GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:20:24

Sequence gi568815590r:17130723_17345152 : 214430 bp : 38.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10984  11124  141  0  0   45   48   109 0.016   2.23
 1.02 Intr +  19811  19867   57  1  0   23   81   124 0.094   3.36
 1.03 Term +  20026  20238  213  0  0   56   38   117 0.096  -0.25
 1.04 PlyA +  20349  20354    6                               1.05

 2.05 PlyA -  21225  21220    6                               1.05
 2.04 Term -  25337  25110  228  2  0   61   54   177 0.295   7.25
 2.03 Intr -  26448  26248  201  0  0  100   52   117 0.252   7.86
 2.02 Intr -  28154  28040  115  1  1   47   64    45 0.176  -2.47
 2.01 Init -  32675  32311  365  2  2   82   94    72 0.271   3.79
 2.00 Prom -  33198  33159   40                              -6.05

 3.00 Prom +  39172  39211   40                              -2.45
 3.01 Init +  39475  39529   55  0  1   17   84    42 0.035  -1.80
 3.02 Intr +  54067  54093   27  2  0  139  121    35 0.543   9.07
 3.03 Intr +  55609  55703   95  2  2  101  100    15 0.469   2.76
 3.04 Intr +  64782  64902  121  2  1   71   84   145 0.236  11.55
 3.05 Term +  67041  67093   53  1  2   88   54    20 0.031  -4.79
 3.06 PlyA +  67739  67744    6                               1.05

 4.03 PlyA -  67858  67853    6                               1.05
 4.02 Term -  69083  68703  381  2  0   27   42   559 0.328  39.05
 4.01 Init -  82344  82255   90  0  0   69  100    56 0.136   5.44
 4.00 Prom -  86847  86808   40                              -2.05

 5.04 PlyA -  87334  87329    6                               1.05
 5.03 Term - 100126  99998  129  1  0   82   44   130 0.954   5.20
 5.02 Intr - 104138 103994  145  1  1   78   78   173 0.967  14.66
 5.01 Init - 106644 106490  155  0  2   62   66   128 0.619   7.50
 5.00 Prom - 106796 106757   40                              -3.75

 6.00 Prom + 107917 107956   40                              -5.25
 6.01 Init + 111268 111459  192  0  0   77   72    66 0.269   2.91
 6.02 Intr + 115468 115680  213  0  0   91   78   218 0.512  19.09
 6.03 Intr + 115930 116051  122  0  2   76   16   116 0.372   1.57
 6.04 Intr + 116078 116225  148  2  1   19    8   174 0.263   1.82
 6.05 Intr + 116357 116686  330  1  0   50   39   264 0.215  12.60
 6.06 Intr + 130962 131249  288  2  0   29  105   142 0.280   6.52
 6.07 Intr + 137552 137650   99  1  0   85   48    73 0.501   2.39
 6.08 Intr + 138134 138234  101  1  2   40   83    73 0.558  -0.01
 6.09 Intr + 144011 144245  235  2  1  126   23   181 0.597  12.17
 6.10 Intr + 145675 145745   71  0  2   67   92    93 0.995   4.66
 6.11 Intr + 149306 149433  128  2  2  113   55   103 0.752   8.90
 6.12 Intr + 149517 149575   59  1  2   15  113    19 0.596  -5.22
 6.13 Intr + 149653 149721   69  0  0   75   94    56 0.615   3.36
 6.14 Intr + 153751 153894  144  0  0   80   45   124 0.518   6.86
 6.15 Term + 155625 155705   81  2  0   64   43    84 0.480  -1.79
 6.16 PlyA + 157950 157955    6                               1.05

 7.08 PlyA - 158487 158482    6                               1.05
 7.07 Term - 163187 162586  602  0  2   83   43   413 0.889  30.00
 7.06 Intr - 169502 169211  292  2  1   73   77   182 0.425  11.38
 7.05 Intr - 171558 171432  127  2  1   98   63   220 0.999  20.26
 7.04 Intr - 175235 175035  201  1  0   91  108    85 0.994   8.28
 7.03 Intr - 178604 178555   50  2  2   87  131    32 0.999   3.96
 7.02 Intr - 180914 180789  126  2  0  113  101   139 0.999  17.66
 7.01 Init - 182656 182570   87  1  0   59   91    63 0.561   4.39
 7.00 Prom - 183570 183531   40                              -7.65

