GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:00:52

Sequence gi568815589f:116597743_116799701 : 201959 bp : 41.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   5702   5875  174  1  0   77   49   224 0.993  12.04
 1.02 PlyA +   7290   7295    6                               1.05

 2.07 PlyA -   8041   8036    6                               1.05
 2.06 Term -   8560   8478   83  2  2  114   34    84 0.075   2.48
 2.05 Intr -  20730  20582  149  2  2   87   96   173 0.726  16.96
 2.04 Intr -  22701  22568  134  0  2  105   40   120 0.694   7.42
 2.03 Intr -  28949  28803  147  2  0  110   86    -8 0.574   0.71
 2.02 Intr -  54051  53786  266  1  2   94   83   272 0.503  23.61
 2.01 Init -  55247  55160   88  2  1   81   44    47 0.700   0.45
 2.00 Prom -  68896  68857   40                              -5.75

 3.00 Prom +  71519  71558   40                              -3.75
 3.01 Init +  72566  72617   52  1  1   51   60    58 0.239   0.68
 3.02 Intr +  77269  77445  177  2  0   75   36   110 0.052   3.47
 3.03 Term +  81938  83094 1157  0  2   15   42   535 0.113  32.65
 3.04 PlyA +  83103  83108    6                               1.05

 4.00 Prom +  84812  84851   40                              -4.05
 4.01 Sngl + 100001 101962 1962  1  0   78   50  2005 0.998 189.39
 4.02 PlyA + 104189 104194    6                               1.05

 5.00 Prom + 111968 112007   40                              -4.45
 5.01 Init + 121931 122147  217  1  1   81   48   199 0.492  14.10
 5.02 Term + 123937 124037  101  2  2   52   41   105 0.338  -0.49
 5.03 PlyA + 124516 124521    6                              -0.45

 6.09 PlyA - 124583 124578    6                               1.05
 6.08 Term - 124797 124658  140  1  2   87   38    49 0.198  -3.06
 6.07 Intr - 127659 127375  285  1  0   93  102    42 0.453   2.49
 6.06 Intr - 128208 128029  180  1  0  114  121   246 0.995  29.42
 6.05 Intr - 131354 131250  105  0  0  121   94   126 0.996  15.77
 6.04 Intr - 134142 134044   99  1  0   53   84    96 0.920   4.86
 6.03 Intr - 135835 135657  179  0  2   85   99   252 0.833  24.64
 6.02 Intr - 150319 150097  223  2  1   15   78   138 0.135   1.76
 6.01 Init - 156273 156213   61  0  1   64   70    98 0.326   5.06
 6.00 Prom - 156553 156514   40                              -3.65

 7.03 PlyA - 158884 158879    6                               1.05
 7.02 Term - 165767 165697   71  0  2  102   48    71 0.570   1.62
 7.01 Init - 170576 170531   46  2  1   85  103    40 0.540   6.10
 7.00 Prom - 172693 172654   40                              -2.25

 8.03 PlyA - 173302 173297    6                               1.05
 8.02 Term - 179452 179315  138  1  0   84   38   107 0.301   2.28
 8.01 Intr - 191463 191376   88  2  1   89   95   104 0.683  10.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  29205  29167   39  0  0   65   76    41 0.865   0.86
S.002 Term - 115573 115467  107  2  2   82   45   117 0.806   4.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_1|57_aa
MVTGDEQIKEVRDWIVGQKIHKNPDLTYCDGKNPDEEKAANQELKILKEPVSVEARG

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_1|174_bp
atggtcactggagatgagcagatcaaagaagtgagagactggattgttggacagaaaatc
cacaaaaaccctgaccttacctattgtgatggcaagaacccagatgaagagaaagctgca
aaccaggaacttaaaatacttaaagaaccagtttcagttgaggcaagaggatga

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_2|288_aa
MKNDSLKTVTLEWSIDRRDVERQRGKAAQKTTELGSKKELKSMPFITYLSGLLTAQMLSD
DQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAL
EASYFISSKTSGQKRYQPHCPPSCDHNCLQKGLYLHSPPQFPFNGFKAFKSALMSSYWCS
GKGDVIDDWCRCDLSAFDANGLPNCSPLLQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTK
VSDYILQHKKVDEYTDTDLYTGLAPSLSPSEKPSLGQFRDAVRKAKHK

