GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:24:53

Sequence gi568815582f:19073428_19367073 : 293646 bp : 45.40% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    494    608  115  1  1   86   79    78 0.331   6.72
 1.02 Intr +   2294   2493  200  0  2   21   86   232 0.331  15.37
 1.03 Intr +   3879   3947   69  2  0   60   50    99 0.798   2.68
 1.04 Term +   5560   5646   87  0  0   83   42    61 0.593  -1.34
 1.05 PlyA +   5810   5815    6                               1.05

 2.00 Prom +  20633  20672   40                              -1.46
 2.01 Init +  41035  42631 1597  0  1   79   61  1747 0.121 163.70
 2.02 Term +  51513  51634  122  1  2  130   38    50 0.364   2.84
 2.03 PlyA +  52878  52883    6                               1.05

 3.00 Prom +  89735  89774   40                              -3.16
 3.01 Init +  95220  95234   15  2  0  100   91    30 0.526   4.82
 3.02 Intr + 100017 100096   80  2  2   64   61    92 0.375   2.45
 3.03 Intr + 106964 107112  149  2  2  105   91   157 0.985  17.58
 3.04 Intr + 110101 110720  620  2  2   70  110  1023 0.853  94.74
 3.05 Intr + 120899 121095  197  1  2   78   42   107 0.449   3.31
 3.06 Intr + 131517 131592   76  0  1   41   42    85 0.001  -1.28
 3.07 Intr + 141170 141284  115  1  1   71   16   105 0.039   1.62
 3.08 Intr + 144275 144408  134  0  2   71    6   105 0.019   0.96
 3.09 Intr + 149618 149738  121  1  1   92   86    54 0.949   5.67
 3.10 Intr + 151256 151411  156  0  0   72   96   183 0.991  17.48
 3.11 Intr + 154831 154917   87  2  0   65   95    25 0.250   0.84
 3.12 Intr + 162170 162282  113  0  2   -9   70   112 0.022  -0.20
 3.13 Term + 162710 162781   72  1  0  127   42    16 0.462  -1.19
 3.14 PlyA + 164282 164287    6                               1.05

 4.03 PlyA - 165190 165185    6                               1.05
 4.02 Term - 167419 167045  375  1  0  108   38   172 0.825   8.94
 4.01 Init - 168546 168448   99  0  0   76   32    91 0.427   2.57
 4.00 Prom - 175536 175497   40                              -3.26

 5.00 Prom + 185969 186008   40                              -4.16
 5.01 Init + 193117 193201   85  0  1   74   94    -3 0.525   0.00
 5.02 Term + 193453 193649  197  2  2   86   55   254 0.969  19.47
 5.03 PlyA + 193681 193686    6                              -0.45

 6.03 PlyA - 194876 194871    6                               1.05
 6.02 Term - 201764 201302  463  1  1   35   39   257 0.460  10.03
 6.01 Init - 206936 206803  134  2  2   39   92    47 0.103  -0.06
 6.00 Prom - 209940 209901   40                              -6.06

 7.00 Prom + 210357 210396   40                              -3.06
 7.01 Init + 212425 212512   88  0  1   53  111    60 0.511   3.80
 7.02 Intr + 225246 225411  166  1  1  102  111    51 0.933   7.82
 7.03 Intr + 230635 230728   94  1  1   64   94    46 0.911   2.77
 7.04 Intr + 234118 234233  116  0  2   33   47   210 0.230  10.65
 7.05 Intr + 255568 255615   48  1  0   89   96    40 0.027   2.70
 7.06 Intr + 271064 271169  106  2  1  102   98    36 0.509   6.22
 7.07 Term + 280635 280691   57  2  0  100   48    36 0.228  -1.51
 7.08 PlyA + 282004 282009    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  41035  42642 1608  0  0   79   40  1756 0.870 165.26
S.002 Term - 138842 138658  185  0  2   29   55   150 0.820   3.51
S.003 Init - 140608 140527   82  1  1   61  100    38 0.825   3.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_1|156_aa
KMWDQEKDHLKKFNELMVTFRVRPTVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEES
IAHHYNNQIRTLMEEDPEKYEELLQVFIRALERGCSRRKMADSNWLIKKFRDEELEHHDI
GLDHDAELNSYDEIFTLKLIEGGALGKCEVMRVEPS

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_1|471_bp
aaaatgtgggatcaagaaaaggaccatttgaaaaagttcaatgagttgatggttacgttc
agggtccggccaacagttctgatgcccttgtggaacgtgctggggtttgcactgggggcg
gggaccgccttgctcgggaaggaaggtgccatggcctgcaccgtggcggtggaagagagc
atagcacatcactacaacaaccagatcaggacgctgatggaggaggaccctgaaaaatac
gaggaacttcttcaggtatttatccgtgctctagaacggggctgctcaaggaggaaaatg
gcagatagcaattggctgataaagaaatttcgggatgaagagcttgagcaccatgacata
ggcctcgaccatgatgcagaattgaattcatacgatgaaatcttcactctcaagttgata
gaaggtggggcccttgggaagtgtgaggtcatgagagtggagccctcatga

