GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:45:46

Sequence gi568815590f:55841860_56110107 : 268248 bp : 43.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  18127  18162   36  2  0  137   80    12 0.097   3.53
 1.02 Intr +  21362  21413   52  0  1   78   86    31 0.066  -0.13
 1.03 Intr +  37250  37374  125  2  2   33   81    79 0.128   1.93
 1.04 Term +  37768  37943  176  2  2   91   37   146 0.102   7.72
 1.05 PlyA +  39416  39421    6                               1.05

 2.00 Prom +  65270  65309   40                              -3.26
 2.01 Init +  79710  79738   29  2  2   94   94    15 0.487   1.77
 2.02 Intr +  80017  80150  134  1  2  107   56    56 0.296   4.59
 2.03 Intr +  99996 100132  137  1  2   82  100    65 0.211   7.39
 2.04 Intr + 104589 104634   46  2  1   63   95   -12 0.425  -5.02
 2.05 Intr + 105759 105864  106  1  1   77   83   199 0.652  17.57
 2.06 Intr + 108600 108698   99  0  0   83   70    69 0.932   3.83
 2.07 Intr + 108822 108925  104  0  2   40   97    37 0.969  -0.38
 2.08 Intr + 110107 110256  150  2  0  108  106    91 0.971  13.03
 2.09 Intr + 111973 112125  153  2  0   67  106    70 0.932   6.74
 2.10 Intr + 124856 125038  183  0  0  113   96   316 0.999  34.66
 2.11 Intr + 127858 127934   77  2  2  119   92    82 0.899  10.93
 2.12 Intr + 149790 149972  183  2  0  109   75    61 0.540   6.88
 2.13 Intr + 156487 156640  154  0  1   60   95   184 0.511  15.95
 2.14 Intr + 157559 157690  132  0  0   70   80    90 0.973   7.02
 2.15 Term + 168049 168251  203  2  2  112   43   249 0.999  20.35
 2.16 PlyA + 171815 171820    6                               1.05

 3.02 PlyA - 171973 171968    6                               1.05
 3.01 Sngl - 209348 208179 1170  2  0   97   28   709 0.999  61.88
 3.00 Prom - 216870 216831   40                              -1.26

 4.00 Prom + 217655 217694   40                              -7.16
 4.01 Init + 218208 218394  187  2  1   98  115    45 0.974   7.42
 4.02 Term + 219513 219649  137  1  2   66   37    94 0.983   0.28
 4.03 PlyA + 219702 219707    6                               1.05

 5.05 PlyA - 221923 221918    6                               1.05
 5.04 Term - 231413 231231  183  2  0   91   41   145 0.967   7.64
 5.03 Intr - 231909 231836   74  1  2   58   98    14 0.811  -1.47
 5.02 Intr - 232300 232201  100  1  1   38   56   169 0.830   8.38
 5.01 Init - 252054 251959   96  0  0   83   63    50 0.301   2.31
 5.00 Prom - 253534 253495   40                              -4.46

 6.03 PlyA - 254607 254602    6                               1.05
 6.02 Term - 259782 259376  407  1  2    7   43   493 0.902  32.05
 6.01 Init - 261179 261089   91  2  1   70   45    63 0.512   0.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:55841860_56110107|GENSCAN_predicted_peptide_1|129_aa
XHPQASGSFIYHELFGNKCTLKGKRLFELSKHWLGTSCYVQALPYMLGRSCSRNEITPAF
LHAGSAGPVQKGEGWPGLLHSPELQTESPGFCAFKALRDGHTKHPNLGQGPNGHFPALRA
QYANPSTRK

>gi568815590f:55841860_56110107|GENSCAN_predicted_CDS_1|390_bp
ngacatcctcaggccagcggcagctttatttaccatgagttgtttggcaataaatgtaca
ctgaaaggaaaaagattgtttgagctaagcaaacactggttaggcaccagctgctacgtg
caagcactgccctacatgctgggacgcagctgtagtaggaatgaaataacgccagcattc
ctgcatgcgggcagtgcgggccctgtacagaaaggagaaggctggcccgggctgctccac
tccccggagctgcagactgagtcgccaggtttctgtgccttcaaagccctgcgcgacggc
cacaccaaacacccaaaccttgggcagggaccaaacggtcacttccccgccctccgggct
caatatgcaaatccgagcaccaggaagtag

>gi568815590f:55841860_56110107|GENSCAN_predicted_peptide_2|629_aa
MGFELRLEDRYLQSIYKCRTMFLALIIQGCAKLTGIPALMELTVTEERWTDDKIGNMGCI
KSKGKDSLSDDGVDLKTQPVRNTERTIYVRDPTSNKQQRPVPESQLLPGQRFQTKDPEEQ
GDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLLTKKEGFIPSNYVAKLNTL
ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYK
IRSLDNGGYYISPRITFPCISDMIKHYQKQADGLCRRLEKACISPKPQKPWDKDAWEIPR
ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR
LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQDSSGLSMVFFVISF
RHRRFQETITLLHTQSFGHGAPPHAPLSLCSVNRFLKTKMKNTETAQIAEGMAYIERKNY
IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK
SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEK
AEERPTFDYLQSVLDDFYTATEGQYQQQP