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_2|867_bp
atgaagaatgactccctaaagacagtaacattggaatggagcattgatagaagagatgtg
gagaggcagaggggaaaagcagcacagaagaccacagagctgggcagcaagaaggagctc
aagtccatgcccttcatcacctacctctcaggtttgctgacagcccagatgctgtcagat
gaccagctcatttcaggtgtggagattcgctgtgaggagaaggggcgctgtccatctacc
tgtcacctttgccgccggccaggcaaggagcagctgagccccacaccagtgctgctggaa
atcaaccgtgtggtgccactttataccctcatccaagacaatggcacaaaggaggcctta
gaagcttcttattttatatcttcaaaaacttctggacaaaaaaggtatcaaccccactgt
cctccaagctgtgatcacaattgtctccaaaagggactctacctccatagcccaccccaa
tttcctttcaatggcttcaaggccttcaagagtgcactgatgagttcctactggtgctca
gggaaaggggatgtgatcgatgactggtgcaggtgtgacctcagcgcctttgatgccaat
gggctccccaactgcagcccccttctgcagccggtgctgcggctgtccccaacagtggag
ccctccagtactgtggtctccttggagtgggtggatgttcagccagctattgggaccaag
gtctccgactatattctgcagcataagaaagtggatgaatacacagacactgacctgtac
acaggtttggcgccctctttgtctccttcagagaagccatcgctcggtcagttccgggac
gctgttaggaaagccaagcataagtag

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_3|461_aa
MMIMMTIPPDKVSTRAGVGKVNPLGSYKFRGLSRIALVATCSWFSAPPRSSNGSRGQPKW
LPSSFGLGLTLVLYWWEHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKM
FFETNENKDTTYQNLWDTFKAVCRGKFIAINAHKRKQERSKIDTLTSQLKELKKQEQTHS
KASRRQEITKIRAEVKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDA
IKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTIPRLNQEEVESLNRP
ITGSEIVAIINSLPTKKSPGPDGFTAEFYQGYKEELVSFLLKLFQSTEKEGILPNSFYEA
SIILIPKPGRDTTKKENFRSISLINIDAKILNKILANRIQQHIKKRIHHDQVGFIPGMQG
WFNICKSINAIQHINRTKDKNHMIISIDAEKAFDKIQQPSC

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_3|1386_bp
atgatgatcatgatgacaatccccccggacaaagtgtccacaagggcaggagtgggcaag
gtgaaccccctgggcagttacaaattcaggggcttgtccaggattgcccttgtggctacc
tgctcatggttcagtgcccccccacgctccagcaatggatccagaggccagcccaagtgg
ctgcctagttcttttggactggggctgactctggtactctattggtgggaacacagtgca
atcaaacttgaactcaggattaagaaactcactcaaaaccgctcaactacatggaaactg
aacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatg
ttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggacacattcaaa
gcagtgtgtagagggaaatttatagcaataaatgcccataagagaaagcaggaaagatct
aaaattgacaccctaacatcacaattaaaagaactaaaaaagcaagagcaaacacattca
aaagctagcagaaggcaagaaataactaaaatcagagcagaagtgaaggaaatagagaca
caaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaa
attgatagaccactagcaagactcataaagaagaaaagagagaagaatcaaatagacgca
ataaaaaatgataaaggggatatcaccaccgatcccacggaaatacaaactaccatcaga
gaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatggataaattc
ctggacacatacaccatcccaagactaaaccaggaagaagttgaatctctgaatagacca
ataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccagga
ccagatggattcacagccgaattctaccaggggtacaaggaggaactggtatcattcctt
ctgaaactattccaatcaacagaaaaagagggaatcctccctaactcattttatgaggcc
agcatcatcctgataccaaagccgggcagagacacaaccaaaaaggagaattttagatca
atatccttgataaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccag
cagcacatcaaaaagcgtatccaccatgatcaagtgggcttcatccctgggatgcaaggc
tggttcaatatatgcaaatcaataaatgcaatccagcatataaacagaaccaaagacaaa
aatcacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaaccttca
tgctaa