>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_2|572_aa
MSVHYTLNLRVFWPLVTGLCTALVCLYHVLRGSGGARAEPADGVDGGFPLLKVAVLLLLS
YVLLRCRHAVRQRFLPGSPRLEGHAAFSSRHFREPGLSILLESYYEHEVRLSPHVLGHSK
AHVSRIVGELVRAGRARGSPGLIPGGALALAFRGDFIQVGSAYEQHKIRRPDSFDVLVPL
RLPPLVALEPRSLGEEPALAPAFRGCFLCALKAPPSPSGASGGHWLRDCKPFADAFCVDV
RGRRHLSATLVLRWFQSHLQRSLATVRYSLEGRCRVTLTPGGLEQPPTLHILPCRTDYGC
CRLSMAVRLIPAVHLGDGVFLVAPPPPPLPSAPLLELPEGLRAEALWGVNTARQEQKLLS
WLQERAAPGACYLKCLQLLKALRDLGARGLDSAAATQWGRILSSYVLKTVLLAVLLRKGA
PGQGWDEEHLGRCLEELVQFLRDCLLRRHTLFHCVLGPGGAAAEVGPLPKALREAAPVDL
LAAFDGHARELAAARLLSTWQRLPQLLRAYGGPRYLARCPPPRSQRTQGFLEGSVSLSST
PDHLSATQFLFISFLDVQGIFHYEKVLFGILW

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_2|1719_bp
atgtcggtgcactacaccctcaatctacgcgtcttctggcccctggtgaccggcctgtgc
accgccctggtgtgcctctaccatgtcctgcggggaagcgggggcgcccgggccgagccc
gccgacggcgtggatggcggcttcccgttgcttaaggtggccgtcctgctcctcctcagc
tatgtcctcctgcgctgtcgccacgctgtccggcagcgcttcctgcccgggtctccccgt
ctggagggtcacgccgccttctcctcgagacacttccgagagccgggcctcagcatcctg
ctggagagttactacgagcatgaggtgcgcctgtctccgcacgtgttgggccacagcaag
gcgcacgtgagccggatcgtgggcgagctggtgcgggctggccgcgcccgggggtccccc
ggtctcattcctgggggagcgctggccttggccttccgcggagacttcatccaggtgggc
agcgcctacgagcaacataaaatccgccggcccgacagcttcgacgtgctggtgccactg
cgcctcccgccgcttgtggcgctggagccacggagcctgggcgaggagccagcgctggcc
ccggccttccgcggctgcttcttgtgcgccctcaaggcaccaccctcaccatcgggggcc
tcggggggccactggcttcgggactgcaaaccctttgctgatgccttctgcgtggatgtg
cgcgggcggcgtcacctctctgctactctggtgctgcgctggttccagtcgcatctgcag
cgctccttggccactgtgcgttacagcctggaggggcgctgtcgggtcaccttgacccca
ggtggcctggaacagccccccaccttacacatcttgccctgccgcactgactacggctgc
tgccgcctttctatggctgtgcgtctcatccccgctgtccatctgggagatggggtcttc
cttgtggcgccaccaccgccacccttgcccagcgcgcccctgttggagctccctgagggc
ctgcgtgcggaggcactgtggggtgtgaacacagcacgccaggagcagaagctgctgagt
tggctgcaggaacgggcagctccaggtgcctgctacctcaagtgcctgcagttgcttaag
gctctgcgcgatctgggggcccgtgggctggactcagcggccgccacccagtggggacgc
atcctatcctcatatgtgctcaagacagtgctgctggcagtgctgctgcgcaagggggcc
cctgggcaaggctgggacgaggagcacctgggaaggtgtttggaggagttggtgcagttc
cttagggactgcctgctgcgacgccatacgctcttccactgcgtcctgggccctggtggg
gcggctgccgaggtgggtcccctgcccaaggcactgagggaagccgccccagttgacctc
ctggccgctttcgacgggcacgcccgggaacttgcagcagcgcggttgctgtccacgtgg
caaaggctgccccagcttctccgggcctacgggggtccccgctaccttgccaggtgcccc
ccaccccggagtcagcgcacccagggcttccttgaagggtctgtttccctgtcgtccacc
cccgatcatctctctgctacccagtttttgttcatctccttccttgatgtccagggcatt
ttccactatgaaaaggttttattcgggatactatggtag

