GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:15:41

Sequence gi568815596f:171985678_172188254 : 202577 bp : 42.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14293  14355   63  0  0  125   58    71 0.147   9.01
 1.02 Intr +  38719  38907  189  0  0   47   91   102 0.208   5.26
 1.03 Intr +  70608  70658   51  2  0   90   57    56 0.071   0.89
 1.04 Intr +  71788  71861   74  0  2   74   67    56 0.129  -0.61
 1.05 Intr +  76794  76956  163  0  1   45   93    83 0.252   3.56
 1.06 Intr +  79927  80075  149  0  2   63   66   174 0.563  10.81
 1.07 Intr +  80587  80629   43  1  1   69   79    42 0.903  -1.28
 1.08 Intr +  85230  85393  164  2  2   62  115    90 0.963   6.95
 1.09 Intr +  89794  89941  148  1  1   97   99    99 0.982  11.22
 1.10 Intr +  95451  95570  120  2  0   64   64   168 0.300  11.77
 1.11 Term +  95627  95764  138  1  0   44   48   154 0.189   3.98
 1.12 PlyA +  96734  96739    6                              -1.95

 2.00 Prom +  96761  96800   40                              -4.75
 2.01 Init + 100016 100427  412  1  1   92   59   352 0.215  29.42
 2.02 Intr + 100977 101176  200  1  2   91   82   231 0.995  20.95
 2.03 Intr + 102326 102576  251  1  2  137   45   122 0.635   8.11
 2.04 Intr + 102619 102725  107  1  2   83   41    61 0.665  -0.16
 2.05 Intr + 104492 104660  169  0  1   68   42   168 0.922   8.28
 2.06 Term + 104963 105365  403  2  1   69   43   176 0.365   4.84
 2.07 PlyA + 106032 106037    6                              -0.45

 3.14 PlyA - 106241 106236    6                               1.05
 3.13 Term - 109818 109285  534  0  0    6   54   223 0.155   3.96
 3.12 Intr - 110548 110300  249  1  0    8   -1   226 0.265   2.41
 3.11 Intr - 110992 110931   62  2  2   88   78    65 0.356   3.03
 3.10 Intr - 113106 112931  176  2  2   54   64    77 0.725   0.56
 3.09 Intr - 113734 113632  103  2  1   67   64    80 0.763   1.81
 3.08 Intr - 114753 114570  184  0  1  107   88    99 0.990  10.24
 3.07 Intr - 115267 114890  378  1  0   87  105   231 0.987  18.94
 3.06 Intr - 115969 115785  185  2  2  102   75   244 0.702  23.09
 3.05 Intr - 116862 116462  401  2  2   66   72   533 0.323  42.72
 3.04 Intr - 120367 119976  392  1  2   69   80   275 0.227  17.40
 3.03 Intr - 121001 120818  184  1  1   41   44   251 0.645  14.87
 3.02 Intr - 124563 124413  151  1  1   74   35   169 0.563   8.50
 3.01 Init - 127175 127157   19  2  1   57  101     4 0.526  -1.09
 3.00 Prom - 132119 132080   40                              -6.35

 4.00 Prom + 132213 132252   40                              -5.35
 4.01 Init + 134537 134674  138  1  0  100   87    64 0.402   7.69
 4.02 Intr + 135912 136066  155  2  2   35   68   143 0.648   4.95
 4.03 Intr + 148790 148808   19  2  1   65  111    24 0.050  -1.90
 4.04 Term + 154254 154502  249  2  0   -1   48   290 0.111  10.82
 4.05 PlyA + 156848 156853    6                               1.05

 5.03 PlyA - 156891 156886    6                               1.05
 5.02 Term - 160685 160419  267  2  0   49   49   183 0.448   5.01
 5.01 Init - 167533 167504   30  1  0   78   58    29 0.036  -1.29
 5.00 Prom - 167736 167697   40                              -2.45

 6.00 Prom + 168028 168067   40                              -8.15
 6.01 Init + 175970 176260  291  1  0   81   77   127 0.040   7.37
 6.02 Intr + 181797 181910  114  2  0   50  105    52 0.298   2.82
 6.03 Term + 182213 182644  432  1  0   45   48   223 0.391   8.31
 6.04 PlyA + 185537 185542    6                               1.05