 8.04 PlyA - 184688 184683    6                               1.05
 8.03 Term - 186684 186556  129  0  0   51   48   176 0.865   7.10
 8.02 Intr - 187672 187545  128  2  2   82   28   103 0.535   3.18
 8.01 Init - 194679 194553  127  0  1   48   51   118 0.003   4.47
 8.00 Prom - 195865 195826   40                              -7.45

 9.04 PlyA - 196561 196556    6                               1.05
 9.03 Term - 199736 199525  212  0  2   63   45   173 0.970   6.97
 9.02 Intr - 200560 200428  133  1  1   79   92   133 0.314  12.10
 9.01 Intr - 210775 210641  135  1  0   98  106   244 0.968  27.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_1|136_aa
ASEGMTAAGGLTSRTLTHMATPILCYMALSMGLLMTTGQLTSHGSSDEISELNQRPILPD
NDIDGEETEVYIDVIEVHPQGSSRAFRNYWVSLQSDIYIFWNMDSLVAENGFHSHSRHSE
KVVLYSLDSSSKEEIS

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_1|411_bp
gcatcagaaggaatgactgcagctggaggactgacttccagaacactcactcacatggcg
acccccatcctctgctacatggccctctcgatggggctgctcatgacaacagggcagcta
acttctcacggctcaagtgatgaaatttcagaactcaaccagagacctattcttccggat
aacgacattgatggagaagagactgaggtctacattgatgtgattgaagtccatccacag
ggttcctctagggcctttcgcaattactgggtatcccttcaaagtgatatctacattttc
tggaatatggacagtctggttgcagagaatggttttcattctcacagtagacacagcgaa
aaggtggttctttactctttggattcctcttcaaaggaagaaatttcctag

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_2|302_aa
MVTKKDQTPELAGPCSLRCGRNHLSPASWTLPRLEHWTRCYQAGGAVVVPVFCGDRLPGS
SSFQRLFLRCNVSSASLACPSFLSISKLSSPGSPWIQRVAFMPSFTHKVTGPGQSKSGPS
IGPLTVVFNVAGIAPGQADRHYARQTGIAPGRQGQEVIDKRSRGPSAPLGGVAEAAAVSG
RRREARRRVRGGGATLTRELGGEGEGRARGRSCPEAAFSGGAGGTRQPAWNPRASTCGSL
GARGGRKEPPFTTRAFGGSRNAQRRGGAEPASGMGGAVESEEEAFLAVNPGTSGVRNTSS
LL

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_2|909_bp
atggtaacgaaaaaagatcaaacacctgagctcgctggaccatgcagcctgagatgtggg
cgcaaccacctcagccctgccagctggacactgcccaggctggaacactggacccgctgt
taccaggctgggggagcagtggtggttccagtgttctgtggtgaccggctgccaggcagc
agctctttccaaaggctgttcctcaggtgcaacgtcagctccgcttcactcgcctgccct
tcgtttctgtccatttctaagctaagctctccaggctcgccgtggattcagagagttgca
ttcatgcccagtttcacccacaaggtcacaggccctggacagagtaaaagtggcccgagc
atcggaccacttactgttgttttcaatgtggcaggcattgcgccaggccaggcagacagg
cattacgccaggcagacaggcattgcgccaggcaggcagggacaagaagtgatagataag
cggtcccggggaccttccgcccctctagggggtgtggccgaggcggcggcggtgagcgga
aggcggcgggaggctcggcggcgagtgcggggcggaggcgccaccttaacccgagagttg
ggaggggagggcgaggggcgtgcgcgtggaagaagctgccccgaggctgcttttagcggc
ggagccggcgggacgcggcagcccgcgtggaaccctcgcgcttcaacttgcgggtccctg
ggagcccgcgggggccgcaaggagcctccctttactactcgggctttcgggggaagcaga
aatgcacagcgaagagggggtgccgagccggcgtctggcatgggaggggctgtggagagc
gaggaagaagcatttttggctgtgaatccaggcacctctggagttagaaacacaagttct
ttgctctga

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_3|116_aa
MTVKLQKKIVLLSDPILKVSMENTGEQVVCLMAYHLLFAMFVWSYWKTIFTLPMNPSKEF
HLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGALDLGNGVGITRWHSYQ

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_3|351_bp
atgacagtgaagttacagaagaaaatagtgcttctcagtgacccaatactgaaggtgtcc
atggaaaacactggcgaacaagttgtgtgcctgatggcctatcatctactttttgcaatg
tttgtctggtcatactggaaaactatctttacattaccaatgaatccttcaaaagaattc
catctctcttatgcagagaaagatttgttggagagagagccaagaggagaagcccatcag
gaagttcttaggcgagcagccaaggatcttcccatctataccaggaccatgtctggagcc
cttgatttaggaaatggagttggtataacccgctggcattcataccagtga

