GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:17:59

Sequence gi568815595f:194036381_194238230 : 201850 bp : 46.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2744   2904  161  1  2   34   49   119 0.158   1.90
 1.02 Intr +   7386   7450   65  0  2   96   97    20 0.132   2.06
 1.03 Term +  15071  15237  167  0  2  105   38    66 0.146   1.38
 1.04 PlyA +  16416  16421    6                               1.05

 2.03 PlyA -  19237  19232    6                               1.05
 2.02 Term -  21767  21743   25  1  1  131   54    50 0.111   3.60
 2.01 Init -  27540  27407  134  0  2   73   58   116 0.103   6.72
 2.00 Prom -  43245  43206   40                              -3.66

 3.03 PlyA -  44387  44382    6                               1.05
 3.02 Term -  63236  63088  149  0  2   70   47   163 0.984   8.46
 3.01 Init -  65881  65707  175  1  1   54   72    86 0.400   3.11
 3.00 Prom -  70979  70940   40                              -5.66

 4.00 Prom +  71438  71477   40                              -4.16
 4.01 Init +  71581  71782  202  0  1   91   20   187 0.222  11.24
 4.02 Term +  79645  79700   56  2  2   99   41    74 0.450   1.52
 4.03 PlyA +  80051  80056    6                               1.05

 5.03 PlyA -  80421  80416    6                               1.05
 5.02 Term -  82727  82569  159  2  0  107   48   115 0.546   7.34
 5.01 Init -  92076  92041   36  0  0   84  105    38 0.178   3.28
 5.00 Prom -  94321  94282   40                              -7.36

 6.00 Prom +  96486  96525   40                              -4.66
 6.01 Init + 100001 100108  108  1  0   58  116   160 0.803  16.02
 6.02 Intr + 100237 100332   96  0  0   54   95    79 0.975   5.41
 6.03 Intr + 100581 100668   88  2  1   88   76   129 0.966  11.24
 6.04 Term + 101303 101853  551  0  2  121   55   756 0.998  70.06
 6.05 PlyA + 102206 102211    6                               1.05

 7.00 Prom + 114008 114047   40                              -5.26
 7.01 Sngl + 118028 118216  189  1  0   93   37   173 0.711   7.88
 7.02 PlyA + 118970 118975    6                               1.05

 8.08 PlyA - 121150 121145    6                               1.05
 8.07 Term - 130229 130149   81  2  0  101   48    35 0.055  -1.51
 8.06 Intr - 139303 139251   53  2  2  123   95    -8 0.175   2.03
 8.05 Intr - 140415 140283  133  0  1   25   30   150 0.252   3.12
 8.04 Intr - 141503 141371  133  1  1   93   44    88 0.271   5.55
 8.03 Intr - 188012 187890  123  1  0   14   60   119 0.162   1.40
 8.02 Intr - 188955 188871   85  1  1   73   76    78 0.839   3.98
 8.01 Init - 190663 190573   91  1  1   73   81    84 0.909   6.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_1|130_aa
MSDGSPERRADGHSIYNQQCPVQEEQRLCELVALPDISLSAFSCKNLGNQLCYRIQTLQS
KYNTEKSFSTQLSTFELAWELPMAIPTWPLLVTSLARRSLLPKGYSLREHENQCVNNGSM
HQETSPQLQP

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_1|393_bp
atgagtgacgggtcccctgagagaagagcggatggccacagcatctacaaccagcagtgc
ccagtgcaggaggaacagcggctttgcgagcttgtggctcttccagacatttccttatca
gctttctcctgcaagaatctgggcaatcaactgtgttacagaattcagactcttcagagc
aaatacaacaccgagaaatcattctccactcagctaagcacattcgaacttgcatgggaa
ttacccatggccattcccacatggccactcctggtcacatctctggccagaaggtctctc
ctccccaagggctacagcttaagggaacatgaaaatcagtgtgtgaacaatggcagcatg
caccaggaaaccagccctcagcttcagccctga

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_2|52_aa
MCKEQWGVRGTDVTFRVRVSQIIWEGHTYNRDPVKDEPETVLTGICYVVNRD

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_2|159_bp
atgtgcaaggagcagtggggagtcagagggacagatgtgacctttcgtgtcagggtgtcc
cagattatttgggaaggccacacctacaaccgtgacccagtcaaagacgagcctgaaaca
gtactgactgggatatgttatgtggtcaacagggactga

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_3|107_aa
MWCSANGQTTAVEMPLRAQRKGTLVHLGEATPFLSQPGEWELYLLKAIMMWSLCRVTVAL
RQRDVLMAANPKGAVPSDDATFSTRELFSFLAVAAAREESTGNVHQL

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_3|324_bp
atgtggtgctcagccaatgggcagacaacagcagtggagatgccactgagggcccagaga
aaaggcactttggtacatctgggagaggccactcccttcctgagccagccaggagagtgg
gagctgtacctcttgaaagccatcatgatgtggagtctctgccgggtcacagtggctctt
cggcagagggatgtgctgatggctgccaatccgaagggtgctgtaccatctgacgatgcc
accttctcaacacgggagctgttctctttcctggctgttgctgcggccagggaagagagc
acaggaaatgtgcaccaactctga