 7.02 PlyA - 186647 186642    6                               1.05
 7.01 Term - 193850 193620  231  2  0   62   45   164 0.834   4.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_1|433_aa
MAAPSGVHLLVRRGKRVEESPLPAERPLPSMEAQGVFTNKNNSEKPKPQSPTNDLSRQIK
IGLQNPNHEKRHDFLHVIFTNGKQGNVFEVLSTELGTSKLLTVQLIVLAATSPKRVFGQR
RQLGLRRKEKEISGEVNCIALAISVNFSMTAQQPFCLQVITLPDHRAEWRQEHRLFGGDL
VDMTTEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIIN
IDVTVYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISM
PVKSCRHTPTPHATVRVTSTFFQIRGVKFATTGHLDCLCEFGLKPYNQPSKASPEVKFEA
LPPPTPHARTHARPFAALGIRAWAPLAQTGPSRIGTRACTLQEPQTSAVLETERVPERGD
TGAFESKGLLGRD

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_1|1302_bp
atggcggcgcccagtggcgtccacctgctcgtccgcagaggtaagcgcgtggaggagagc
cccttacctgctgaaagaccattaccaagcatggaggcccagggggtctttacaaacaag
aataattctgagaaacccaaaccacaaagcccaaccaatgacctctccaggcagataaaa
attggcctccagaaccctaaccatgaaaaaagacatgacttcctacatgtaatcttcacc
aatggcaagcagggtaatgtctttgaagtactcagcaccgagcttggcaccagtaagctc
ttgactgtccaactaatagttctggcagccacctccccaaagcgtgtgtttggtcagcga
aggcagcttggcttaagaagaaaagaaaaagaaatctctggtgaggtgaattgtattgct
ttagccatttcagtcaatttcagcatgacagcccaacagcccttctgcctgcaagttata
accttgccagatcacagagcagagtggagacaagaacacaggctctttgggggagacctg
gttgacatgacaactgaagagatagatgctcttgttcatcgggaaatcatcagtcataat
gcctatccctcacctctaggctatggaggttttccaaaatctgtttgtacctctgtaaac
aacgtgctctgtcatggtattcctgacagtcgacctcttcaggatggagatattatcaac
attgatgtcacagtctattacaatggctaccatggagacacctctgaaacatttttggtg
ggcaatgtggacgaatgtggtaaaaagttagtggaggttgccaggaggtgtagagatgaa
gcaattgcagcttgcagagcaggggctcccttctctgtaattggaaacacaatcagcatg
ccagtcaagagctgcagacatactccaactccccatgccacagttagggttaccagtact
ttctttcaaattagaggagtgaaatttgctactactggtcacttggattgtctctgtgaa
tttggacttaaaccctacaatcagccctccaaggccagtccagaggtgaagtttgaggcc
ctccccccacccaccccacacgcacgcacgcacgctagaccgtttgctgcactaggaatt
cgagcttgggccccactcgcccagactggcccttctcgcatcgggacccgcgcttgcacg
ctgcaggagccgcaaacgtcagctgttctggaaaccgagagggtcccagagagaggagat
acgggcgcatttgagagcaagggcctacttggccgggactga

>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_2|513_aa
MPESLNSPVSGKAVFMEFGPPNQQMSPSPMSHGHYSMHCLHSAGHSQPDGAYSSASSFSR
PLGYPYVNSVSSHASSPYISSVQSYPGSASLAQSRLEDPGTCACQGEGEEEVQGREGKKE
RGRRGEGEREKEKRGERGADSEKSTVVEGGEVRFNGKGKKIRKPRTIYSSLQLQALNRRF
QQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSA
GSPPVPPGWNPNSSSGKGSGGNAGSYIPSYTSWYPSAHQEAMQQPQLMSLPPPGPSIPSG
KEGPRGKKEQWRRDALHLLGAPRGLPAFACPEALDSVAEKTQPDAKQGPGKTRLSDCPSI
NQCAPGDRAQSQAATLGAPQSRSRAEAVPESCGPRQAAKRCSYFSRTRLPALLPAGAGPP
PLGGLFRRAVGSRARKAVICVVTSTHFSIGAGERSDAPGSSDALWEGEEEVVGLLGVGGG
GVMEAGKVVGGGGMMPGTSKPLPGLRLGLLRST