>gi568815590f:55841860_56110107|GENSCAN_predicted_CDS_2|1890_bp
atgggttttgagttacgtttggaagacagatatttacagagcatttacaagtgccgaaca
atgtttcttgcactgataatacaagggtgtgcaaaactgacaggaatccctgctctcatg
gagcttacagtaacagaggagcgatggacagatgataaaataggaaatatgggatgtata
aaatcaaaagggaaagacagcttgagtgacgatggagtagatttgaagactcaaccagta
cgtaatactgaaagaactatttatgtgagagatccaacgtccaataaacagcaaaggcca
gttccagaatctcagcttttacctggacagaggtttcaaactaaagatccagaggaacaa
ggagacattgtggtagccttgtacccctatgatggcatccacccggacgacttgtctttc
aagaaaggagagaagatgaaagtcctggaggagcatggagaatggtggaaagcaaagtcc
cttttaacaaaaaaagaaggcttcatccccagcaactatgtggccaaactcaacacctta
gaaacagaagagtggtttttcaaggatataaccaggaaggacgcagaaaggcagcttttg
gcaccaggaaatagcgctggagctttccttattagagaaagtgaaacattaaaaggaagc
ttctctctgtctgtcagagactttgaccctgtgcatggtgatgttattaagcactacaaa
attagaagtctggataatgggggctattacatctctccacgaatcacttttccctgtatc
agcgacatgattaaacattaccaaaagcaggcagatggcttgtgcagaagattggagaag
gcttgtattagtcccaagccacagaagccatgggataaagatgcctgggagatcccccgg
gagtccatcaagttggtgaaaaggcttggcgctgggcagtttggggaagtctggatgggt
tactataacaacagtaccaaggtggctgtgaaaaccctgaagccaggaactatgtctgtg
caagccttcctggaagaagccaacctcatgaagaccctgcagcatgacaagctcgtgagg
ctctacgctgtggtcaccagggaggagcccatttacatcatcaccgagtacatggccaag
ggcagtttgctggatttcctgaagagcgatgaaggtggcaaagtgctgcttccaaagctc
attgacttttctgctcaggacagcagtgggctcagcatggtcttctttgtcatcagcttc
aggcacaggcgttttcaggaaacaatcaccttgctccacactcagagttttggtcatggt
gcacccccacatgctcccttgtccctgtgctcagtaaaccgctttttaaaaacgaaaatg
aaaaacacagaaacagcacagattgcagagggaatggcatacatcgagcggaagaactac
attcaccgggacctgcgagcagctaatgttctggtctccgagtcactcatgtgcaaaatt
gcagattttggccttgctagagtaattgaagataatgagtacacagcaagggaaggtgct
aagttccctattaagtggacggctccagaagcaatcaactttggatgtttcactattaag
tctgatgtgtggtcctttggaatcctcctatacgaaattgtcacctatgggaaaattccc
tacccagggagaactaatgccgacgtgatgaccgccctgtcccagggctacaggatgccc
cgtgtggagaactgcccagatgagctctatgacattatgaaaatgtgctggaaagaaaag
gcagaagagagaccaacgtttgactacttacagagcgtcctggatgatttctacacagcc
acggaagggcaataccagcagcagccttag

>gi568815590f:55841860_56110107|GENSCAN_predicted_peptide_3|389_aa
MADPRDKALRDYRKKVLEHKEIDGRLKELREQLKELTKQYEKSENDLKALRSVGQIVGEV
FKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLIY
NMSHEDPENVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAIASQLDCNFLKVVSSSIVDKYIGESAHLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLTELLNQMDGFDTLHRVKMIMATNRPDTLDPALLCPGRLDRKIH
IDLPNEQTRLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD
FVVQEDFMKAVRKVADSKKLEAKLDYKPV