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_4|156_aa
MLGPCEEQQDLCLRIVSERKVKKNDIQKAKPGRQSETLSQKKKKRRRKKKDEEGKRRKKE
EERRKKEKEEKKKKKEGGGRREEEEEKKKKGRRRRRKNKEEERRRRRQRRRRRRRRQKTK
TEDEDEDEEEEEEEEEEEEEEEEVLLKTLGEREHLL

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_4|471_bp
atgcttggtccatgtgaggaacagcaagatctgtgtctgaggattgtaagtgaaaggaaa
gtaaaaaagaatgacatccagaaggccaagcctgggcgacagagcgagactctgtctcaa
aaaaaaaaaaaaagaagaagaaagaagaaggacgaagaaggaaaaagaagaaagaaggaa
gaagaaagaaggaagaaggagaaagaagaaaagaagaagaagaaggagggaggagggagg
agggaggaggaggaggagaagaagaagaaaggaagaagaagaagaagaaagaataaagaa
gaagaaagaagaagaagaagacaaagacgaagaagacgaagacgaagacagaagacgaag
acagaagacgaagacgaagacgaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagtcttattaaagacactgggggagagggaacacttgttgtaa

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_5|142_aa
MYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLI
KILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKMFFEDHIDDAKYCGHLYGLG
SGSSYVQNGTGNAYEEEANKQS

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_5|429_bp
atgtatgcccaggactctatagagctactaacaacatctggtatccagtttaaaaaacat
gaggaggaaggaattgaaacccagtactttgcagaacttcttatgacttctggagtggtc
ctctgtgaaggggtcaaatggttgtcatttcatagcggttacgactttggctacttaatc
aaaatcctaaccaactctaacttgcctgaagaagaacttgacttctttgagatccttcga
ttgttttttcctgtcatttatgatgtgaagtacctcatgaagagctgcaaaaatctcaaa
atgttctttgaagatcatattgatgatgccaaatattgtggtcatttgtatggccttggt
tctggttcatcctatgtacagaatggcacagggaatgcatatgaagaggaagccaacaag
cagtcatga

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_6|759_aa
MWEPTLVSMSFRGTVHSHRYTYSLTLGQLSHTISPNVHSLGMWEEIRGPGRKSTYTRERA
HSTQSQKPRRDTKGLLITGESISVLQFPRETRGRHRGIQAIDNSLPWQSASAKVLITLTG
ATLTPKHCRVKQYEEAAADARSTCVAELALLLLLLAIETALGGGGGGGGGSGGGSGEGKG
EQELRRTVLRRRFSHVLTGALDDDATRRGGGERPRGRGTQVTAARNSGSAGRTGLEKTRS
PALGPRTSHPAPLSLENRRAEPLGEAGQSLPGPPARGPEEDELAFSPDQERLLLRGWVPR
WPHQPPAAEAAPDRVPPELTLQVTGRCLSTGGKSRVCLGSNKYLEQCPSLMGELPKGISQ
QCGKAGKRFLPMVSVEYISYNMELLNRHSDLVFSLAADRAVSRVEDGSLASPLCLWLSSG
IFLPSVLMMLLFPQEKPVISVYPPIRHHLMDKQGVYVTSPLVNNFTMHSDLGKIIQSLLD
EFWKNPPVLAPTSTAFPYLYSNPSGMSPYASQGFPFLPPYPPQEANRSITSLSVADTVSS
STTSHTTAKPAAPSFGVLSNLPLPIPTVDASIPVGITSQNGFGYKMPDVPDAFPELSELS
VSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLEAKRQTVL
DKYELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFLEGKME
IDDFLSSFMEKRTICHCRRAKEEKLQQAIAMHSQFHAPL

