GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:10:11

Sequence gi568815591r:44862742_45078961 : 216220 bp : 47.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -     51     46    6                               1.05
 1.01 Sngl -  22607  21669  939  2  0   76   47  2062 0.961 197.41
 1.00 Prom -  24814  24775   40                              -3.06

 2.07 PlyA -  25011  25006    6                               1.05
 2.06 Term -  25267  25210   58  0  1  100   46    67 0.193   0.86
 2.05 Intr -  29906  29801  106  0  1   49   84    83 0.156   3.27
 2.04 Intr -  30721  30666   56  0  2  119   58    27 0.115   1.42
 2.03 Intr -  59448  59345  104  0  2   45   81    62 0.022   0.17
 2.02 Intr -  73036  72842  195  1  0   48   80   161 0.620  10.91
 2.01 Init -  74815  74702  114  1  0   76   83    33 0.439   1.83
 2.00 Prom -  88162  88123   40                              -3.16

 3.22 PlyA -  88259  88254    6                               1.05
 3.21 Term - 100154  99998  157  1  1  112   53   222 0.999  18.51
 3.20 Intr - 100383 100229  155  0  2   87   84   224 0.999  20.77
 3.19 Intr - 101421 101308  114  0  0   90   89   253 0.984  26.24
 3.18 Intr - 101778 101674  105  0  0  103   72    91 0.674   9.41
 3.17 Intr - 102348 102204  145  2  1   91   84   209 0.998  21.08
 3.16 Intr - 103119 102896  224  0  2   65   79   165 0.994  10.23
 3.15 Intr - 103614 103332  283  2  1  102  100   300 0.521  30.02
 3.14 Intr - 104097 103931  167  0  2  112   84   236 0.983  24.36
 3.13 Intr - 104996 104864  133  1  1   47   95   175 0.975  14.75
 3.12 Intr - 105217 105143   75  0  0   90   99   207 0.999  20.63
 3.11 Intr - 106729 106672   58  2  1   89   85    87 0.777   6.44
 3.10 Intr - 107134 106927  208  1  1   74   48   354 0.739  28.65
 3.09 Intr - 107413 107299  115  0  1   59   49   287 0.999  22.35
 3.08 Intr - 107996 107851  146  2  2   40   94   289 0.999  23.78
 3.07 Intr - 108318 108094  225  0  0   61   75   317 0.999  25.88
 3.06 Intr - 109048 108932  117  1  0   71   93   175 0.999  16.96
 3.05 Intr - 112486 112433   54  1  0  106   82    78 0.981   8.18
 3.04 Intr - 112908 112743  166  2  1   78   86   357 0.998  34.46
 3.03 Intr - 113916 113823   94  1  1   96  105    97 0.999  11.22
 3.02 Intr - 114330 114122  209  2  2   81   82   507 0.999  48.12
 3.01 Init - 116220 116126   95  0  2   94   96   196 0.999  20.85
 3.00 Prom - 120844 120805   40                              -7.96

 4.00 Prom + 121022 121061   40                              -6.76
 4.01 Init + 129618 129629   12  2  0   84   86    14 0.351   0.82
 4.02 Intr + 136973 137116  144  1  0  117   96    53 0.748   9.48
 4.03 Intr + 139856 139897   42  1  0   98   87    36 0.138   2.94
 4.04 Intr + 169263 169346   84  2  0   88   49   101 0.342   6.22
 4.05 Intr + 175512 175685  174  2  0   97  115    99 0.719  13.64
 4.06 Intr + 201177 201260   84  2  0   77   86    30 0.614   1.72
 4.07 Intr + 201722 201905  184  1  1  102   92   256 0.945  26.76
 4.08 Intr + 205702 205838  137  2  2   41  100    76 0.950   4.39
 4.09 Intr + 207085 207220  136  0  1  100   80    86 0.981   9.14
 4.10 Intr + 209985 210042   58  1  1   98   59   102 0.945   6.24
 4.11 Intr + 210719 210830  112  2  1   77   78   165 0.998  14.78
 4.12 Intr + 211529 211667  139  1  1  117   97   354 0.999  39.24
 4.13 Term + 213036 213316  281  1  2   89   45   525 0.999  43.91
 4.14 PlyA + 213703 213708    6                              -4.33