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_4|85_aa
MALDNPASTSVNYELLDSQISLTKSGNMANMKEKEDYGLIEGMLSNIVNGVLKDGLAEDI
KMASFCNSCCDYQAVRSLEVAAKRS

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_4|258_bp
atggctttagacaatccagcaagcaccagtgtgaactatgagcttcttgatagccaaata
tcactgacaaaaagtggaaatatggctaacatgaaagagaaagaagactatggcctgata
gaagggatgttgagtaacatagtgaatggggtcctcaaggatggcttagcagaagacatc
aagatggccagcttttgtaatagctgctgtgactatcaggctgttcggagtctggaagtg
gctgctaaacgctcgtga

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_5|64_aa
MNFIAKTLSHLLATTTPTPTSPLNTCCLGHGQQLGSASRVQPLEEGTTSNAAAASEALKH
KNQH

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_5|195_bp
atgaattttatagctaagacactgagccatctgctggcaaccaccaccccaacacccact
agccctctgaacacctgctgtctaggtcatggacagcaactaggctctgcttcacgtgtg
cagcccctggaggaaggtacaacctcaaatgccgctgcagcctcagaggcccttaaacac
aagaaccagcactga

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_6|280_aa
MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAP
FAPPPPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAH
SGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_6|843_bp
atgccagctgatataatggagaaaaattcctcgtccccggtggctgctaccccagccagt
gtcaacacgacaccggataaaccaaagacagcatctgagcacagaaagtcatcaaagcct
attatggagaaaagacgaagagcaagaataaatgaaagtctgagccagctgaaaacactg
attttggatgctctgaagaaagatagctcgcggcattccaagctggagaaggcggacatt
ctggaaatgacagtgaagcacctccggaacctgcagcgggcgcagatgacggctgcgctg
agcacagacccaagtgtgctggggaagtaccgagccggcttcagcgagtgcatgaacgag
gtgacccgcttcctgtccacgtgcgagggcgttaataccgaggtgcgcactcggctgctc
ggccacctggccaactgcatgacccagatcaatgccatgacctaccccgggcagccgcac
cccgccttgcaggcgccgccaccgcccccaccgggacccggcggcccccagcacgcgccg
ttcgcgccgccgccgccactcgtgcccatccccgggggcgcggcgccccctcccggcggc
gccccctgcaagctgggcagccaggctggagaggcggctaaggtgtttggaggcttccag
gtggtaccggctcccgatggccagtttgctttcctcattcccaacggggccttcgcgcac
agcggccctgtcatccccgtctacaccagcaacagcggcacctccgtgggccccaacgca
gtgtcaccttccagcggcccctcgcttacggcggactccatgtggaggccgtggcggaac
tga

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_7|62_aa
MADPSIMAEPSLPAITAKAPDMRKPSLVLQLVESQDDYSTANAMWSRRVAQLSPLSPQHD
ER

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_7|189_bp
atggctgatcccagcatcatggctgagcccagcctgccggccatcactgccaaggcacca
gacatgaggaagccatctttggtgttgcagctggtggagtcccaggatgactacagcaca
gccaatgccatgtggagcagaagagtcgcccagctgagcccactcagccctcagcatgat
gaaagataa

>gi568815595f:194036381_194238230|GENSCAN_predicted_peptide_8|232_aa
MDWVAYKQQKFITVLEAAKSNIEALADQVSGSSLAFPESWRRGLAAVKLIASEIRKACRL
GGGGAAAGSGVDVRAAEEEWREEQLGVLLEEEAEPGQWGWVAGVDAESGEGEAADPILAE
ATAQEQRSCWPAEALGYGEEVIVLLGWLCFELSRTSDNSSTVPQQEKRLAQQPPADTGFS
YLNQNKMPGISRGPMRHSRGEKTLYLTPKAVRNLVANQKEETQALGPKCTQL

>gi568815595f:194036381_194238230|GENSCAN_predicted_CDS_8|699_bp
atggactgggtggcttataaacaacagaagtttatcacagttctggaggctgcgaagtcc
aacatcgaggcactggcagatcaagtgtctggctcctctcttgcattccctgagtcctgg
cggcggggcctggcagccgtcaagctcatcgcctctgagatcagaaaggcttgcagatta
ggtggtggtggagctgctgctggaagtggtgtggacgtacgggcagcggaggaggagtgg
agagaggagcagctgggggtgttgctggaggaggaagcagagccggggcagtggggctgg
gttgcaggggtggacgcagaatctggggagggagaggctgctgaccctatccttgcagag
gccacagcccaggagcagaggagctgctggccggcagaggccctggggtatggtgaggag
gtcattgtgctgctgggctggctctgcttcgagttatcccgcacctctgacaacagctcc
acggtgccccagcaggaaaagcgcttagctcagcagccgcctgcagacaccggcttttca
tacttaaatcaaaacaagatgccagggataagtcgcggtcccatgcgacacagcaggggt
gaaaagactttgtacctgacccctaaagctgtgaggaatcttgttgctaatcagaaggaa
gaaacccaggctcttggtcctaaatgcacacaattatga