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_6|2280_bp
atgtgggaaccaaccctggtcagcatgtcgttccgtggcacagtgcactcacacagatac
acctactcactcacactgggacaacttagccacaccatttcacctaacgtgcacagcctt
gggatgtgggaggaaatcagaggacccgggagaaaatccacatatacacgagaacgtgca
cactccactcagtcccagaagccccgaagagacaccaaaggccttctcattactggagaa
agcatctccgtactgcagtttcccagagaaacgagaggacggcaccgaggtattcaagcc
atagataactctcttccctggcaaagcgccagtgcgaaggtgctgataacactgactgga
gctacactgactcccaagcactgccgcgtgaaacaatacgaagaggctgcagcggatgca
agatctacttgtgtcgctgagctcgcgctcctcctcctcctcctcgccatagagacagca
ctcggcggcggtggcggtggcggtggcggtagcggcggcggcagcggcgaagggaaaggc
gagcaggagctgcgccgcaccgtgctgcgccgtcgcttttcgcacgtcctgacgggggcg
ctagatgatgacgcgacacgcagagggggcggagagcgcccccgggggcggggcacgcaa
gtgacggcggcgcggaactcggggagcgcaggcaggacaggcttagagaagacgcggtcc
ccagcgcttgggccacggacgtcccaccccgctcctctgtcgctggagaaccgccgggcc
gagccactgggagaagcaggccagagccttccagggcctccggcccgtggacccgaggag
gatgagctggctttttcccctgaccaagagcgcctcctcctccgcggctgggtcccccgg
tggcctcaccagcctccagcagcagaagcagcgcctgatcgagtccctccggaactcaca
ctccaggtgactggtcgctgcctctccaccggaggaaaaagtagggtttgccttggctct
aataagtacctggagcagtgcccatctctaatgggggagctcccaaaggggatatcccaa
cagtgtgggaaggctggcaaacggttcctgcccatggtttctgtggaatatatctcctac
aacatggagctgctgaataggcactctgatttggtgttttctttggctgcagacagggca
gtttccagggttgaggatggtagtcttgcctctcccctttgtctctggctgtcctcagga
atatttctcccttcagtcctcatgatgcttctgtttcctcaggaaaaaccagtgatcagt
gtttatccaccaatacgacatcacttaatggataaacaaggagtgtatgttacctctcca
ttagtaaacaattttacaatgcactcagatcttggaaaaattattcagagtctgttggat
gagttttggaagaatcctccagttttagctcctacttcaacagcatttccttatctatac
agtaacccaagtgggatgtctccttatgcttctcagggttttccatttcttcctccatat
cctccacaagaagcaaacaggagtatcacttctttatctgttgctgacactgtttcttct
tcaacaacaagtcataccacagccaagcctgccgctccttcatttggtgtcctttcaaat
ctgccattacccattcccacagtggatgcttcaataccggttggtatcacaagccaaaat
ggttttgggtacaagatgccagatgtccctgatgcatttccagaactctcagaactaagt
gtgtcacaactcacagatatgaatgaacaagaggaggtattactagaacagtttctgact
ttgcctcaactaaaacaaattattaccgacaaagatgacttagtaaaaagtattgaggaa
ctagcaagaaaaaatctccttttggagcccagcttggaagccaaaagacaaactgtttta
gataagtatgaattacttacacagatgaagtccactttcgaaaagaagatgcaaaggcag
catgaacttagtgagagctgtagtgcaagtgcccttcaggcaagattgaaagtagctgca
catgaagctgaggaagaatctgataatattgcagaagacttcttggagggaaagatggaa
atagatgattttctcagtagcttcatggaaaagagaacaatttgccactgtagaagagcc
aaggaagagaaacttcagcaggcgatagcaatgcacagccaatttcatgctccactatag

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_7|494_aa
MSDFLWGLENSGWLRHIKAIMDAGIFIAKAVSEEGASVLVHCSDGWDRTAQVCSVASLLL
DPHYRTLKGFMVLIEKDWISFGHKFNHRYGNLDGDPKEISPVIDQFIECVWQLMEQFPCA
FEFNERFLIHIQHHIYSCQFGNFLCNSQKERRELKFWSGMYNRFEKGMQPRQSVTDYLMA
VKEETQQLEEELEALEERLEKIQKVQLNCTKVKSKQSEPSKHSGFSTSDNSIANTPQDYS
GNMKSFPSRSPSQGDEDSALILTQDNLKSSDPDLSANSDQESGVEDLSCRSPSGGRHLPA
GVDRQLIQESSGWHFAGAPLGQSFQRKEQAAIFAVLQPPLVIPRQTGCGVDPQQTPADLQ
KRGLLERQLTESNSININKNDDHAKIPSEGHQQQRTKVDKSMKMRKNQCKKAENSKNQKA
SSPPKDHNSSPAREQNWTENEFDELTEVGFRRWVINSLELKEHVLTQCKEAKNLDKRLEE
LLTRIISLEKNINK