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_4|653_aa
MAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVR
CPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLC
EPCREADHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKAALEGVSKDLQAR
YKAVLQEYGHEERRVQDELARSRKFFTGSLAEVEKSNSQVVEEQSYLLNIAEVQAVSRCD
YFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRT
VNVEDSWAMEATASAASTSVTFREMDMSPEEVVASPRASPAKQRGPEAASNIQQCLFLKK
MGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLS
FLGADLPNLTPLSVAMNCQGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPS
GQFVVTDVEGGKLWCFTVDRGSGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENR
QNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEIL
HFPKGGGYSVLIREGLTCPVGIALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_4|1962_bp
atggctgcagcagcagcttctcacctgaacctggatgccctccgggaagtgctagaatgc
cccatctgcatggagtccttcacagaagagcagctgcgtcccaagcttctgcactgtggc
cataccatctgccgccagtgcctggagaagctattggccagtagcatcaatggtgtccgc
tgtcccttttgcagcaagattacccgcataaccagcttgacccagctgacagacaatctg
acagtgctaaagatcattgatacagctgggctcagcgaggctgtggggctgctcatgtgt
cggtcctgtgggcggcgtctgccccggcaattctgccggagctgtggtttggtgttatgt
gagccctgccgggaggcagaccatcagcctcctggccactgtacactccctgtcaaagaa
gcagctgaggagcggcgtcgggactttggagagaagttaactcgtctgcgggaacttatg
ggggagctgcagcggcggaaggcagccttggaaggtgtctccaaggaccttcaggcaagg
tataaagcagttctccaggagtatgggcatgaggagcgcagggtccaggatgagctggct
cgctctcggaagttcttcacaggctctttggctgaagttgagaagtccaatagtcaagtg
gtagaggagcagagttacctgcttaacattgcagaggtgcaggctgtgtctcgctgtgac
tacttcctggccaagatcaagcaggcagatgtagcactactggaggagacagctgatgag
gaggagccagagctcactgccagcttgcctcgggagctcaccctgcaagatgtggagctc
cttaaggtaggtcatgttggccccctccaaattggacaagctgttaagaagccccggaca
gttaacgtggaagattcctgggccatggaggccacagcgtctgctgcctctacctctgtt
acttttagagagatggacatgagcccggaggaagtggttgccagccctagggcctcacct
gctaaacagcggggtcctgaggcagcctccaatatccagcagtgcctctttctcaagaag
atgggggccaaaggcagcactccaggaatgttcaatcttccagtcagtctctacgtgacc
agtcaaggtgaagtactagtcgctgaccgtggtaactatcgtatacaagtctttacccgc
aaaggctttttgaaggaaatccgccgcagccccagtggcattgatagctttgtgctaagc
ttccttggggcagatctacccaacctcactcctctctcagtggcaatgaactgccagggg
ctgattggtgtgactgacagctatgataactccctcaaggtatataccttggatggccac
tgcgtggcctgtcacaggagccagctgagcaaaccatggggtatcacagccttgccatct
ggccagtttgtagtaaccgatgtggaaggtggaaagctttggtgtttcacagttgatcga
ggatcaggggtggtcaaatacagctgcctatgtagtgctgtgcggcccaaatttgtcacc
tgtgatgctgagggcaccgtctacttcacccagggcttaggcctcaatctggagaatcgg
cagaatgagcaccacctggagggtggcttttccattggctctgtaggccctgatgggcag
ctgggtcgccagattagccacttcttctcggagaatgaggatttccgctgcattgctggc
atgtgtgtggatgctcgtggtgatctcatcgtggctgacagtagtcgcaaggaaattctc
cattttcctaagggtgggggctatagtgtccttattcgagagggacttacctgtccggtg
ggcatagccctaactcctaaggggcagctgctggtcttggactgttgggatcattgcatc
aagatctacagctaccatctgagaagatattccaccccatag

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_5|105_aa
MTIETSLERGVHKTGSCETSLTNVAEEDEPAEETEMQQSRGEVENHEDLVSPKQTQKVPH
TGSRQLCQSLLKGPVLPALDSTLLTCSVFQSPTDYWKAQNSHLVI