>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_3|644_aa
MAYIQNLWSAAVQMDLPALLSEVLRVQLLPVKMASRSSDKDGDSVHTASEVPLTPRTNSP
DGRRSSSDTSKSTYSLTRRISSLESRRPSSPLIDIKPIEFGVLSAKKEPIQPSVLRRTYN
PDDYFRKFEPHLYSLDSNSDDVDSLTDEEILSKYQLGMLHFSTQYDLLHNHLTVRVIEAR
DLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEA
QRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSSQILGVGRIVNAAE
PPLRLSQITERDVVSQMLLAPGYFSLVFTLGQGSVFWGQQETPSLSILLMYRKRSHSLHS
SANQASPINPFKPFYSYNQIVRADIYDAQVNDVIHTYNIFWGRDPECDGNSPFPPGLGIH
LGMELLGHTPTCLPKQLHQFSLPPAVYSVLVYHILANTAYDFNEVELGELLLSLNYLPSA
GRLNVDVIRAKQLLQTDVSQGSDPFVKIQLVHGLKLVKTKKTSFLRGTIDPFYNESFSFK
VPQEELENASLVFTGGNCQLGQWSADAVREVLYSPFTEDPLLSYANHKMAQMLELSDEDF
EATIITMLHEVRVNPLEKNDKKTLAIHEEAVWHHGQSQPELASV

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_3|1935_bp
atggcgtacatccagaatctctggtctgctgctgtgcagatggacctgccggcactgctg
tcagaagtgctacgagtccagctgttgccagtcaagatggccagccggagcagtgacaag
gatggtgactctgtccacacggccagcgaagtcccgctgaccccacggaccaattccccg
gatggaagacgctcgtcctcagacacatccaagtctacatacagcctgacgcggaggatt
tcgagtcttgagtcaagacgtcccagctctccactcatcgatattaaacccatcgagttt
ggcgttctcagcgccaagaaggagcccatccaaccttcggtgctcagacggacctataac
cccgacgactatttcaggaagttcgaaccccacctgtactccctcgactccaacagcgac
gatgtggactctctgacagacgaggagatcctgtccaagtaccagctgggcatgctgcac
ttcagcactcagtacgacctgctgcacaaccacctcaccgtgcgcgtgatcgaggccagg
gacctgccacctcccatctcccacgatggctcgcgccaggacatggcgcactccaacccc
tacgtcaagatctgtctcctgccagaccagaagaactcaaagcagaccggggtcaaacgc
aagacccagaagcccgtgtttgaggagcgctacaccttcgagatccccttcctggaggcc
cagaggaggaccctgctcctgaccgtggtggattttgataagttctcccgccactgtgtc
attgggaaagtttctgtgcctttgtgtgaagttgacctggtcaagggcgggcactggtgg
aaggcgctgattcccagttctcagatactgggagtagggaggattgtgaatgctgcagaa
ccacctctccgcctctcacaaatcacagagagagatgttgtgtcccagatgttgctggcc
cctgggtacttctccttggtcttcactttgggccagggcagcgtgttctggggtcaacag
gaaacaccctcactcagcatcctgctgatgtacaggaaaaggagccatagcctacactca
tcagcaaatcaggccagccccatcaaccccttcaaacccttctactcctacaaccagatt
gttagagccgacatttatgatgcccaagtgaacgatgttattcatacgtacaacatattc
tggggcagagaccctgagtgtgatggcaactctccttttcctccagggctgggtatacac
ctaggaatggaactgctgggtcatacaccaacctgtttaccaaagcagctgcaccagttt
tcattaccaccagcagtatacagcgttcttgtttaccacatcctggccaacactgcttat
gattttaatgaagtggagctgggggagctgcttctgtcactgaattatctcccaagtgct
ggcagactgaatgttgatgtcattcgagccaagcaacttcttcagacagatgtgagccaa
ggttcagacccctttgtgaaaatccagctggtgcatggactcaaacttgtgaaaaccaag
aagacgtccttcttaaggggcacaattgatcctttctacaatgaatccttcagcttcaaa
gttccccaagaagaactggaaaatgccagcctagtgtttacaggtggcaactgtcagctg
gggcagtggtcagctgatgctgtcagggaagtcctgtactctccattcacagaagacccg
cttctctcctatgccaaccacaagatggcccagatgttggaattatcagatgaagacttt
gaagcaactattataaccatgctccacgaagtaagggtgaaccctcttgaaaagaatgat
aagaaaacattagcaattcatgaggaagctgtgtggcaccatggtcaaagtcagccagag
ctggcttctgtgtga

>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_4|157_aa
MTPIDDSEGPSGAATAIALAVVVGGSCGERAVVTLGASKYDGEAEEGPRTAYHWPAGASR
HEQPERHEQPGMSSRRQTGFWAEEGWSLVKPRLQTREGLKPGDQAASPVDQSGNLWCFSL
GQPMAAHGPISIHFLPSEAHKNPGLSQTQGREQRDDG