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_7|1485_bp
atgagtgatttcctgtggggtctggagaactctggctggttaaggcacattaaagccata
atggatgcaggaatcttcattgcaaaggcagtgtcagaggaaggggcaagtgtgcttgtt
cactgttctgatggctgggacaggaccgctcaggtgtgctcggtggcaagcctgctgctg
gaccctcactaccggactctgaagggcttcatggtattaattgaaaaggactggatttcc
tttggtcataagtttaatcaccgatatggcaatctagatggtgacccaaaagaaatctct
ccagttattgaccagttcattgagtgtgtttggcagttaatggaacaatttccctgtgcc
tttgagttcaatgagaggtttttgattcacattcaacatcacatttattcctgccagttt
ggaaacttcctatgtaacagccaaaaggagagacgagaactcaagttttggagtggaatg
tataaccgctttgaaaaggggatgcagccccgacagtcagttacagattacctaatggca
gtgaaggaagaaactcagcagctagaggaagaactagaggccctggaagaaaggctggaa
aaaattcaaaaggtccagttaaattgcactaaggtgaagagtaagcaaagtgagcccagc
aagcactcagggttttctacctcagacaacagcatagccaacactccccaggattacagt
gggaatatgaaatcatttccatcccggagcccttcacaaggcgatgaagattctgctctg
attctaacccaagacaatctgaaaagttcagatccagatctgtcagccaacagtgaccaa
gagtccggggtggaggatttgagctgtcggtctccaagtggtggcagacacctcccagca
ggggttgacagacagctcatacaggagagctctggctggcactttgcaggtgcccctctg
ggacaaagcttccagaggaaggagcaggcagcaatctttgctgttctgcagcctccgctg
gtgatacccaggcaaacaggatgtggagtagacccccagcaaactccagcagacctgcag
aagaggggcttgttagaaagacaactaacagaaagcaatagcatcaacatcaacaaaaat
gacgaccatgcaaaaattccatccgaaggtcaccaacaacaaagaacaaaggtagataaa
tccatgaagatgaggaaaaaccagtgcaaaaaggctgaaaattcaaaaaaccagaaagcc
tcttctcctccaaaggatcacaactcctcgccagcaagggaacaaaactggactgagaat
gagtttgatgaattgacagaagtaggcttcagaaggtgggtaataaactccttagagcta
aaggagcatgttctaactcaatgcaaggaagctaagaaccttgataaaaggttagaagaa
ttgctaactagaataatcagtttagagaagaacataaataaatga

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_8|127_aa
MIPDLFFHAKVLRPDGLKSSFGVERMVGGRALGVVVGGTIVVAIIMNAVHWCAVNLSSAQ
LFLWTPQNCGSAAPKQHLVYVCWVSDTGIQRDALRCSEDSMPGPTNIEDKGLADVTLAKS
PIAKLGS

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_8|384_bp
atgatacccgatctgttcttccacgcaaaggttttgaggcctgatggattgaaatcttca
ttcggtgtggaaaggatggttggaggcagagcacttggagttgtcgtgggaggcaccatc
gtggtggccattatcatgaacgctgttcactggtgtgctgtaaacttgtcttcagcccag
ctttttctgtggactccacagaactgtggaagcgctgctcctaagcagcatttggtgtac
gtctgctgggtgtctgacactggcatccaacgtgatgcactcaggtgttcagaagattcc
atgccggggcctacaaacatcgaagacaaaggactcgcagatgttacattggccaaatcc
cccatagcaaagcttggcagctaa

>gi568815590r:17130723_17345152|GENSCAN_predicted_peptide_9|159_aa
ASICRSSQPLSGFSARCLEDEQMLQAIRKANPGSDFVYVVDTRPKLNAMANRAAGKGYEN
EDNYSNIKFQFIGIENIHVMRNSLQKMLEVTPRGICRCSLPLPALRTGKRQRMQKPWPCA
LAVHALSALLGKALESWSWEPGKWAVLMGNAGSGMKRDK

>gi568815590r:17130723_17345152|GENSCAN_predicted_CDS_9|480_bp
gcctccatctgccggagcagccagcccctgtccggcttcagtgcccggtgcctagaggac
gagcagatgctccaggccattaggaaagccaatccaggaagtgacttcgtttatgtcgtt
gacacccggcctaaacttaatgcaatggcaaatcgtgctgcagggaaaggctatgagaat
gaagacaattattccaatatcaagtttcagtttatcgggatagagaacatccatgtcatg
aggaacagtctgcagaaaatgctggaagtgaccccaagaggaatctgtcgctgtagtcta
ccacttccggctctgcgaactgggaaaagacagaggatgcagaaaccatggccttgtgcc
ttggctgtccatgcactgtctgcgcttctggggaaagccctggagagctggagctgggag
cccgggaagtgggctgtcttgatgggaaatgcaggctctggaatgaagagggacaaataa