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_5|318_bp
atgaccatagaaacaagtctagaaagaggggtccataagacaggctcctgtgaaacttca
cttactaatgttgcagaagaggatgaacctgcagaggagacagagatgcaacagtccaga
ggggaagtagaaaatcatgaagatctagtatcaccgaaacaaacacagaaagtgcctcac
acaggaagcagacaactttgtcaaagcctactgaaaggcccagttcttcctgcattagat
tctaccttattgacctgttcggtgttccagtcccctacggactactggaaagctcagaat
tcccacctggtgatataa

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_6|423_aa
MDAAGAGVGAAGITQQGLLQVEGKVLEEALVTAAQLVLSVMTGQGIPVLIHTGKGDGGRS
GQGEDNVPLACNFFQFQGSQLPGQELVTAMPGMLNPQQSPLPRFGSLSAPLHRENNFIKD
FPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTVMGSLLPPKADMSTVCEEVLCFNGKA
PEPVIDPGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLAAGFTNVLKILTKESSREEL
LSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKGFLGEPKKILGSSLPRRT
QFLWKNNHLITKQTVSILSCGEAFILRKGQQISFSSDSQLLSELEFLRPGAGDQSLPTHL
VKVIPFPPQFSLPVKWVPLVSLDIRNKCPSLPRFHNDGTLATFMIWGNHWKLLESQGRWG
ECA

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_6|1272_bp
atggacgcagcaggggcgggggtgggggcagcgggcatcacacagcagggcctgttgcaa
gtggaggggaaagttctggaagaggccctggtgacagcagctcagcttgttctcagtgtt
atgacaggacaagggatcccagtgctaatacacacaggcaaaggagatggagggcgaagt
ggccaaggagaagataatgttcctctagcctgcaatttctttcaatttcagggatcgcaa
ttaccagggcaggagttagtaacagccatgcctggaatgcttaatcctcagcagtctcca
cttcctcgatttggcagtctctctgctcctctccacagggagaacaacttcatcaaggac
tttccccagctggccgatgggctgttggtgatcccgctgccggtggaggagcagtgccgg
ggggtcctctccgagccccttccagacctccaactgctcactgtgatggggagtttacta
cctcctaaagcagacatgtccacggtctgtgaggaggtgctgtgctttaatggaaaggcc
cctgaacctgtcattgatcctggagatatcaggtatgatgaggccatgggttaccccatg
gtgcagcagtggcgggtccggagcaacctctaccgtgtgaagctcagcaccatcaccctc
gcagcaggcttcactaatgttctcaagatcctgaccaaggagagcagtcgggaggagctg
ctgtccttcatccagcactatggctcccactacatcgcagaggccctctatggctcagag
ctcacctgcatcatccactttcccagcaagaaggtccagcagcagctgtggctccagtat
cagaaaggcttcttgggagaacccaagaagatcttgggttcttctctcccaagaagaact
caattcctttggaaaaacaatcacctcataaccaagcagacggtttccattctgtcctgt
ggtgaggcttttatcctcaggaagggccagcagatttcattttcctctgactctcagcta
ttatcagaattggaattcctcagaccaggtgctggagaccagtctctgcccactcacctt
gtgaaggttattccttttccacctcaattttctcttcctgtgaaatgggtacctctggtg
tccctggatattagaaacaaatgccctagccttcccaggtttcataatgatgggaccctg
gccacttttatgatctggggaaaccactggaaattactggaaagccaagggagatggggt
gaatgtgcctga

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_7|38_aa
METSSFGKLEVINNHGSLSDGFGLEKKFWVFEDGFRGR

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_7|117_bp
atggagaccagcagttttggcaaattggaggtcatcaataaccacggaagtctgagtgat
gggtttggcctggagaagaagttttgggtatttgaagatggttttcgggggcgctga

>gi568815589f:116597743_116799701|GENSCAN_predicted_peptide_8|75_aa
XVGGKKDDEVIVLTCHAVVQRTKVALKDIPTRERGESLWPLPLEQYHASAPIGSIVQPDL
VTTQIHTAQLESGAV

>gi568815589f:116597743_116799701|GENSCAN_predicted_CDS_8|228_bp
nntgtaggaggaaagaaagacgatgaagtgattgttcttacttgtcatgccgtggttcag
agaactaaagttgctctaaaggatatccctaccagagagaggggtgagagtctctggccc
ttacccttggagcagtaccatgcatcagcacctattggctccattgtccaaccagatttg
gtaacaacacaaattcacacagcacagcttgaatcaggggcagtttga