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_2|1542_bp
atgccagaaagtctcaacagccccgtgtcgggcaaggcggtgtttatggagtttgggccg
cccaaccagcaaatgtctccttctcccatgtcccacgggcactactccatgcactgttta
cactcggcgggccattcgcagcccgacggcgcctacagctcagcctcgtccttctcccga
ccgctgggctacccctacgtcaactcggtcagcagccacgcatccagcccctacatcagt
tcggtgcagtcctacccgggcagcgccagcctcgcccagagccgcctggaggacccaggt
acgtgcgcttgccagggagagggagaggaggaggtacaagggagagagggaaagaaggag
cgggggagaagaggagagggagagagagagaaagagaagagaggagagcgaggggcggac
tcggagaagagcacggtggtggaaggcggtgaagtgcgcttcaatggcaagggaaaaaag
atccgtaaacccaggacgatttattccagtttgcagttgcaggctttgaaccggaggttc
cagcaaactcagtacctagctctgccggagagggcggagctcgcggcctctttgggactc
acacagactcaggtcaagatctggttccaaaacaagcgatccaagttcaagaagctgatg
aagcagggtggggcggctctggagggtagtgcgttggccaacggtcgggccctgtctgct
ggctccccacccgtgccgcccggctggaaccctaactcttcatccgggaagggctcagga
ggaaacgcgggctcctatatccccagctacacatcgtggtacccttcagcgcaccaagaa
gctatgcagcaaccccaacttatgtccctcccgcctccaggtccatccatcccgtccgga
aaagaaggacccagagggaagaaggaacagtggaggcgggacgccctccatctcctcgga
gccccgcgaggcctccctgcttttgcatgcccggaggcgctggattccgtcgcggaaaag
acgcagccagacgccaagcaggggcccggaaagacacgtctgtcagactgcccctctatc
aatcagtgcgctccaggggacagggcacagtcccaggcagccaccctgggagctccacaa
tctcgcagccgagccgaggcagtcccggagagctgcgggcccagacaggctgccaagcgc
tgttcctacttctcccgcactcgccttccagcgctgctgcccgcgggagctggccctcca
cctttggggggtcttttcaggcgcgcggtggggagcagagcccggaaggcagtgatctgt
gttgtgacaagcacccatttttcaattggtgctggtgaaagatcagatgcgccaggctct
tccgacgccctttgggaaggggaggaggaagtggtggggctgctgggggtggggggaggc
ggtgtgatggaagcagggaaagtagtcgggggtgggggaatgatgccggggacctccaag
ccccttccaggcctgagattgggacttctccgcagcacctag

>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_3|1005_aa
MKIPLGVPDGFTMPLDHPLPPRRPTPKSPGLAWSTGSRKQRLPSPWLPPGQGLLRHETNP
KGIRKRRFLELLLRGRKHKGTETGIASWTSGPETPVSGTLDETVRSRSSSACSPPIPRGL
ALGSYEGRGRSAASAWDKRSKAEESLSDGIRTRKHRAETSGSPYLPPPFSMFLRSKRMPK
SEKSENREGERKCPGAEEVAGRPQAPVFSQTRFKPPLHSSQITKETGVTLTVDKTVNSLC
HCFPDFRPKMTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQ
ESPTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLG
YTAAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRF
QKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCA
SPPVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSAS
HLQATAPLLHPTQTPQPHHHHHHHGGGGAPAATCSGPSQALLTPGATKRAPLSGEPDSSL
AKASLKGRISDLSPGSRLFRAPPRTCLPSPPGSGQSRAQSSSRCPGREASRPRATFTSFR
GCDTARRTHNDTHSNTVTSHTHTPSHSYNTDTRSHAHSHSYPYTLIDKLTYAHSCILTHR
LIYTGLSQLRQNAGTELQGQLPAAQFSGRRRGAEEAGAKRSSEVVPSAQENNVREQEAPS
PLKKSFLRAVKLECNSPTPGVPRTRSKVKSPLLSLHGTATTSGFNLFREKKVQAGLGGAA
RRLHAKNADSLQTDLSSLGLSGSPTSPPGPERTSCSVPAVCGLRGSAPKEALLGRVPSRV
GSRARRWGPRVGCRVGEGAEPAHEAGRGCWAEDYNFGAGEARAKGLDLEHARVTPGDRLG
PARSKRGRLPTLPLLRPDCGPGVSDTREVKSSHPEQWGLLAGEPD