 5.00 Prom + 214949 214988   40                             -12.87
 5.01 Init + 215286 215962  677  2  2   40   77   472 0.513  33.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:44862742_45078961|GENSCAN_predicted_peptide_1|312_aa
MADGDSGSERGGGGGPCGFQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLK
IAEVGAGGSKSRLTLSMAVAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALK
SEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQGLI
EFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNK
YGVFLRVSEVKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQERQRDKLYERRGGGSGG
GEESEGEEVDED

>gi568815591r:44862742_45078961|GENSCAN_predicted_CDS_1|939_bp
atggcggacggcgacagcggcagcgagcgcggcggcggcggtgggccgtgcgggttccag
cccgcgtcccgcggcggcggcgagcaagagacgcaggagctggcctcgaagcggctggac
atccagaacaagcgcttctacttagatgtgaagcagaacgccaagggccgcttcctcaag
atcgccgaggtgggcgcgggcggttccaagagccgcctcacgctgtccatggcggtggcc
gccgagttccgcgactcgctgggcgacttcatagaacactacgcgcagctgggccctagc
agccccgagcagctggcggctggcgccgaggagggcggcgggccgcggcgcgcgctcaag
agcgaattcttggtgcgtgagaaccgcaagtactacctggacctcaaggagaaccagcgc
ggccgcttcctgcgcatccgccaaacggtcaaccgcggcggtggcggcttcggcgcgggc
cccgggccgggcggcttgcagagcggccagaccatcgcgctgcctgcgcagggcctcatc
gagttccgcgacgcgctggcgaagctcatagacgactacggaggcgaggacgacgagctg
gcaggcggcccgggaggcggcgccgggggcccagggggcggcctgtatggagagctcccg
gagggcacctccatcaccgtggactccaagcgcttcttcttcgatgtgggctgcaacaaa
tacggggtgtttctgcgagtgagcgaggtgaagccgtcctaccgcaatgccatcaccgta
cccttcaaagcctggggcaagttcggaggcgccttttgccggtatgcggatgagatgaaa
gaaatccaggaacgacagagggataagctttatgagcgacgtggtgggggcagcggcggc
ggcgaagagtcagagggtgaggaggtggatgaggattga

>gi568815591r:44862742_45078961|GENSCAN_predicted_peptide_2|210_aa
MGQQVLCSTGYTLCSIILGQRNTRASPVPSEKCKTQIGATAITQFSSPPADSEGTVEAAM
LLQPKDLRQGYPHSGSGIPTYWSISREGTQTQASTILSTSPGWVSQDSATQGVESPCPPP
PPPTICCRPLFHASAIPCIRHNRQRLTHYGKLSQPGQTEMKKHKDEKRNDTNTVMLTFWG
ICVKNTIIAAVLKLMSNPPYLLAAPTPNYY

>gi568815591r:44862742_45078961|GENSCAN_predicted_CDS_2|633_bp
atggggcagcaggtcctctgctccactggctacaccctatgctccatcattttaggccag
agaaacaccagggcctctcctgtgcccagtgagaaatgcaagactcaaatcggagccact
gccatcacccagtttagctcaccacctgcagactcagaggggacagtggaggctgcaatg
ttgctgcaaccaaaggacctgcgccaaggatacccccacagcggtagtgggatccccact
tactggagcatctcccgtgaaggcacacagacccaagcatcaaccatcctcagcaccagc
ccagggtgggtctcacaggactcagcaacccagggcgttgagtccccatgccccccacca
ccacccccaaccatctgctgccggccacttttccatgcttcagccatcccctgcatcagg
cacaacaggcaacgtctcactcactacgggaagttgagccagccaggacagacagagatg
aagaaacataaagatgaaaagcgtaatgacacaaacaccgtgatgttaacattttgggga
atctgtgtgaagaatactattattgcagctgttctgaaactgatgtcaaatccaccctac
ctgctggcagctcccacacctaattactactga