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_4|474_bp
atgactcctattgatgatagtgaagggccatccggagcagccactgccattgctctggct
gtggtggtggggggcagttgcggggaacgggcagtggtgactttgggtgccagcaagtat
gacggggaggctgaggaggggccaaggacagcctaccactggcctgcaggtgcctctcgg
catgaacagcctgagcgccatgagcaacctggcatgagcagcaggagacagacaggcttc
tgggcagaagagggctggtccctggtgaagccccgccttcaaaccagggagggcctgaag
cctggggaccaggccgccagtcccgtggaccagagtggaaacctctggtgcttttccctg
ggccagcccatggctgcccatggaccaatcagcatacacttcctcccctctgaggcccat
aaaaaccctggactcagccagactcagggtagagaacagagagacgatgggtag

>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_5|93_aa
MPWDIRLRLHIAGGAAVWQKEQPMPRLRVFGHNMKSSNDFIGRIVIGQYSSGPSETNHWR
RMLNTHRTAVEQWHSLRSRAECDRVSPASLEVT

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_5|282_bp
atgccgtgggacatacgtttaaggctgcatattgcaggcggtgcagctgtctggcagaag
gaacagccaatgccaaggctgagagttttcggccacaacatgaagagcagcaatgacttc
atcgggaggatcgtcattggccagtactcttcaggcccctctgagaccaaccactggagg
cgcatgctcaacacgcaccgcacagccgtggagcagtggcatagcctgaggtcccgagct
gagtgtgaccgcgtgtctcctgcctccctggaggtgacctga

>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_6|198_aa
MHTISLEASKCALKQNLLSCMVIGLKVLKIKHKPSSSNWLTYNESHPIVAQWAHEQSGHG
GRDGGYTWIQQHGLPLTKADLATVATAESSISQQQNPALSTQYGIIPWGDQLTTLWQFDY
IGPLPSSKRQHFVLIGIDTDSEYGFAFLPRNASDKTTMHGLTECFVHHHGIPHNIASDQG
THFTPKEVWQWAHAHGIH

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_6|597_bp
atgcacacaattagcctggaagcttctaagtgtgccctgaagcagaatcttctctcctgt
atggtcatagggttgaaagtgctgaaaatcaaacacaagccctcatcctccaattggctg
acttacaatgaaagccaccccatcgttgcccaatgggctcatgaacaaagtggccatggt
ggcagggatggaggttatacatggattcagcaacatggacttccactcaccaaggctgac
ctggctacagtggccactgctgagtcctcaatcagccagcagcagaacccagcactgagc
acccaatatggcatcattccttggggtgatcagctaactaccttgtggcagtttgattat
attggaccacttccatcatcgaagaggcagcattttgtccttattggaatagacactgac
tctgaatatggatttgccttccttccacgcaatgcttctgacaaaactaccatgcatgga
cttacagaatgctttgtccaccatcatggtattccacacaacattgcttctgaccaagga
actcactttacacccaaagaagtgtggcagtgggctcatgctcatggaattcactga

>gi568815582f:19073428_19367073|GENSCAN_predicted_peptide_7|224_aa
MQRWTLWAAAFLTLHSAQAFPQTDISISPALPELPLPSLCPLFWMEFKGHCYRFFPLNKT
WAEADLYCSEFSVGRKSAKLASIHSWEENVFVYDLVNSCVPGIPADVWTGLHDHRQEGQF
EWTDGSSYDYSYWDGSQPDDGVHADPEEEDCVQIWPKRLSGLSPPSNRDHRASSGLFMHN
DNLLNTQQVHTSGILICYPEENGMKGVKSCCVAFGTEDTKASGV

>gi568815582f:19073428_19367073|GENSCAN_predicted_CDS_7|675_bp
atgcaaaggtggacactgtgggctgcagccttcctgaccctccactctgcacaggccttt
ccacaaacagacatcagtatcagtccagccctgccagagctgcccctgccttccctgtgc
cccctgttctggatggagttcaaaggccactgctatcgattcttccctctcaataagacc
tgggctgaggccgacctctactgttctgagttctctgtgggcaggaagtccgccaagctg
gcctccatccacagctgggaggagaatgtctttgtatatgacctcgtgaacagctgtgtt
cccggcatcccagctgacgtctggacaggccttcatgatcacagacaggaagggcagttt
gaatggactgatggctcatcctatgactacagctactgggatggcagccagccagatgat
ggcgtccacgcggacccagaagaagaggactgcgtgcagatatggcccaagcgactctct
ggcctcagccccccaagcaaccgggaccacagggcctcaagtggtctctttatgcacaac
gacaatctcctgaatacacaacaggtgcacacttctggaattttaatctgttatcctgag
gagaatggaatgaagggggttaagagctgctgtgtggcttttggaactgaggacaccaaa
gcctcaggtgtctga