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_3|3018_bp
atgaagattcccctaggcgtgcctgacggcttcacaatgcccctggaccacccactgccg
cctcggaggcccacgcccaaatcccctggcctggcctggtccactggatcccggaaacag
cgtctgccttcaccttggctgccgccaggacaaggcctgcttagacacgagacaaacccc
aaagggattcgaaagcgcaggttcctagagctactacttcggggacgaaaacacaaaggt
accgaaactggcattgcctcttggaccagcggcccggaaactcccgtctccgggaccctc
gacgagactgtgaggagtaggagcagcagcgcatgcagccctcccatcccccgagggttg
gcgttaggctcctacgaggggagaggtcgcagcgcggcgtcagcctgggacaagcgatcc
aaagcagaagaaagtctcagcgatgggattcgaacacgcaagcacagagcagaaacttca
ggctccccttatttacccccaccgttctctatgttcctgcggagcaaaagaatgccgaag
tcagagaaatccgaaaacagagaaggggaaagaaagtgccctggggcagaagaggtagct
ggccgccctcaagcaccagtgttctcccaaactcgttttaagcctccccttcactcctct
cagatcactaaggagacgggcgtcactctgactgtagacaaaactgtcaattccctatgc
cactgcttccctgacttcagaccaaagatgactggagtctttgacagtctagtggctgat
atgcactcgacccagatcgccgcctccagcacgtaccaccagcaccagcagcccccgagc
ggcggcggcgccggcccgggtggcaacagcagcagcagcagcagcctccacaagccccag
gagtcgcccacccttccggtgtccaccgccaccgacagcagctactacaccaaccagcag
cacccggcgggcggcggcggcggcgggggctcgccctacgcgcacatgggttcctaccag
taccaagccagcggcctcaacaacgtcccttactccgccaagagcagctatgacctgggc
tacaccgccgcctacacctcctacgctccctatggaaccagttcgtccccagccaacaac
gagcctgagaaggaggaccttgagcctgaaattcggatagtgaacgggaagccaaagaaa
gtccggaaaccccgcaccatctactccagtttccagctggcggctcttcagcggcgtttc
caaaagactcaatacttggccttgccggagcgagccgagctggcggcctctctgggcctc
acccagactcaggtcaaaatctggttccagaaccgccggtccaagttcaagaagatgtgg
aaaagtggtgagatcccctcggagcagcaccctggggccagcgcttctccaccttgtgct
tcgccgccagtctcagcgccggcctcctgggactttggtgtgccgcagcggatggcgggc
ggcggtggtccgggcagtggcggcagcggcgccggcagctcgggctccagcccgagcagc
gcggcctcggcttttctgggcaactacccctggtaccaccagacctcgggatccgcctca
cacctgcaggccacggcgccgctgctgcaccccactcagaccccgcagccgcatcaccac
caccaccatcacggcggcgggggcgccccggctgcgacctgcagtggcccgtctcaggcc
ctgctcactcccggggccaccaaacgggcccctctctcgggggaaccggacagcagcttg
gcaaaggcctccctaaaaggccgcatttctgacctgagccccgggtctcggctgtttcga
gccccgcctcggacttgccttccctcccctccggggtccggtcagtcacgtgctcagagc
tcaagccgctgcccaggccgggaagccagccggccgagagctacgtttacatctttccga
ggctgcgacaccgcgaggcgcacacacaatgacacacactcgaacaccgtcacatcacac
actcatactccatcacactcttacaacactgacacacgaagtcatgcacactcgcattca
tacccttacacactgatagacaaactcacatatgcacactcatgtatacttactcacaga
cttatatacactgggctctcccaactcaggcagaacgcgggcactgagctccagggccaa
ctgcctgccgcccagttcagtggtagaagacgaggggcagaagaggcgggtgcaaagaga
agctctgaagtggtcccctccgcccaagagaacaatgtccgggagcaagaagccccgtcc
cctctcaaaaagtcgttcttacgggcagtaaaactcgagtgcaactcccccactcctggc
gtcccccgaactcgctcaaaagtcaaaagcccgctcctttccctccatggaacagcgacc
accagtggctttaacctgtttagggaaaagaaagtgcaggcaggtcttggaggagcagct
cggcgcctccacgccaagaacgcagacagcctccagacagacctttcttccctcggcctc
tccggctcccccactagtcctcccgggccagagcgcacaagctgcagtgtcccggcagtt
tgcgggctgcgtggcagcgctccgaaagaggcccttttggggagggtccccagtcgagtc
gggtcccgggctaggagatgggggccgagggtcgggtgccgagtgggagaaggtgcagaa
ccggcccacgaggcgggtcgggggtgctgggcagaggattacaacttcggggcaggagaa
gcgagggcgaaaggactggacttggagcacgctcgggtgaccccgggggacagactgggg
cccgcacggagcaaacgtggcaggctgcccacgctgccgcttctccgtcccgattgtggt
ccaggagtctcggacacccgggaggtgaaatcatcgcacccggaacaatggggacttctg
gccggagaaccggactga

>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_4|186_aa
MTNTAKAKSLFAMIKEKAGPDYDVEFTVCSGWFKQFQNCYPLHNVKAISATEEDTEKTLM
QIWEDYNIYDCIKKNLAWAWGDVTKECMDGIWKKRLKRGSTARLSMKAERDEEAAEEMLE
ASRGWFMSFKERSCLHNIKVQGEVASADVEATASYSEDLAKTIDEGDCMKQKLFHVDETA
LEEDAI