>gi568815591r:44862742_45078961|GENSCAN_predicted_peptide_3|1014_aa
MEDEEGPEYGKPDFVLLDQVTMEDFMRNLQLRFEKGRIYTYIGEVLVSVNPYQELPLYGP
EAIARYQGRELYERPPHLYAVANAAYKAMKHRSRDTCIVISGESGAGKTEASKHIMQYIA
AVTNPSQRAEVERVKDVLLKSTCVLEAFGNARTNRNHNSSRFGKYMDINFDFKGDPIGGH
IHSYLLEKSRVLKQHVGERNFHAFYQALDSDEQSHQAVTEAMRVIGFSPEEVESVHRILA
AILHLGNIEFVETEEGGLQKEGLAVAEEALVDHVAELTATPRDLVLRSLLARTVASGGRE
LIEKGHTAAEASYARDACAKAVYQRLFEWVVNRINSVMEPRGRDPRRDGKDTVIGVLDIY
GFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGITWQSVEYFNNATIVDLV
ERPHRGILAVLDEACSSAGTITDRIFLQTLDMHHRHHLHYTSRQVPPAVPVPPQWADKTM
EFGRDFRIKHYAGDVTYSVEGFIDKNRDFLFQDFKRLLYNSTDPTLRAMWPDGQQDITEV
TKRPLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGKLDENHCRHQVAYLGLLE
NVRVRRAGFASRQPYSRFLLRCGVGRVGSIISPPGLGHTALSCGDRYKMTCEYTWPNHLL
GSDKAAVSALLEQHGLQGDVAFGHSKLFIRSPRTLVTLEQSRARLIPIIVLLLQKAWRGT
LARWRCRRLRAIYTIMRWFRRHKVRAHLAELQRRFQAARQPPLYGRDLVWPLPPAVLQPF
QDTCHALFCRWRARQLVKNIPPSDMPQIKAKVAAMGALQGLRQDWGCRRAWARDYLSSAT
DNPTASSLFAQRLKTLQDKDGFGAVLFSSHVRKVNRFHKIRNRALLLTDQHLYKLDPDRQ
YRVMRAVPLEAVTGLSVTSGGDQLVVLHARGQDDLVVCLHRSRPPLDNRVGELVGVLAAH
CQGEGRTLEVRVSDCIPLSHRGVRRLISVEPRPEQPEPDFRCARGSFTLLWPSR