>gi568815590f:55841860_56110107|GENSCAN_predicted_CDS_3|1170_bp
atggcggaccctagagataaggcgcttagggactaccgcaagaaggtgcttgagcacaag
gagatcgatggccgtcttaaggagttaagggaacaattaaaagaacttaccaagcagtat
gaaaagtctgaaaatgatctgaaggccctacgaagtgttgggcagattgtgggtgaagtg
tttaaacagttaactgaagaaaaattcattgttaaagctaccaatggaccaagatatgtt
gtgggttgtcgtcgacagcttgacaaaagtaagctgaagccaggaacaagagttgctttg
gatatgactacactaactatcatgagatatttgccaagagaggtggatccactgatttat
aacatgtctcatgaggaccctgagaatgtttcttattctgagattggagggctatcagaa
cagatccgggaattaagagaggtgatagaattacctcttacaaacccagagttatttcag
cgtgtaggaataatacctccaaaaggctgtttgttatatggaccaccaggtacgggaaaa
acactcttggcacgagccattgctagccagctggactgcaatttcttaaaggttgtatct
agttctattgtagacaagtacattggtgaaagtgctcatttgatcagagaaatgtttaat
tatgctagagatcatcaaccatgcatcatttttatggatgaaatagatgctattggtggt
cgtcggttttctgagggtacttcagctgacagagagattcagagaacgttaacggagtta
ctgaatcaaatggatggatttgatactctgcatagagttaaaatgatcatggctacaaac
agaccagatacactggatcctgctttgctgtgtccaggaagattagatagaaaaatacat
attgatttgccaaatgaacaaacaagattagacatactgaaaatccatgcaggtcccatt
acaaagcatggtgaaatagattatgaagcaattgtgaagctttcagatggctttaatgga
gcagacctgagaaatgtttgtactgaagcaggtatgttcgcaattcgtgctgatcatgat
tttgtagtacaggaagacttcatgaaagcagtcagaaaagtggctgattctaagaagctg
gaggctaaattggactacaaacctgtgtaa

>gi568815590f:55841860_56110107|GENSCAN_predicted_peptide_4|107_aa
MEWKKTHNSQLLPAKGKRRVKHEPNILAFWGPSNRLLSALLDSVNSEQKTHSLDDRLGTT
EKATQKQTNTMAQSNEQNKSSATNSKEVENYELTDKQLKIIIIEKLN

>gi568815590f:55841860_56110107|GENSCAN_predicted_CDS_4|324_bp
atggagtggaagaaaactcacaactcccagcttctccctgccaagggaaaaagaagagtg
aaacatgagcccaacatcctggctttctgggggccgtccaacagactactttctgccttg
cttgactcagtgaactcagagcagaagacgcatagtttggatgataggttggggaccact
gaaaaagcaacacagaaacagaccaacacaatggcccaatcaaatgaacaaaataaatct
tcagcaaccaactctaaagaagtagagaactatgaattaactgataaacaattaaaaata
atcattatagagaagctcaattag

>gi568815590f:55841860_56110107|GENSCAN_predicted_peptide_5|150_aa
MTSGESGALCEQLKRKRRQGALLAQGWAAPGKAFKDTGKTPVEPEVAIHRIRITLTSRNV
KSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLI
DLHSPSEIVKQITSISIEPGVEVEVTIADA

>gi568815590f:55841860_56110107|GENSCAN_predicted_CDS_5|453_bp
atgaccagcggagagagtggagcattgtgtgaacaattaaaacgaaaaaggcgccagggg
gcgctgctggctcaaggctgggcagcccccgggaaggcttttaaggataccggaaaaaca
cccgtggagccggaggtggcaattcaccgaattcgaatcaccctaacaagccgcaacgta
aaatccttggaaaaggtgtgtgctgacttgataagaggcgcaaaagaaaagaatctcaaa
gtgaaaggaccagttcgaatgcctaccaagactttgagaatcactacaagaaaaactcct
tgtggtgaaggttctaagacgtgggatcgtttccagatgagaattcacaagcgactcatt
gacttgcacagtccttctgagattgttaagcagattacttccatcagtattgagccagga
gttgaggtggaagtcaccattgcagatgcttaa

>gi568815590f:55841860_56110107|GENSCAN_predicted_peptide_6|165_aa
MVLNHSQRIHPYDSITSNQALPPTLGITIEWPVHISGQHLVAVVEDAESEDEEEEDVKLL
SISGKRSATGGGSKVPQKKVKLAADEDDDDDDDNDDDEDDDDFDDEGTEEKAPVKQSIQD
TLAKKGQKLNQNGKDSKPSLTPRSKGQDSFKKQEKLLKHQKDLVL

>gi568815590f:55841860_56110107|GENSCAN_predicted_CDS_6|498_bp
atggtgctaaatcattcacagaggatccacccctatgattcaatcacctccaaccaggcc
ctgcctccaactctgggaattacaattgaatggccagtgcatattagtggacagcactta
gtagctgtggtagaagatgcagagtcagaagatgaagaggaggaggatgtgaaactctta
agtatatctggaaagcggtctgctactggaggtggtagcaaggttccacagaaaaaagta
aaacttgctgctgatgaagatgatgatgatgatgatgataatgatgatgatgaagatgat
gatgattttgatgatgagggaactgaagagaaagcaccagtgaagcaatctatacaagac
actctagccaaaaaaggacaaaaattaaatcagaatggaaaagactcaaaaccatcatta
acaccaagatcaaaaggacaagactccttcaaaaaacaggaaaaactcctaaaacaccaa
aaggacctagttctgtag