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_4|561_bp
atgaccaacacagccaaagcaaaaagtttgtttgcaatgataaaagaaaaggctggacct
gactacgatgttgaatttactgtttgctctgggtggtttaaacaattccagaattgttat
ccattacataatgtgaaagctatttctgcaactgaagaagacactgagaaaacactgatg
caaatctgggaggattacaacatctatgactgcattaagaagaatcttgcttgggcttgg
ggtgatgtcaccaaggagtgtatggatggcatctggaagaagagactcaagaggggaagt
acagcacgcttgtctatgaaggctgagagagatgaggaagctgcagaagaaatgttggaa
gccagcagaggttggttcatgagctttaaggaaagaagctgtctccataacataaaagtg
caaggtgaagtggcaagtgctgatgtagaagctacagcaagttattcagaagatctagct
aagaccatcgatgaaggtgactgcatgaaacaaaagcttttccatgtagatgaaacagcc
ttggaagaagatgccatctag

>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_5|98_aa
MEKDEKFKMLNLSRREVNTMQDEVVSSWKPEGAQAESIPATDKNELQTPRPGPWHPGAPS
RAMEEAAPSKAFPCLETPVKSKAWAVEEGSCEQQAQKT

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_5|297_bp
atggaaaaagatgaaaagtttaagatgctgaacctgagtcgacgagaggtcaacactatg
caggatgaggtggtcagctcatggaagcccgagggagcccaggcagaaagcatcccagcc
acggacaaaaatgagctccagacacccaggcctgggccatggcacccaggcgcaccttcc
agggctatggaggaggctgccccatcaaaagcatttccatgtctggaaacacctgtgaaa
tctaaggcgtgggcagtggaagagggcagctgtgagcagcaggcacagaagacctga

>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_6|278_aa
MHSQAGWLLQWDRQLQVPAQVPAHCEAAAGLRAPQAAFIAGTEEHSGALKLGDSRNCRAP
KGESQPWLGELPGLSHPTEGCSASLLLSSFLLAPHNVQRDWQHLPRPRDLWNFELEKDDL
GYLAEAISKQQSIQEPIDLVPCVPAAPAMAERGQCRAHAVASEGGSPKPWQLPCGVESVG
TQKSRIEVWEPPPRFQKMYGNAWLSRQKFAAGVRPSWRTSARAVWKGNVGLEPPHRVPTG
ALPIGAEEVHHPPEPRMVDPQTACTVHLKKLQTLNASP

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_6|837_bp
atgcacagtcaggcaggctggctgctgcagtgggacaggcagctccaggtgccggcacag
gtgccagctcactgtgaggctgcagctggactaagggcaccacaagcagctttcatagct
ggcactgaggaacacagtggtgccttgaagcttggagactccaggaactgcagggcccca
aaaggggagtcacagccctggcttggggagctcccaggtctgtcccaccccactgagggc
tgcagtgcttctctccttctctcttctttcctccttgctccccacaacgtgcaaagagac
tggcagcatttgccccgccctagagatttgtggaactttgaacttgagaaagatgattta
gggtatctggcagaagccatttctaagcagcaaagcattcaagagcctatagacttggtg
ccctgtgtcccagctgctccagccatggctgaaaggggccaatgtagagctcatgctgtg
gcttcagagggtggaagccccaagccttggcagcttccatgtggtgttgagtctgtgggt
acacagaagtcaagaattgaggtttgggaacctccacctagatttcagaagatgtatgga
aatgcctggctgtccaggcaaaagtttgctgcaggggtgaggccctcatggagaacctct
gctagggcagtgtggaagggaaatgtggggttggaacctccacacagagtccctactggg
gcactgcctattggagctgaagaggtccaccatcctccagaacccagaatggtagatcca
cagacagcttgcaccgtgcacctgaaaaagctgcagacactcaatgctagcccgtga

>gi568815596f:171985678_172188254|GENSCAN_predicted_peptide_7|76_aa
GGLRVGQSQDQTLALTQPWGNVAPSGKSLMAASAASTINGQCLAQLRATGPLVMPGLLQR
GEKKKEECIVKCLKVL

>gi568815596f:171985678_172188254|GENSCAN_predicted_CDS_7|231_bp
ggagggctgagggtggggcagtcacaggatcagactctggctctaactcagccttgggga
aatgttgctccttctgggaaatccctcatggctgcatctgctgcatctaccatcaatggg
caatgcctggcccaactcagagccacaggtcctctggtcatgccaggtttgctgcagaga
ggagagaagaaaaaggaggaatgcattgtaaagtgccttaaagttctctga