>gi568815591r:44862742_45078961|GENSCAN_predicted_CDS_3|3045_bp
atggaggacgaggaaggccctgagtatggcaaacctgactttgtgcttttggaccaagtg
accatggaggacttcatgaggaacctgcagctcaggttcgagaagggccgcatctacacc
tacatcggtgaggtgctggtgtccgtgaacccctaccaggagctgcccctgtatgggcct
gaggccatcgccaggtaccagggccgtgagctctatgagcggccaccccatctctatgct
gtggccaacgccgcctacaaggcaatgaagcaccggtccagggacacctgcatcgtcatc
tcaggggagagtggggcagggaagacagaagccagtaagcacatcatgcagtacatcgct
gctgtcaccaatccaagccagagggctgaggtggagagggtcaaggacgtgctgctcaag
tccacctgtgtgctggaggcctttggcaatgcccgcaccaaccgcaatcacaactccagc
cgctttggcaagtacatggacatcaactttgacttcaagggggacccgatcggaggacac
atccacagctacctactggagaagtctcgggtcctcaagcagcacgtgggtgaaagaaac
ttccacgccttctaccaagccttggacagtgatgagcagagccaccaggcagtgaccgag
gccatgagggtcatcggcttcagtcctgaagaggtggagtctgtgcatcgcatcctggct
gccatattgcacctgggaaacatcgagtttgtggagacggaggagggtgggctgcagaag
gagggcctggcagtggccgaggaggcactggtggaccatgtggctgagctgacggccaca
ccccgggacctcgtgctccgctccctgctggctcgcacagttgcctcgggaggcagggaa
ctcatagagaagggccacactgcagctgaggccagctatgcccgggatgcctgtgccaag
gcagtgtaccagcggctgtttgagtgggtggtgaacaggatcaacagtgtcatggaaccc
cggggccgggatcctcggcgtgatggcaaggacacagtcattggcgtgctggacatctat
ggcttcgaggtgtttcccgtcaacagtttcgagcagttctgcatcaactactgcaacgag
aagctgcagcagctattcatccagctcatcctgaagcaggaacaggaagagtacgagcgc
gagggcatcacctggcagagcgttgagtatttcaacaacgccaccattgtggatctggtg
gagcggccccaccgtggcatcctggccgtgctggacgaggcctgcagctctgctggcacc
atcactgaccgaatcttcctgcagaccctggacatgcaccaccgccatcacctacactac
accagccgccaggtgcccccggctgtcccagtgccaccacagtgggctgacaagaccatg
gagtttggccgagacttccggatcaagcactatgcaggggacgtcacgtactccgtggaa
ggcttcatcgacaagaacagagatttcctcttccaggacttcaagcggctgctgtacaac
agcacggaccccactctacgggccatgtggccggacgggcagcaggacatcacagaggtg
accaagcgccccctgacggctggcacactcttcaagaactccatggtggccctggtggag
aaccttgcctccaaggagcccttctacgtccgctgcatcaagcccaatgaggacaaggta
gctgggaagctggatgagaaccactgtcgccaccaggtcgcatacctggggctgctggag
aatgtgagggtccgcagggctggcttcgcttcccgccagccctactctcgattcctgctc
aggtgtggggtgggcagggtgggctccatcatctctcccccaggcctgggccacactgcc
ctgtcctgtggtgacaggtacaagatgacctgtgaatacacatggcccaaccacctgctg
ggctccgacaaggcagccgtgagcgctctcctggagcagcacgggctgcagggggacgtg
gcctttggccacagcaagctgttcatccgctcaccccggacactggtcacactggagcag
agccgagcccgcctcatccccatcattgtgctgctattgcagaaggcatggcggggcacc
ttggcgaggtggcgctgccggaggctgagggctatctacaccatcatgcgctggttccgg
agacacaaggtgcgggctcacctggctgagctgcagcggcgattccaggctgcaaggcag
ccgccactctacgggcgtgaccttgtgtggccgctgccccctgctgtgctgcagcccttc
caggacacctgccacgcactcttctgcaggtggcgggcccggcagctggtgaagaacatc
cccccttcagacatgccccagatcaaggccaaggtggccgccatgggggccctgcaaggg
cttcgtcaggactggggctgccgacgggcctgggcccgagactacctgtcctctgccact
gacaatcccacagcatcaagcctgtttgctcagcgactaaagacacttcaggacaaagat
ggcttcggggctgtgctcttttcaagccatgtccgcaaggtgaaccgcttccacaagatc
cggaaccgggccctcctgctcacagaccagcacctctacaagctggaccctgaccggcag
taccgggtgatgcgggccgtgccccttgaggcggtgacggggctgagcgtgaccagcgga
ggagaccagctggtggtgctgcacgcccgcggccaggacgacctcgtggtgtgcctgcac
cgctcccggccgccattggacaaccgcgttggggagctggtgggcgtgctggccgcacac
tgccagggggagggccgcaccctggaggttcgcgtctccgactgcatcccactaagccat
cgcggggtccggcgcctcatctccgtggagcccaggccggagcagccagagcccgatttc
cgctgcgctcgcggctccttcaccctgctctggcccagccgctga

>gi568815591r:44862742_45078961|GENSCAN_predicted_peptide_4|528_aa
MGLRRPELRLPGREAGWEVGRRKDGGKLKKLELLPRALPRALSGRSEQGAGQDTGISELA
ENLWTKLRAEQTLPLKSPIILSENSSYPAFRAEWPGIVSPFKRVFLKGEKSRDKKAHEKV
TERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAK
RAHQLPGHLTQEHDAVLSLSAYNVKLAWRDGEDIILRVPIHDIAAVSYVRDDAAHLVVLK
TAQDPGISPSQSLCAESSRGLSAGSLSESAVGPVEACCLVILAAESKVAAEELCCLLGQV
FQVVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDIKETYEVEASTFCFPESVDV
GGASPHSKTISESELSASATELLQDYMLTLRTKLSSQEIQQFAALLHEYRNGASIHEFCI
NLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRHRRALSTTS
SSTTNGNRATGSSDDRSAPSEGDEWDRMISDISSDIEALGCSMDQDSA

