN-------------------EDSEESEIDMED
       :::::::::::::::::::::::::::::                   ::::::::::::
XP_016 PQTAMEMLMQGRPGKRIVGTMQGGDSDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMED
            370       380       390       400       410       420  

        380       390       400       410   
pF1KB6 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
       :::::::::::::::::::::::::::::::::::::
XP_016 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
            430       440       450         

>>XP_016878560 (OMIM: 616787) PREDICTED: clusterin-assoc  (421 aa)
 initn: 2326 init1: 2256 opt: 2257  Z-score: 1305.3  bits: 250.5 E(85289): 5.8e-66
Smith-Waterman score: 2533; 95.5% identity (95.5% similar) in 421 aa overlap (12-413:1-421)

               10        20        30        40        50        60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
                  :::::::::::::::::::::::::::::::::::::::::::::::::
XP_016            MMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
      50        60        70        80        90       100         

              130       140       150       160       170       180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
     110       120       130       140       150       160         

              190       200       210       220       230       240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
     170       180       190       200       210       220         

              250       260       270       280       290       300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
     230       240       250       260       270       280         

              310       320       330       340       350       360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
     290       300       310       320       330       340         

                                 370       380       390       400 
pF1KB6 SDDN-------------------EDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
       ::::                   :::::::::::::::::::::::::::::::::::::
XP_016 SDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
     350       360       370       380       390       400         

             410   
pF1KB6 KSEPLDESDNDF
       ::::::::::::
XP_016 KSEPLDESDNDF
     410       420 

>>XP_006720930 (OMIM: 616787) PREDICTED: clusterin-assoc  (341 aa)
 initn: 2165 init1: 2165 opt: 2165  Z-score: 1254.2  bits: 240.8 E(85289): 4e-63
Smith-Waterman score: 2165; 100.0% identity (100.0% similar) in 341 aa overlap (73-413:1-341)

             50        60        70        80        90       100  
pF1KB6 VKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITS
                                     ::::::::::::::::::::::::::::::
XP_006                               MATKAHIKLNTKKLYQADGYAVKELLKITS
                                             10        20        30

            110       120       130       140       150       160  
pF1KB6 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
               40        50        60        70        80        90

            170       180       190       200       210       220  
pF1KB6 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
              100       110       120       130       140       150

            230       240       250       260       270       280  
pF1KB6 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
              160       170       180       190       200       210

            290       300       310       320       330       340  
pF1KB6 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
              220       230       240       250       260       270

            350       360       370       380       390       400  
pF1KB6 LMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRK
              280       290       300       310       320       330

            410   
pF1KB6 SEPLDESDNDF
       :::::::::::
XP_006 SEPLDESDNDF
              340 

>>XP_016878562 (OMIM: 616787) PREDICTED: clusterin-assoc  (360 aa)
 initn: 1910 init1: 1840 opt: 1841  Z-score: 1070.3  bits: 206.8 E(85289): 7.1e-53
Smith-Waterman score: 2117; 94.7% identity (94.7% similar) in 360 aa overlap (73-413:1-360)

             50        60        70        80        90       100  
pF1KB6 VKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITS
                                     ::::::::::::::::::::::::::::::
XP_016                               MATKAHIKLNTKKLYQADGYAVKELLKITS
                                             10        20        30

            110       120       130       140       150       160  
pF1KB6 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
               40        50        60        70        80        90

            170       180       190       200       210       220  
pF1KB6 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
              100       110       120       130       140       150

            230       240       250       260       270       280  
pF1KB6 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
              160       170       180       190       200       210

            290       300       310       320       330       340  
pF1KB6 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
              220       230       240       250       260       270

            350       360                          370       380   
pF1KB6 LMQGRPGKRIVGTMQGGDSDDN-------------------EDSEESEIDMEDDDDEDDD
       ::::::::::::::::::::::                   :::::::::::::::::::
XP_016 LMQGRPGKRIVGTMQGGDSDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMEDDDDEDDD
              280       290       300       310       320       330

           390       400       410   
pF1KB6 LEDESISLSPTKPNRRVRKSEPLDESDNDF
       ::::::::::::::::::::::::::::::
XP_016 LEDESISLSPTKPNRRVRKSEPLDESDNDF
              340       350       360

>>NP_079069 (OMIM: 616787) clusterin-associated protein   (247 aa)
 initn: 1595 init1: 1595 opt: 1595  Z-score: 932.8  bits: 180.8 E(85289): 3.2e-45
Smith-Waterman score: 1595; 100.0% identity (100.0% similar) in 247 aa overlap (167-413:1-247)

        140       150       160       170       180       190      
pF1KB6 LKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQV
                                     ::::::::::::::::::::::::::::::
NP_079                               MRTEAIARPLEINETEKVMRIAIKEILTQV
                                             10        20        30

        200       210       220       230       240       250      
pF1KB6 QKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 QKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQY
               40        50        60        70        80        90

        260       270       280       290       300       310      
pF1KB6 DTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDI
              100       110       120       130       140       150

        320       330       340       350       360       370      
pF1KB6 DIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMED
              160       170       180       190       200       210

        380       390       400       410   
pF1KB6 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
       :::::::::::::::::::::::::::::::::::::
NP_079 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
              220       230       240       




413 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:09:21 2016 done: Sat Nov  5 11:09:22 2016
 Total Scan time:  7.260 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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