>gi568815591r:44862742_45078961|GENSCAN_predicted_CDS_4|1587_bp
atggggctgaggagacctgagctccgcctccctggacgcgaggcaggctgggaagtcggc
cgccgtaaagatggcggcaaattgaaaaagttggagctgctcccgcgcgcgctcccgcgc
gcgctgagtgggcggagcgaacagggggctggacaggacacaggaatcagtgagttggca
gagaacctatggaccaaactgagagctgagcaaacattacctctgaaaagccccatcatc
ctcagcgagaacagcagctaccctgcattccgtgctgaatggcctggaattgtctcgcca
tttaaacgagtattcctaaaaggtgaaaagagtagagataagaaagcccatgagaaggtg
acagagaggcgccctctgcacactgtggtgttgtcattgcctgagcgcgtcgagccagac
agactgctgagcgactatattgagaaggaggtaaagtatttaggtcagttaacgtccata
ccaggatacctgaatccctccagtaggactgaaatcctgcatttcatagacaatgcaaag
agagcccaccagcttccgggacacttgactcaggagcacgatgctgtgctcagcctgtct
gcgtacaacgtcaagctggcctggagggacggggaggatatcatcctcagggtgcccatc
catgacatcgccgccgtctcctatgttcgggatgacgctgcacacctggtggtcctgaag
acagcccaggacccagggatctcccccagccagagtctgtgtgcggaaagttccagaggc
ctcagtgcaggctccctgtcggagagtgcagttgggcccgtggaggcatgctgcctggtc
atcctggctgcagagagcaaggtcgctgcggaggagctttgctgtctgctaggccaggtc
ttccaggttgtttacacggagtccaccatcgactttctggacagagcgatatttgatggg
gcctctaccccgacccaccacctgtccctgcacagcgatgactcttctacaaaagtggac
attaaggagacctacgaggtggaagccagcactttctgcttccctgaatctgtggatgtg
ggtggtgcatcaccccacagcaagaccatcagtgagagcgagctgagcgccagcgccact
gagctgctgcaggactacatgctgacgctgcgcaccaagctgtcatcacaggagatccag
cagtttgcagcactgctgcacgagtaccgcaatggggcctctatccacgagttctgcatc
aacctgcggcagctctacggggacagccgcaagttcctgctgcttggtctgaggcccttc
atccctgagaaggacagccagcacttcgagaacttcctggagaccattggcgtgaaggat
ggccgcggcatcatcactgacagctttggcaggcaccggcgggccctgagcaccacatcc
agttccaccaccaatgggaacagggccacgggcagctctgatgaccggtcggcaccctca
gagggggatgagtgggaccgcatgatctcggacatcagcagcgacattgaggcgctgggc
tgcagcatggaccaggactcagcatga

>gi568815591r:44862742_45078961|GENSCAN_predicted_peptide_5|226_aa
MLAPPGSIPGVAPVLQSLVFASRKSRGHGADEGTPEGNEGTPESNEGTSEGGDRTPEGSE
GTPGSNGTSGSDGTSEGDEGTPEGGEGTPESSEGTPESNEGTLEGEGTPEGGEGTPESNE
GHERVVRGHQRVMGHQRAMRGHRRVLRGHQRAVKGRQRVLRGHQRVVRGHQRVMGTPEGE
GTPEGSEGTPESIGTPEGSEGTPEGDEGTPESNEGTSESNEGTSRR

>gi568815591r:44862742_45078961|GENSCAN_predicted_CDS_5|678_bp
atgcttgcccctccagggtccatcccaggtgtggcccccgtgctgcagtcgctggtcttt
gctagcagaaagagtagaggacatggagcagatgaagggacaccagagggtaatgagggg
acaccagagagtaatgaagggacatcagagggtggtgacaggacaccagagggcagtgag
gggacaccagggagtaatgggacatcagggagtgatgggacatcagaaggtgatgagggg
acaccagagggtggtgaggggacaccagagagtagtgaggggacaccagagagtaatgag
gggacactagaaggtgaggggacaccagagggcggtgaagggacaccagagagtaatgag
gggcacgagagggtggtgaggggacatcagagggtgatgggacaccagagggcgatgagg
ggacaccggagagtattgaggggacaccagagggcagtgaagggacgccagagagtactg
aggggacaccagagggtggtgaggggacaccagagagtaatggggacaccagaaggtgag
gggacgccagagggcagtgaagggacaccggagagtattgggacaccagagggcagtgag
gggacaccagagggcgatgaggggacaccagagagtaatgaggggacatcagagagtaat
gaggggacatcaaggcgn